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Submicroscopic and asymptomatic
Plasmodium falciparum and P. vivax
infections are common in western Thailand
- the molecular and serological evidence -
Elisabeth Baum,
Ph.D.
Department of
Medicine
University of
California, Irvine
!  Mesoendemic for malaria
!  P. vivax (60%), P. falciparum (40%);
P. malariae and P. ovale
!  Control phase, entering pre-elimination
!  On track for >75% decrease in incidence in
2000-2015 (WHO World Malaria Report 2013)
Malaria in Thailand
Source: WHO South East Asia Regional Office – Malaria Statistics for Thailand 2013
0
1
2
3
4
5
6
7
1990
1991
1992
1993
1994
1995
1996
1997
1998
1999
2000
2001
2002
2003
2004
2005
2006
2007
2008
2009
2010
2011
2012
Annual Parasite Incidence
(malaria positives in 1,000 population at risk)
Successes Challenges
!  Drug resistance in P. falciparum
(artemisinin) and P. vivax (chloroquine)
!  Influx of refugees, migrant workers
and displaced persons camps along
borders
Malaria in Thailand
Tak Province
!  One of the highest Plasmodium
prevalences in the country
Source: WHO Thailand National Strategic Plan for Malaria Control and Elimination (2011)
Tak
Parasite prevalence is highest on border regions
Tak – Myanmar river border Refugees from Myanmar entering Tak
API per 1,000
Myanmar
Laos
Cambodia
Malaysia
Active Case Detection (ACD)
!  Weekly household visits
Mass Blood Surveys (MBS)
!  Quarterly cross-sectional
Malaria Surveillance in Tak Province
Passive Case Detection (PCD)
!  Hospital (1)
!  Malaria clinics (5)4 villages
Malaria at a Glance in Tak, Thailand
0
2
4
6
8
10
12
14
16
18
20
0
1000
2000
3000
4000
5000
6000
2011 2012 2013
%Smearpositiverate
Bloodsmearsexamined
0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0
500
1000
1500
2000
2500
3000
3500
4000
MBS1 MBS2 MBS3 MBS4 MBS5
%Smearpositiverate
Bloodsmearsexamined
Mass Blood Surveys
(4 sentinel villages)
Passive Case Detection
(1 hospital, 5 clinics)
2011 2012 2013
Low incidence of clinical cases and low parasite prevalence in the population…
…is Plasmodium really disappearing from Tak, or are we missing something?
!  qPCR screening and serology using a
protein microarray
!  Whole blood from finger-prick
!  Peak malaria season 2012 (May)
!  Samples from:
!  MBS from one village
!  PCD from hospital
!  Matched expert microscopy
Methods
Sample Sources
Community MBS
Mae Salid Noi
n=379
Samples collected
qPCR screening
Microarray serology
n=219
n=93
>11 y
>15 y
!  No symptoms during ±2 weeks from MBS
!  2 had fever on MBS (0.91%)
n=379
>0 y
Sample Sources
Community MBS
Mae Salid Noi
n=379
Samples collected
qPCR screening
Microarray serology
n=219
n=93
>11 y
>15 y
n=97
n=61
n=60
>15 y
>15 y
Hospital PCD
Tha Song Yang
>1 y>0 y
qPCR Screening
•  100-150µL of RBC pellet
•  Total DNA extraction and purification
•  Species-specific 18S rRNA gene
o  P. falciparum
o  P. vivax
•  Parasite detection limit 50 parasite/mL
Infectious Status of Samples from Community MBS
qPCR Microscopy
0
5
10
15
20
190
200
210
220
Resultbymethod(n=219)
•  11.4% infections
•  92% asymptomatic
o  (1 Pf, 1 Pv with fever)
•  100% submicroscopic
Negative Pv Pf
Infectious Status of Samples from Hospital PCD
Microscopy
Pf	
   Pv	
   Pf + Pv	
   Neg	
  
qPCR
Pf	
   5	
   0	
   0	
   2	
  
Pv	
   0	
   8	
   0	
   5	
  
Pf + Pv	
   2	
   5	
   0	
   0	
  
Neg	
   0	
   0	
   0	
   34	
  
0
10
20
30
40
qPCR Microscopy
Resultbymethod(n=61)
Negative Pv Pf Pf + Pv
•  44.3% Plasmodium infections
•  26% mixed-species
•  100% submicroscopic 2° species
Frequent submicroscopic asymptomatic infections amongst villagers,
and frequent cryptic mixed infections amongst malaria patients
Community (MBS) Hospital (PCD)
•  44.3% infections (32.8% by LM)
•  26% mixed-species (0% by LM)
•  100% submicroscopic 2° species
•  11.4% infections (0% by LM)
•  92% asymptomatic
•  100% submicroscopic
Protein Microarray Serology
•  Serology provides clues of past and current exposure
•  How serology correlates with qPCR results?
•  Protein microarray displaying 500 P. falciparum and
500 P. vivax proteins
Source of Samples
!  Community MBS (n=93, adults)
Lack of fever for 5 months (ACD records)
!  Hospital PCD (n=60, adults)
Limited information regarding symptoms and malaria history
(some febrile, some not)
Community (Asymptomatic) Malaria Clinic (Symptomatic)
Negative PF+ PV+ Negative PF+ PFPV+ PV+
P.falciparumproteins(n=281)P.vivaxproteins(n=177)
0 2 >5
Intensity of antibody binding to P. falciparum and P. vivax proteins, as measured by Z-scores of signal intensity
!  1,000 proteins
!  458 sero-reactive
Community (asymptomatic) Hospital (symptomatic)
281 P. falciparum
antigens
177 P. vivax
antigens
0
50
100
150
200
250
300
350
400
450
500
Countofsero-reactiveproteins(n=458)
Community MBS n=93 Hospital PCD n=60
(Healthy) (Symptomatic)
Number of antigens recognized by individual serum samples
Intensity of Antibody Binding
Community MBS Hospital PCD Community MBS Hospital PCD
P. falciparum antigens P. vivax antigens
Negative
PF +
PV +
Mixed sp.
Meansignalintensityand95%CI
Conclusions
!  Serological evidence of exposure in all individuals tested (100% sero-positivity)
!  Molecular screening detected an unexpected number of sub-microscopic
infections amongst asymptomatic villagers
!  Molecular screening detected cryptic mixed-species infections amongst malaria
patients, missed by microscopy
!  Implications for control/elimination and correct treatment?
Implications
Source: The malERA Consultative Group on Diagnoses and Diagnostics (2011) A Research Agenda for Malaria Eradication: Diagnoses and Diagnostics. PLoS Med 8(1)
Malaria in Tak is here?
The way forward?
Light microscopy
RDTs
Molecular (DNA)
Serology
Clinical diagnosis
High prevalence Low prevalence Pre-elimination Eliminated
Parasite density
Elisabeth Baum,
Ph.D.
Department of
Medicine
University of
California, Irvine
Funding
NIH Centers for Excellence in Malaria Research (ICEMR), Southeast Asia. U19
AI089672
UC Irvine Huw Davies, Aarti Jain, Eugenia Lo, Ming-Chieh Lee, Philip Felgner,
Guiyun Yan
Antigen Discovery Inc. Arlo Z. Randall, Douglas M. Molina, Xiaowu Liang
Mahidol Vivax Research Center Jetsumon Sattabongkot, Kirakorn Kialtibutr,
and field crew
Vector Borne Disease Training Center Jeeraphat Sirichaisinthop, and field crew
Pennsylvania State University Liwang Cui
*This work was submitted to Malaria Journal
Thank you!

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ASTMH2014 E_Baum

  • 1. Submicroscopic and asymptomatic Plasmodium falciparum and P. vivax infections are common in western Thailand - the molecular and serological evidence - Elisabeth Baum, Ph.D. Department of Medicine University of California, Irvine
  • 2. !  Mesoendemic for malaria !  P. vivax (60%), P. falciparum (40%); P. malariae and P. ovale !  Control phase, entering pre-elimination !  On track for >75% decrease in incidence in 2000-2015 (WHO World Malaria Report 2013) Malaria in Thailand
  • 3. Source: WHO South East Asia Regional Office – Malaria Statistics for Thailand 2013 0 1 2 3 4 5 6 7 1990 1991 1992 1993 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 Annual Parasite Incidence (malaria positives in 1,000 population at risk) Successes Challenges !  Drug resistance in P. falciparum (artemisinin) and P. vivax (chloroquine) !  Influx of refugees, migrant workers and displaced persons camps along borders Malaria in Thailand
  • 4. Tak Province !  One of the highest Plasmodium prevalences in the country Source: WHO Thailand National Strategic Plan for Malaria Control and Elimination (2011) Tak Parasite prevalence is highest on border regions Tak – Myanmar river border Refugees from Myanmar entering Tak API per 1,000 Myanmar Laos Cambodia Malaysia
  • 5. Active Case Detection (ACD) !  Weekly household visits Mass Blood Surveys (MBS) !  Quarterly cross-sectional Malaria Surveillance in Tak Province Passive Case Detection (PCD) !  Hospital (1) !  Malaria clinics (5)4 villages
  • 6. Malaria at a Glance in Tak, Thailand 0 2 4 6 8 10 12 14 16 18 20 0 1000 2000 3000 4000 5000 6000 2011 2012 2013 %Smearpositiverate Bloodsmearsexamined 0 0.1 0.2 0.3 0.4 0.5 0.6 0.7 0 500 1000 1500 2000 2500 3000 3500 4000 MBS1 MBS2 MBS3 MBS4 MBS5 %Smearpositiverate Bloodsmearsexamined Mass Blood Surveys (4 sentinel villages) Passive Case Detection (1 hospital, 5 clinics) 2011 2012 2013
  • 7. Low incidence of clinical cases and low parasite prevalence in the population… …is Plasmodium really disappearing from Tak, or are we missing something?
  • 8. !  qPCR screening and serology using a protein microarray !  Whole blood from finger-prick !  Peak malaria season 2012 (May) !  Samples from: !  MBS from one village !  PCD from hospital !  Matched expert microscopy Methods
  • 9. Sample Sources Community MBS Mae Salid Noi n=379 Samples collected qPCR screening Microarray serology n=219 n=93 >11 y >15 y !  No symptoms during ±2 weeks from MBS !  2 had fever on MBS (0.91%) n=379 >0 y
  • 10. Sample Sources Community MBS Mae Salid Noi n=379 Samples collected qPCR screening Microarray serology n=219 n=93 >11 y >15 y n=97 n=61 n=60 >15 y >15 y Hospital PCD Tha Song Yang >1 y>0 y
  • 11. qPCR Screening •  100-150µL of RBC pellet •  Total DNA extraction and purification •  Species-specific 18S rRNA gene o  P. falciparum o  P. vivax •  Parasite detection limit 50 parasite/mL
  • 12. Infectious Status of Samples from Community MBS qPCR Microscopy 0 5 10 15 20 190 200 210 220 Resultbymethod(n=219) •  11.4% infections •  92% asymptomatic o  (1 Pf, 1 Pv with fever) •  100% submicroscopic Negative Pv Pf
  • 13. Infectious Status of Samples from Hospital PCD Microscopy Pf   Pv   Pf + Pv   Neg   qPCR Pf   5   0   0   2   Pv   0   8   0   5   Pf + Pv   2   5   0   0   Neg   0   0   0   34   0 10 20 30 40 qPCR Microscopy Resultbymethod(n=61) Negative Pv Pf Pf + Pv •  44.3% Plasmodium infections •  26% mixed-species •  100% submicroscopic 2° species
  • 14. Frequent submicroscopic asymptomatic infections amongst villagers, and frequent cryptic mixed infections amongst malaria patients Community (MBS) Hospital (PCD) •  44.3% infections (32.8% by LM) •  26% mixed-species (0% by LM) •  100% submicroscopic 2° species •  11.4% infections (0% by LM) •  92% asymptomatic •  100% submicroscopic
  • 15. Protein Microarray Serology •  Serology provides clues of past and current exposure •  How serology correlates with qPCR results? •  Protein microarray displaying 500 P. falciparum and 500 P. vivax proteins Source of Samples !  Community MBS (n=93, adults) Lack of fever for 5 months (ACD records) !  Hospital PCD (n=60, adults) Limited information regarding symptoms and malaria history (some febrile, some not)
  • 16. Community (Asymptomatic) Malaria Clinic (Symptomatic) Negative PF+ PV+ Negative PF+ PFPV+ PV+ P.falciparumproteins(n=281)P.vivaxproteins(n=177) 0 2 >5 Intensity of antibody binding to P. falciparum and P. vivax proteins, as measured by Z-scores of signal intensity !  1,000 proteins !  458 sero-reactive Community (asymptomatic) Hospital (symptomatic) 281 P. falciparum antigens 177 P. vivax antigens
  • 17. 0 50 100 150 200 250 300 350 400 450 500 Countofsero-reactiveproteins(n=458) Community MBS n=93 Hospital PCD n=60 (Healthy) (Symptomatic) Number of antigens recognized by individual serum samples
  • 18. Intensity of Antibody Binding Community MBS Hospital PCD Community MBS Hospital PCD P. falciparum antigens P. vivax antigens Negative PF + PV + Mixed sp. Meansignalintensityand95%CI
  • 19. Conclusions !  Serological evidence of exposure in all individuals tested (100% sero-positivity) !  Molecular screening detected an unexpected number of sub-microscopic infections amongst asymptomatic villagers !  Molecular screening detected cryptic mixed-species infections amongst malaria patients, missed by microscopy !  Implications for control/elimination and correct treatment?
  • 20. Implications Source: The malERA Consultative Group on Diagnoses and Diagnostics (2011) A Research Agenda for Malaria Eradication: Diagnoses and Diagnostics. PLoS Med 8(1) Malaria in Tak is here? The way forward? Light microscopy RDTs Molecular (DNA) Serology Clinical diagnosis High prevalence Low prevalence Pre-elimination Eliminated Parasite density
  • 21. Elisabeth Baum, Ph.D. Department of Medicine University of California, Irvine Funding NIH Centers for Excellence in Malaria Research (ICEMR), Southeast Asia. U19 AI089672 UC Irvine Huw Davies, Aarti Jain, Eugenia Lo, Ming-Chieh Lee, Philip Felgner, Guiyun Yan Antigen Discovery Inc. Arlo Z. Randall, Douglas M. Molina, Xiaowu Liang Mahidol Vivax Research Center Jetsumon Sattabongkot, Kirakorn Kialtibutr, and field crew Vector Borne Disease Training Center Jeeraphat Sirichaisinthop, and field crew Pennsylvania State University Liwang Cui *This work was submitted to Malaria Journal Thank you!