1) The document discusses a recent study that found focal amplifications in the VEGFA gene occur in 7-10% of hepatocellular carcinoma (HCC) cases. 2) The study showed that in HCC tumors with VEGFA amplification, VEGF-A stimulates the secretion of hepatocyte growth factor (HGF) by stromal cells, promoting tumor progression. 3) HCC patients with VEGFA amplification seemed to have a better response to the drug sorafenib, suggesting VEGFA amplification could predict sorafenib effectiveness.
Calcarea carbonica induces apoptosis in cancer cells in p53-dependent manner ...home
These observations delineate the significance of immuno-modulatory circuit during calcarea carbonicamediated
tumor apoptosis. The molecular mechanism identified may serve as a platform for involving calcarea
carbonica into immunotherapeutic strategies for effective tumor regression
Chemosensitivity Testing of Circulating Epithelial Tumor Cells (CETC) in Vitr...Peter Pachmann
ABSTRACT
Background: Chemotherapy is a mainstay of tumor therapy, however, it is predominantly applied according to empiri- cally developed recommendations derived from statistical relapse rates occurring years after the treatment in the adju- vant situation and from progression-free interval data in the metastatic situation, without any possibility of individually determining the efficacy in the adjuvant situation and with loss of time and quality of life in the metastatic situation if the drugs chosen are not effective. Here, we present a method to determine the efficiency of chemotherapeutic drugs using tumor cells circulating in blood as the part of the tumor actually available in the patient’s body for chemosensitiv- ity testing. Methodology/Principal Findings: After only red blood cell lysis, omitting any enrichment (analogous to other blood cell enumeration methods, including rare CD34 cells), the white cells comprising the circulating epithelial tumor cells (CETC) are exposed to the drugs in question in different concentrations and for different periods of time. Staining with a fluorescence-labeled anti-epithelial antibody detects both vital and dying tumor cells, distinguishing vital from dying cells through membrane permeability and nuclear staining with propidium iodide. Increasing percent- ages of dying tumor cells are observed dependent on time and concentration. The sensitivity can vary during therapy and was correlated with decrease or increase in CETC and clinical outcome. Conclusions/Significance: Thus, we are able to show that chemosensitivity testing of circulating tumor cells provides real-time information about the sensitivity of the tumor present in the patient, even at different times during therapy, and correlates with treatment success.
Calcarea carbonica induces apoptosis in cancer cells in p53-dependent manner ...home
These observations delineate the significance of immuno-modulatory circuit during calcarea carbonicamediated
tumor apoptosis. The molecular mechanism identified may serve as a platform for involving calcarea
carbonica into immunotherapeutic strategies for effective tumor regression
Chemosensitivity Testing of Circulating Epithelial Tumor Cells (CETC) in Vitr...Peter Pachmann
ABSTRACT
Background: Chemotherapy is a mainstay of tumor therapy, however, it is predominantly applied according to empiri- cally developed recommendations derived from statistical relapse rates occurring years after the treatment in the adju- vant situation and from progression-free interval data in the metastatic situation, without any possibility of individually determining the efficacy in the adjuvant situation and with loss of time and quality of life in the metastatic situation if the drugs chosen are not effective. Here, we present a method to determine the efficiency of chemotherapeutic drugs using tumor cells circulating in blood as the part of the tumor actually available in the patient’s body for chemosensitiv- ity testing. Methodology/Principal Findings: After only red blood cell lysis, omitting any enrichment (analogous to other blood cell enumeration methods, including rare CD34 cells), the white cells comprising the circulating epithelial tumor cells (CETC) are exposed to the drugs in question in different concentrations and for different periods of time. Staining with a fluorescence-labeled anti-epithelial antibody detects both vital and dying tumor cells, distinguishing vital from dying cells through membrane permeability and nuclear staining with propidium iodide. Increasing percent- ages of dying tumor cells are observed dependent on time and concentration. The sensitivity can vary during therapy and was correlated with decrease or increase in CETC and clinical outcome. Conclusions/Significance: Thus, we are able to show that chemosensitivity testing of circulating tumor cells provides real-time information about the sensitivity of the tumor present in the patient, even at different times during therapy, and correlates with treatment success.
Connexin-43 can delay early recurrence and metastasis in patients with hepati...Enrique Moreno Gonzalez
We studied the relationships among Cx43, CD105, and VEGF in specimens of hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) with different serum AFP levels with respect to recurrence and metastasis.
The influence of variants at the 9p21 locus on melanoma risk has been reported through investigation of CDKN2A variants through candidate gene approach as well as by genome wide association studies (GWAS).
A new assay for measuring chromosome instability (CIN) and identification of...Enrique Moreno Gonzalez
Aneuploidy is a feature of most cancer cells that is often accompanied by an elevated rate of chromosome mis-segregation termed chromosome instability (CIN). While CIN can act as a driver of cancer genome evolution and tumor progression, recent findings point to the existence of a threshold level beyond which CIN becomes a barrier to tumor growth and therefore can be exploited therapeutically. Drugs known to increase CIN beyond the therapeutic threshold are currently few in number, and the clinical promise of targeting the
CIN phenotype warrants new screening efforts. However, none of the existing methods, including the in vitro micronuclei (MNi) assay, developed to quantify CIN, is entirely satisfactory.
Variant G6PD levels promote tumor cell proliferation or apoptosis via the STA...Enrique Moreno Gonzalez
Glucose-6-phosphate dehydrogenase (G6PD), elevated in tumor cells, catalyzes the first reaction in the pentose-phosphate pathway. The regulation mechanism of G6PD and pathological change in human melanoma growth remains unknown.
Frizzled-8 receptor is activated by the Wnt-2 ligand in non-small cell lung c...Enrique Moreno Gonzalez
Wnt-2 plays an oncogenic role in cancer, but which Frizzled receptor(s) mediates the Wnt-2 signaling pathway in lung cancer remains unclear. We sought to (1) identify and evaluate the activation of Wnt-2 signaling through Frizzled-8 in non-small cell lung cancer, and (2) test whether a novel expression construct dominant negative Wnt-2 (dnhWnt-2) reduces tumor growth in a colony formation assay and in a xenograft mouse model.
HDAC4 and HDAC7 Promote Breast and Ovarian Cancer Cell Migration by Regulatin...CrimsonpublishersCancer
Breast and ovarian cancer have been remained as a highly malignant tumor among women, posing a serious threat to women health worldwide. In this study, we were aimed to investigate the underlying mechanism of breast and ovarian cancer cell migration. Wound healing assay showed that MDA-MB-231and C13* have higher migration potential compare with MCF-7 and OV2078 cells, as well as regulated epithelial-mesenchymal transition (EMT) marker. We found that HDAC4 and HADC7 mRNA are up regulated in MDA-MB-231 and C13* cells. Moreover, target HDAC4 and HDAC7 by TSA or shRNA block MDA-MB-231and C13* migration. These results reveal a new link between HDACs and EMT in the regulation of breast and ovarian cancer migration.
Mobile App User Acquisition - Launch & Growth Strategies[x]cube LABS
A detailed presentation on mobile app marketing, specific launch activities and user acquisition startegies, covering various aspects like campaign planning, Incent vs. non-incent, selecting networks, creative testing, buying models, programmatic buying for mobile, analytics & campaign measurement etc.
This was presented at NASSCOM Game Developers Conference - NGDC 2015 in Pune by Saptarshi Roy Chaudhury, VP Marketing, [x]cube LABS
Connexin-43 can delay early recurrence and metastasis in patients with hepati...Enrique Moreno Gonzalez
We studied the relationships among Cx43, CD105, and VEGF in specimens of hepatitis B virus (HBV)-related hepatocellular carcinoma (HCC) with different serum AFP levels with respect to recurrence and metastasis.
The influence of variants at the 9p21 locus on melanoma risk has been reported through investigation of CDKN2A variants through candidate gene approach as well as by genome wide association studies (GWAS).
A new assay for measuring chromosome instability (CIN) and identification of...Enrique Moreno Gonzalez
Aneuploidy is a feature of most cancer cells that is often accompanied by an elevated rate of chromosome mis-segregation termed chromosome instability (CIN). While CIN can act as a driver of cancer genome evolution and tumor progression, recent findings point to the existence of a threshold level beyond which CIN becomes a barrier to tumor growth and therefore can be exploited therapeutically. Drugs known to increase CIN beyond the therapeutic threshold are currently few in number, and the clinical promise of targeting the
CIN phenotype warrants new screening efforts. However, none of the existing methods, including the in vitro micronuclei (MNi) assay, developed to quantify CIN, is entirely satisfactory.
Variant G6PD levels promote tumor cell proliferation or apoptosis via the STA...Enrique Moreno Gonzalez
Glucose-6-phosphate dehydrogenase (G6PD), elevated in tumor cells, catalyzes the first reaction in the pentose-phosphate pathway. The regulation mechanism of G6PD and pathological change in human melanoma growth remains unknown.
Frizzled-8 receptor is activated by the Wnt-2 ligand in non-small cell lung c...Enrique Moreno Gonzalez
Wnt-2 plays an oncogenic role in cancer, but which Frizzled receptor(s) mediates the Wnt-2 signaling pathway in lung cancer remains unclear. We sought to (1) identify and evaluate the activation of Wnt-2 signaling through Frizzled-8 in non-small cell lung cancer, and (2) test whether a novel expression construct dominant negative Wnt-2 (dnhWnt-2) reduces tumor growth in a colony formation assay and in a xenograft mouse model.
HDAC4 and HDAC7 Promote Breast and Ovarian Cancer Cell Migration by Regulatin...CrimsonpublishersCancer
Breast and ovarian cancer have been remained as a highly malignant tumor among women, posing a serious threat to women health worldwide. In this study, we were aimed to investigate the underlying mechanism of breast and ovarian cancer cell migration. Wound healing assay showed that MDA-MB-231and C13* have higher migration potential compare with MCF-7 and OV2078 cells, as well as regulated epithelial-mesenchymal transition (EMT) marker. We found that HDAC4 and HADC7 mRNA are up regulated in MDA-MB-231 and C13* cells. Moreover, target HDAC4 and HDAC7 by TSA or shRNA block MDA-MB-231and C13* migration. These results reveal a new link between HDACs and EMT in the regulation of breast and ovarian cancer migration.
Mobile App User Acquisition - Launch & Growth Strategies[x]cube LABS
A detailed presentation on mobile app marketing, specific launch activities and user acquisition startegies, covering various aspects like campaign planning, Incent vs. non-incent, selecting networks, creative testing, buying models, programmatic buying for mobile, analytics & campaign measurement etc.
This was presented at NASSCOM Game Developers Conference - NGDC 2015 in Pune by Saptarshi Roy Chaudhury, VP Marketing, [x]cube LABS
Documento sobre la e-Administración en la Región de Murcia realizado en gran grupo por las estrellas de los grupos de TIC, grado en Educación Social, de la Universidad de Murcia.
Purpose: An inherited mutation in KRAS (LCS6-variant or rs61764370) results in altered control of the KRAS oncogene. We studied this biomarker’s correlation to anti-EGFR monoclonal antibody (mAb) therapy
response in patients with metastatic colorectal cancer.
Experimental Design: LCS6-variant and KRAS/BRAF mutational status was determined in 512 patients
with metastatic colorectal cancer treated with salvage anti-EGFR mAb therapy, and findings correlated with
outcome. Reporters were tested in colon cancer cell lines to evaluate the differential response of the LCS6-
variant allele to therapy exposure.
Results: In this study, 21.2% (109 of 512) of patients with metastatic colorectal cancer had the LCS6-
variant (TG/GG), which was found twice as frequently in the BRAF-mutated versus the wild-type (WT) group
(P = 0.03). LCS6-variant patients had significantly longer progression- free survival (PFS) with anti-EGFR
mAb monotherapy treatment in the whole cohort (16.85 vs. 7.85 weeks; P = 0.019) and in the double WT
(KRAS and BRAF) patient population (18 vs. 10.4 weeks; P = 0.039). Combination therapy (mAbs plus
chemotherapy) led to improved PFS and overall survival (OS) for nonvariant patients, and brought their
outcome to levels comparable with LCS6-variant patients receiving anti-EGFR mAb monotherapy. Combination
therapy did not lead to improved PFS or OS for LCS6-variant patients. Cell line studies confirmed a
unique response of the LCS6-variant allele to both anti-EGFR mAb monotherapy and chemotherapy.
Conclusions: LCS6-variant patients with metastatic colorectal cancer have an excellent response to anti-EGFR
mAb monotherapy, without any benefit from the addition of chemotherapy. These findings further confirm
the importance of thismutation as a biomarker of anti-EGFR mAb response in patients with metastatic colorectal cancer, and warrant further prospective confirmation.
Gastrointestinal Cancer: Research & Therapy is an open access, peer reviewed, scholarly journal dedicated to publish articles covering all areas of Gastrointestinal Cancer.
The journal aims to promote research communications and provide a forum for doctors, researchers, physicians and healthcare professionals to find most recent advances in all areas of Gastrointestinal Cancer. Gastrointestinal Cancer: Research & Therapy accepts original research articles, reviews, mini reviews, case reports and rapid communication covering all aspects of Gastrointestinal Cancer.
Gastrointestinal Cancer: Research & Therapy strongly supports the scientific up gradation and fortification in related scientific research community by enhancing access to peer reviewed scientific literary works. Austin Publishing Group also brings universally peer reviewed journals under one roof thereby promoting knowledge sharing, mutual promotion of multidisciplinary science.
Clinic Correlation and Prognostic Value of P4HB and GRP78 Expression in Gastr...daranisaha
Prolyl 4-hydroxylase, beta polypeptide (P4HB) and Glucose‑regulated protein 78 (GRP78) represent for poor prognosis of various cancers, while rare research investigate correlation of them. This study aimed to explore correlation and prognostic value of them in gastric cancer (GC).
Clinic Correlation and Prognostic Value of P4HB and GRP78 Expression in Gastr...eshaasini
Prolyl 4-hydroxylase, beta polypeptide (P4HB) and Glucose‑regulated protein 78 (GRP78) represent for poor prognosis of various cancers, while rare research investigate correlation of them. This study aimed to explore correlation and prognostic value of them in gastric cancer
Clinic Correlation and Prognostic Value of P4HB and GRP78 Expression in Gastr...semualkaira
Prolyl 4-hydroxylase, beta polypeptide (P4HB) and Glucose‑regulated protein 78 (GRP78) represent for poor prognosis of various cancers, while rare research investigate correlation of them. This study aimed to explore correlation and prognostic value of them in gastric cancer (GC).
Clinic Correlation and Prognostic Value of P4HB and GRP78 Expression in Gastr...semualkaira
: Prolyl 4-hydroxylase, beta polypeptide (P4HB)
and Glucose‑regulated protein 78 (GRP78) represent for poor
prognosis of various cancers, while rare research investigate correlation of them. This study aimed to explore correlation and prognostic value of them in gastric cancer
1. Focal Gains of VEGFA: Candidate Predictors
of Sorafenib Response in Hepatocellular Carcinoma
Josep M. Llovet1,2,3,*
1Mount Sinai Liver Cancer Program, Division of Liver Diseases, ICAHN School of Medicine at Mount Sinai, New York, NY 10029, USA
2HCC Translational Research Lab, BCLC Group, Liver Unit, IDIBAPS, CIBERehd, Hospital Clı´nic, University of Barcelona. Barcelona 08036,
Catalonia, Spain
3Institucio´ Catalana de Recerca i Estudis Avanc¸ ats, Barcelona 08036, Catalonia, Spain
*Correspondence: josep.llovet@mssm.edu
http://dx.doi.org/10.1016/j.ccr.2014.04.019
Focal amplifications in 6p21 containing the VEGFA locus occur in 7%–10% of hepatocellular carcinoma
(HCC). A recent paper describes how VEGF-A stimulates paracrine secretion of hepatocyte growth factor
by stromal cells, which induces tumor progression. HCC patients with VEGFA amplification are distinctly
sensitive to sorafenib.
Liver cancer is a major health problem
and the second cause of cancer death
after lung cancer. Hepatocellular carci-
noma (HCC) develops in patients with
underlying chronic liver inflammation
related to viral infection, alcohol, or meta-
bolic syndrome. Sorafenib remains the
only approved systemic drug for patients
at advanced stages of the disease (Llovet
et al., 2008). Molecular therapies targeting
signaling cascades involved in hepato-
carcinogenesis have been explored in
phase III clinical trials, but none of the
drugs tested showed positive results in
first- (brivanib, sunitinib, erlotinib, and
linifanib) or second-line therapy (brivanib
and everolimus) after progression on sor-
afenib (Llovet and Hernandez-Gea, 2014).
Thus, there is an urgent need to identify
molecular subclasses of HCC driven by
specific genetic aberrations that can be
effectively targeted recapitulating the
success of crizotininb in ALK-rearranged
lung cancer (Kwak et al., 2010) or vemur-
afenib in BRAF mutant melanoma.
Recent studies have provided a broad
picture of the mutational profile in HCC
and identified an average of 30–40 muta-
tions per tumor, among which 6–8 might
be drivers (Villanueva and Llovet, 2014;
Guichard et al., 2012). Common muta-
tions are described in the TERT promoter,
TP53, CTNNB1, ARID1A, and AXIN1.
Deep-sequencing studies confirmed
frequent TP53 and CTNNB1 mutations in
HCC and pointed to novel HCC-associ-
ated mutations in genes involved in
chromatin remodeling (ARID1A and
ARID2), ubiquitination (KEAP1), RAS/
MAPK signaling (RPS6KA3), oxidative
stress (NFE2L2), and the JAK/STAT
pathway (JAK1) (Villanueva and Llovet,
2014; Guichard et al., 2012) (Table 1).
Studies assessing copy number alter-
ations in HCC have consistently identified
high-level amplifications at 5%–10%
prevalence containing oncogenes in
11q13 and 6p21, whereas other more
common gains reported contain MYC
and MET (Villanueva and Llovet, 2014;
Guichard et al., 2012; Chiang et al.,
2008). We described amplifications of
11q13 in 5%–10% of tumors, pointing to
several candidate oncogenes including
CCND1 (Chiang et al., 2008). Subse-
quently, both CCND1 and FGF19 were
identified in experimental models as
bona fide oncogenes in HCC and poten-
tial targets for therapy (Sawey et al.,
2011). This finding prompted the design
of proof-of-concept trials testing FGFR4
inhibitors in patients with 11q13 focal
amplification containing FGF19. Similarly,
we defined high-level gains (more than
four copies) of 6p21 containing VEGFA
in 8% of cases out of 210 HCC patients
explored. Interestingly, there was a signif-
icant correlation between 6p21 gains and
VEGF-A mRNA expression (Chiang et al.,
2008). Now an elegant study by
Pikarsky’s group (Horwitz et al., 2014)
demonstrated that a subset of mouse
and human HCCs harbors VEGFA/Vegfa
genomic amplifications. They explored
the unique role of paracrine interactions
by which VEGF-A overexpression in
HCC cells leads to production of hepato-
cyte growth factor (HGF) by stroma that
reciprocally induce cancer cell prolifera-
tion. Interestingly, VEGF-A inhibition in
experimental models induced HGF down-
regulation, and patients with VEGFA
amplification responded better to the
multi-kinase inhibitor sorafenib.
Horwitz et al. (2014) found that 14% of
HCC tumors developing in a mouse
model of inflammation-driven cancer
(MDR2-deficient mice) harbored an am-
plicon in a region syntenic to the human
6p21 region (Chiang et al., 2008). They
confirmed VEGFA amplifications and/or
chromosome 6 polysomy in 11% of hu-
man HCCs (out of 187 cases tested). In
experimental models, there was a correla-
tion between VEGFA/Vegfa gains and
expression levels (mRNA and protein).
To elucidate the mechanism by which
VEGFA amplifications induced tumor pro-
gression, the authors first demonstrated
that animals with amplification showed a
higher vessel density, macrophage con-
tent, and enrichment for tumor-associ-
ated macrophage expression signatures.
A relevant finding of the investigation is
macrophage-tumor cell crosstalk. VEGFA
amplified tumors showed higher mRNA
levels, and nonneoplastic stromal cells in
the microenvironment had positive HGF
immunostaining. Using cells isolated
from the experimental HCC models, the
authors demonstrated that hepatocytes
overexpressed c-Met and macrophages
overexpressed VEGFRs. In vivo studies
showed that VEGF-A overexpression in
HCC cells induced upregulation of HGF,
mostly in macrophages, and led to
increased proliferation and pro-angio-
genic features. Functional confirmation
of the role of VEGF-A was obtained by
blocking it in MDR2-deficient mice and
560 Cancer Cell 25, May 12, 2014 ª2014 Elsevier Inc.
Cancer Cell
Previews
2. Hep3B xenograft models. A short course
of sorafenib treatment in animals with
VEGFA focal gains resulted in VEGF-A
inhibition, decreased HGF levels, and an
associated decrease in HCC proliferation.
This finding is consistent with the
decrease in HGF plasma levels observed
in HCC patients undergoing sorafenib
treatment (Llovet et al., 2012). Finally,
the authors retrospectively explored a
cohort of HCC patients undergoing resec-
tion who were further treated with sorafe-
nib. FISH-based selection of focal VEGFA
gains defined a group of patients with
better outcome, pointing to this biomarker
as a potential predictor of sorafenib
response.
Taken all together, Horwitz et al.’s
paper provides experimental confirmation
that VEGF-A has oncogenic properties in
hepatocarcinogenesis by inducing para-
crine secretion of HGF in stromal cells,
specifically macrophages, which in turn
lead to cancer cell proliferation. Notably,
it would have been relevant to explore if
a genetically-engineered mouse model
reproducing this genomic aberration in a
tissue-specific manner would have been
able to recapitulate this result. Similarly,
although the outcome of patients bearing
VEGFA amplification suggests that they
have a better response to sorafenib, the
retrospective nature of the results pre-
cludes any firm conclusion. However,
they nicely point toward further steps in
designing prospective and poof-of-
concept trials to confirm the hypothesis.
HCC is in need of additional molecular
treatments in first- and second-line ther-
apy and in the adjuvant setting. Reasons
for recent trial failures are heterogeneous
and include a lack of understanding of
critical drivers of tumor progression and
dissemination, liver toxicity, flaws in trial
design, or marginal antitumoral potency
(Llovet and Hernandez-Gea, 2014).
Ongoing trials testing drugs head-to-
head against sorafenib in all-comers
might have difficulties in achieving supe-
rior results in first-line therapy. Novel trials
are currently designed to test drugs in
biomarker-based HCC patient subpopu-
lations. In this regard, the consequences
of Horwitz et al.’s study are 2-fold. First,
whether VEGFA-amplified tumors repre-
sent a specific HCC subclass that
responds better to sorafenib requires
prospective confirmation with optimal
control for confounding/concurring fac-
tors. Phase III trials testing sorafenib
have proven beneficial in all subgroup
analysis of patients with advanced tumors
(Bruix et al., 2012). Thus, the question to
be explored is whether VEGFA amplified
tumors certainly respond even better to
this drug. Interestingly, a recent large
phase III study testing sorafenib in the
adjuvant setting did not meet the primary
end-point of recurrence-free survival.
Whether a subgroup of patients with
VEGFA amplification might benefit from
this drug in the adjuvant setting can now
be elucidated. Second, high-level
VEGFA-amplification can be used as a
biomarker in phase II pivotal proof-of-
concept studies testing drugs blocking
VEGF-A or VEGFR2 receptors. Other
drugs beyond sorafenib, such as ramu-
rafenib (a monoclonal antibody against
VEGFR2) or bevacizumab can be ex-
plored. In addition, dual VEGF-A and
c-Met inhibitors appear to be appealing
in this setting. Such inhibitors (e.g., cabo-
zantinib) are being tested in phase III trials
for second-line therapy.
We are facing a new era for testing
drugs in HCC as a consequence of
discovering novel oncogenic drivers (see
Table 1). Although nonspecific drugs will
still be explored targeting all patients,
pivotal proof-of-concept trials or those
with biomarker-based enrichment will
emerge for specific pockets of HCC
patients, which can completely change
the treatment paradigm. The study by
Pikarsky’s group provides relevant infor-
mation for moving toward this direction
(Horwitz et al., 2014).
ACKNOWLEDGMENTS
J.M.L. has grants from NIH-NIDDK
(1R01DK076986-01), National Institute of Health
(Spain) I+D Program (SAF-2010-16055), the
Samuel Waxman Cancer Research Foundation,
the European Commission Framework Pro-
gramme 7 (Heptromic, proposal number 259744),
and the Asociacio´ n Espan˜ ola para el Estudio del
Ca´ ncer.
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Table 1. Landscape of the Most Prevalent Mutations and High-Level Gene
Amplifications in Human Hepatocellular Carcinoma
Gene
Pathways/Gene Functions
Involved
Estimated Frequency Based on
Deep-Sequencing Studies (%)
Driver Genes Frequently Mutated in HCC
TERT promoter telomere stability 60
TP53 genome integrity 20–30
CTNNB1 WNT signaling 15–25
ARID1A chromatin remodeling 10–16
TTN chromosome segregation 4–10
NFE2L2 oxidative stress 6–10
JAK1 JAK/STAT signaling 0–9
Oncogenes/Tumor Suppressors Rarely Mutated in HCC
IDH1, IDH2 NAPDH metabolism <5
EGFR growth factor signaling <5
BRAF RAS/MAPK signaling <5
KRAS, NRAS RAS/MAPK signaling <5
PIK3CA AKT signaling <5
PTEN AKT signaling <5
Oncogenes Contained in High-Level Amplifications in HCC
FGF19 FGF signaling 5–10
CCND1 cell cycle 5–10
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