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Accurate Cell Counters for
CAR T Therapy
From Discovery to Manufacturing
Accurate Cell Counting Methods, Fit for
Purpose, for CAR T Therapy
RESEARCH
DEVELOPMENT
MANUFACTURING
Accurate Cell Counting Methods, Fit for
Purpose, for CAR T Therapy
Fast Accurate Counting for Primary Samples
Overcoming morphology variability in cancer cell lines
Only one cell counter is needed throughout the (CAR)
Chimeric Antigen Receptor T-Cell Development
Improve consistency, accuracy and efficiency
Optimize Viral Vector Development with Image Cytometry
Improved transfection, transduction and viability
Accurate cell counting assay of apheresis materials -
suitable for stability program
Cell Counting Method Development Process
1
2
3
4
5
6
Accurate Cell Counters for CAR T Therapy
RESEARCH DEVELOPMENT MANUFACTURING
“Our Cellometer Auto 2000 has greatly improved the speed and accuracy of our
cell counting and has allowed us to analyze our cell samples in a variety of ways.
The AOPI feature has been integral in generating cell viable data for a few of our
new projects. The customer service team is also amazing! They are very
knowledgeable about their products and technology and are always available to
help us troubleshoot.” - NIH-NIDCD
“The Cellometer Auto 2000 and the AOPI Viastain gives us the ability to get an
accurate count of our live splenocytes while excluding the red blood cells.” - Eli Lilly
“…definitely the standard for cell counting. Results are consistent time and again,
the reliability is great when performing duplicate or triplicate counts…. I also enjoy
the ability to establish several different settings based on the type of cell, and
appreciate Nexcelom’s customer service!” - Cold Spring Harbor Laboratory
1 2 3 4 5 6
RESEARCH DEVELOPMENT MANUFACTURING
Fast Accurate Counting for Primary Samples
Mouse samples are variable in cell type and phenotypic characteristics.
• Cell counting accuracy can be affected by heterogeneous
cell populations
• Nuclear staining is critical for accurate cell counting
1
“The Cellometer Auto 2000 has greatly aided
the development of our tissue dissociation
assays. The unit allows fast quantification of
viable white blood cells from a heterogeneous
population following spleen, thymus, lymph
node, etc. dissolution which can then quickly
proceed to downstream flow-based analysis.
The time saved by this method has been
extremely valuable!” - Takeda Pharmaceuticals
Cellometer provides accurate
concentration and viability for cells that
vary in morphology and heterogeneity.
RESEARCH DEVELOPMENT MANUFACTURING
Overcoming Morphology Variability in Cancer Cell Lines
Advanced imaging and analysis algorithms are necessary to address the cell morphology
diversity in the large tumor cell lines. It is important for the cell counter to measure cells
with these characteristics accurately.
2
“We use the Cellometer Auto 2000 daily to count
cells and assess viability of cells derived from a
variety of sources. [We] perform a lot of cell line
work, and need accurate counts and viability
assessments before using the cells in downstream
assays” – Regeneron Pharmaceuticals
Cellometer provides accurate
concentration and viability for cells that
vary in morphology and heterogeneity.
RESEARCH DEVELOPMENT MANUFACTURING
Only One Cell Counter is
Needed Throughout CAR T
Development
Cell counters and image cytometers are
critical throughout the CAR T process
• Accurate cell counting from Leukopaks
• Measuring transduction efficiencies
• Determining efficacy of engineered
CAR T-cells
3
RESEARCH DEVELOPMENT MANUFACTURING
Optimized Viral Vector Development with Image Cytometer
Accurate cell number and viability
measurement is necessary for viral
vector development and downstream
manufacturing processes.
• Assure correct plating density,
cell confluence
• Determine transduction
efficiencies (No trypsinization
required)
• Verify cell number and viability
for plating
4
“The Cellometer Auto 2000 has made functional testing of T cells a
much quicker and simpler process than before! When the cell
concentration of each population in a 96 well plate must be
determined, it is hard to imagine having to count the cells by hand
and doing this in a timely manner. Great product!”
- University of Texas at Austin
RESEARCH DEVELOPMENT MANUFACTURING
Accurate Cell Counting Assay of
Apheresis Materials –
Suitable for Stability Program
Counting assay, of difficult to measure
apheresis material, for stability programs
including shipping, handling and storage
conditions.
• Measure viable and dead nucleated cells
• No RBC lysis necessary
• No staining-incubation period
5
“…We routinely process PBMCs from both fresh whole blood and from frozen stock. The Cellometer [Auto2000] has
made it much easier to get cell numbers and viability percentages for use in downstream applications …”
- Human Longevity, Inc
Manual / trypan blue method is not accurate for counting leukapheresis. RBCs are 3-12x the number of lymphocytes.
Proven Repeatability: 14 PMBC samples were tested using the Cellometer Auto2000. The resulting in a CV of < 6%.
RESEARCH DEVELOPMENT MANUFACTURING
Cell Counting Method Development Process
Counting is Crucial During All Stages of Cell-Based Product Development
6
Critical Process Parameters
• Cell growth and expansion
• Selection of target cells
• Pre-stimulation conditions
• Transduction conditions
Purity
• % CD3+ T cells
• %CAR T cells
• Residual tumor
burden
• Residual beads
Critical Quality Attributes
Safety
• Gram stain/sterility
• Mycoplasma
• Endotoxin level
• Copies of transgene insertion
• Replication Competent
Retrovirus/Lentivirus
Stability
• Shipping/Handling:
Cryopreserved CAR T
• Storage validation for
Apheresis materials:
Fresh/Frozen/Thawed
CAR T samples
• Vector
• Final product
Identity
• % CAR T cells
Potency
• In vitro Cytotoxic T
Lymphocyte
• Interferon-γ
secretion
Cellometer Cell Counting Celigo Imaging Cytometer
RESEARCH DEVELOPMENT MANUFACTURING
Cell Counting Method Development Process (continued)
Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development
is Crucial for Many of These Parameters
6
• Selection
• Development
• Optimization
PRE-CLINICAL PHASE I PHASE II PHASE III
• Methods
qualified
• Set tentative
release/stability
criteria
• Assay
optimization
• Consider
validation
acceptance
criteria
• Delineate/initiate
assay validation
parameters
• Full assay
validation by
licenser
(recommended
by Phase III)
• Biologics license
applications
≥70% cell viability is recommended for pre-clinical
safety studies and clinical dose.
Cellometer K2 can measure cell viability from 0%
viable to 100% viable cell population.
RESEARCH DEVELOPMENT MANUFACTURING
Cell Counting Method Development Process (continued)
Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development
is Crucial for Many of These Parameters
6
PHASE II
• Assay optimization
• Consider validation
acceptance criteria
• Delineate/initiate assay
validation parameters
“I am currently using the Cellometer K2 in our lab,
mostly to count T cells, PBMCs, and tumor cells. I use
them for cell culture, and later the cells are used for
further assays like ELISA and FACS. The instrument is
very accurate, especially with AO/PI.” - EMD Serono
• Linearity
• Accuracy
• Range
• Intermediate precision
• Precision: repeatability
and more …
Cellometer K2 Linearity Measurement
RESEARCH DEVELOPMENT MANUFACTURING
Cell Counting Method Development Process (continued)
Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development
is Crucial for Many of These Parameters
6
PHASE II
• Assay optimization
• Consider validation
acceptance criteria
• Delineate/initiate assay
validation parameters
Accuracy translates from cell lines to primary
samples.
• Linearity
• Accuracy
• Range
• Intermediate precision
• Precision: repeatability
and more …
Intermediate Precision: Instrument
Repeatability and Validation
RESEARCH DEVELOPMENT MANUFACTURING
Cell Counting Method Development Process (continued)
Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development
is Crucial for Many of These Parameters
6
PHASE II
• Assay optimization
• Consider validation
acceptance criteria
• Delineate/initiate assay
validation parameters
Cellometer cell counters have been facilitating
CAR T manufacturing with accurate cell counting
and analysis since 2010.
• Linearity
• Accuracy
• Range
• Intermediate precision
• Precision: repeatability
and more …
Precision: Repeatability of Cellometer K2
Ezeh PC, et al. PLoS One. 2014; 9(4):e93920
Xu H, et al. Toxicol Lett. 2016; 262:55-61
Rothenberg SM, et al. Cancer Res. 2010; 70(6): 2158-64
Singh H, et al. PLoS One. 2013; 8(5): e64138
Wang X, et al. Cancer Gene Ther 2015; 22(2):85-94
White KM, et al. ACS Infectious Diseases 2018; 4(2):146-157
Zhang Z, et al. BMC Biotechnology 2018; 18(1):4
Burchiel SW, et al. Inhal Toxicol. 2016; 28(2):61-70
Jin J, et al. J of Transl Med 2018; 16(1):13
Singh H, et al. Cancer Gene Ther. (2015) 22(2):95-100
Manuri, PVR, et al. Human Gene Therapy. 2010; 21:427-437
Innovation and Expertise in the Science of Cell Counting
Schedule a FREE on-line demonstration, on-site demonstration or technical seminar with a
Nexcelom Applications Specialist today.
Customer Support
Call 978-327-5340 or
E-mail info@nexcelom.com
For Europe
Call 44 (0) 161 232 4593 or
E-mail info@nexcelom.co.uk
For China
Call (+86) 21 5886 0038 or
E-mail support@nexcelom.com.cn

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Accurate Cell Counters for CAR T Therapy

  • 1. Accurate Cell Counters for CAR T Therapy From Discovery to Manufacturing
  • 2. Accurate Cell Counting Methods, Fit for Purpose, for CAR T Therapy RESEARCH DEVELOPMENT MANUFACTURING
  • 3. Accurate Cell Counting Methods, Fit for Purpose, for CAR T Therapy Fast Accurate Counting for Primary Samples Overcoming morphology variability in cancer cell lines Only one cell counter is needed throughout the (CAR) Chimeric Antigen Receptor T-Cell Development Improve consistency, accuracy and efficiency Optimize Viral Vector Development with Image Cytometry Improved transfection, transduction and viability Accurate cell counting assay of apheresis materials - suitable for stability program Cell Counting Method Development Process 1 2 3 4 5 6
  • 4. Accurate Cell Counters for CAR T Therapy RESEARCH DEVELOPMENT MANUFACTURING “Our Cellometer Auto 2000 has greatly improved the speed and accuracy of our cell counting and has allowed us to analyze our cell samples in a variety of ways. The AOPI feature has been integral in generating cell viable data for a few of our new projects. The customer service team is also amazing! They are very knowledgeable about their products and technology and are always available to help us troubleshoot.” - NIH-NIDCD “The Cellometer Auto 2000 and the AOPI Viastain gives us the ability to get an accurate count of our live splenocytes while excluding the red blood cells.” - Eli Lilly “…definitely the standard for cell counting. Results are consistent time and again, the reliability is great when performing duplicate or triplicate counts…. I also enjoy the ability to establish several different settings based on the type of cell, and appreciate Nexcelom’s customer service!” - Cold Spring Harbor Laboratory 1 2 3 4 5 6
  • 5. RESEARCH DEVELOPMENT MANUFACTURING Fast Accurate Counting for Primary Samples Mouse samples are variable in cell type and phenotypic characteristics. • Cell counting accuracy can be affected by heterogeneous cell populations • Nuclear staining is critical for accurate cell counting 1 “The Cellometer Auto 2000 has greatly aided the development of our tissue dissociation assays. The unit allows fast quantification of viable white blood cells from a heterogeneous population following spleen, thymus, lymph node, etc. dissolution which can then quickly proceed to downstream flow-based analysis. The time saved by this method has been extremely valuable!” - Takeda Pharmaceuticals Cellometer provides accurate concentration and viability for cells that vary in morphology and heterogeneity.
  • 6. RESEARCH DEVELOPMENT MANUFACTURING Overcoming Morphology Variability in Cancer Cell Lines Advanced imaging and analysis algorithms are necessary to address the cell morphology diversity in the large tumor cell lines. It is important for the cell counter to measure cells with these characteristics accurately. 2 “We use the Cellometer Auto 2000 daily to count cells and assess viability of cells derived from a variety of sources. [We] perform a lot of cell line work, and need accurate counts and viability assessments before using the cells in downstream assays” – Regeneron Pharmaceuticals Cellometer provides accurate concentration and viability for cells that vary in morphology and heterogeneity.
  • 7. RESEARCH DEVELOPMENT MANUFACTURING Only One Cell Counter is Needed Throughout CAR T Development Cell counters and image cytometers are critical throughout the CAR T process • Accurate cell counting from Leukopaks • Measuring transduction efficiencies • Determining efficacy of engineered CAR T-cells 3
  • 8. RESEARCH DEVELOPMENT MANUFACTURING Optimized Viral Vector Development with Image Cytometer Accurate cell number and viability measurement is necessary for viral vector development and downstream manufacturing processes. • Assure correct plating density, cell confluence • Determine transduction efficiencies (No trypsinization required) • Verify cell number and viability for plating 4 “The Cellometer Auto 2000 has made functional testing of T cells a much quicker and simpler process than before! When the cell concentration of each population in a 96 well plate must be determined, it is hard to imagine having to count the cells by hand and doing this in a timely manner. Great product!” - University of Texas at Austin
  • 9. RESEARCH DEVELOPMENT MANUFACTURING Accurate Cell Counting Assay of Apheresis Materials – Suitable for Stability Program Counting assay, of difficult to measure apheresis material, for stability programs including shipping, handling and storage conditions. • Measure viable and dead nucleated cells • No RBC lysis necessary • No staining-incubation period 5 “…We routinely process PBMCs from both fresh whole blood and from frozen stock. The Cellometer [Auto2000] has made it much easier to get cell numbers and viability percentages for use in downstream applications …” - Human Longevity, Inc Manual / trypan blue method is not accurate for counting leukapheresis. RBCs are 3-12x the number of lymphocytes. Proven Repeatability: 14 PMBC samples were tested using the Cellometer Auto2000. The resulting in a CV of < 6%.
  • 10. RESEARCH DEVELOPMENT MANUFACTURING Cell Counting Method Development Process Counting is Crucial During All Stages of Cell-Based Product Development 6 Critical Process Parameters • Cell growth and expansion • Selection of target cells • Pre-stimulation conditions • Transduction conditions Purity • % CD3+ T cells • %CAR T cells • Residual tumor burden • Residual beads Critical Quality Attributes Safety • Gram stain/sterility • Mycoplasma • Endotoxin level • Copies of transgene insertion • Replication Competent Retrovirus/Lentivirus Stability • Shipping/Handling: Cryopreserved CAR T • Storage validation for Apheresis materials: Fresh/Frozen/Thawed CAR T samples • Vector • Final product Identity • % CAR T cells Potency • In vitro Cytotoxic T Lymphocyte • Interferon-γ secretion Cellometer Cell Counting Celigo Imaging Cytometer
  • 11. RESEARCH DEVELOPMENT MANUFACTURING Cell Counting Method Development Process (continued) Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development is Crucial for Many of These Parameters 6 • Selection • Development • Optimization PRE-CLINICAL PHASE I PHASE II PHASE III • Methods qualified • Set tentative release/stability criteria • Assay optimization • Consider validation acceptance criteria • Delineate/initiate assay validation parameters • Full assay validation by licenser (recommended by Phase III) • Biologics license applications ≥70% cell viability is recommended for pre-clinical safety studies and clinical dose. Cellometer K2 can measure cell viability from 0% viable to 100% viable cell population.
  • 12. RESEARCH DEVELOPMENT MANUFACTURING Cell Counting Method Development Process (continued) Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development is Crucial for Many of These Parameters 6 PHASE II • Assay optimization • Consider validation acceptance criteria • Delineate/initiate assay validation parameters “I am currently using the Cellometer K2 in our lab, mostly to count T cells, PBMCs, and tumor cells. I use them for cell culture, and later the cells are used for further assays like ELISA and FACS. The instrument is very accurate, especially with AO/PI.” - EMD Serono • Linearity • Accuracy • Range • Intermediate precision • Precision: repeatability and more … Cellometer K2 Linearity Measurement
  • 13. RESEARCH DEVELOPMENT MANUFACTURING Cell Counting Method Development Process (continued) Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development is Crucial for Many of These Parameters 6 PHASE II • Assay optimization • Consider validation acceptance criteria • Delineate/initiate assay validation parameters Accuracy translates from cell lines to primary samples. • Linearity • Accuracy • Range • Intermediate precision • Precision: repeatability and more … Intermediate Precision: Instrument Repeatability and Validation
  • 14. RESEARCH DEVELOPMENT MANUFACTURING Cell Counting Method Development Process (continued) Establishing Early and Robust Cell Counting Procedures During Cell-Based Product Development is Crucial for Many of These Parameters 6 PHASE II • Assay optimization • Consider validation acceptance criteria • Delineate/initiate assay validation parameters Cellometer cell counters have been facilitating CAR T manufacturing with accurate cell counting and analysis since 2010. • Linearity • Accuracy • Range • Intermediate precision • Precision: repeatability and more … Precision: Repeatability of Cellometer K2
  • 15.
  • 16. Ezeh PC, et al. PLoS One. 2014; 9(4):e93920 Xu H, et al. Toxicol Lett. 2016; 262:55-61 Rothenberg SM, et al. Cancer Res. 2010; 70(6): 2158-64 Singh H, et al. PLoS One. 2013; 8(5): e64138 Wang X, et al. Cancer Gene Ther 2015; 22(2):85-94 White KM, et al. ACS Infectious Diseases 2018; 4(2):146-157 Zhang Z, et al. BMC Biotechnology 2018; 18(1):4 Burchiel SW, et al. Inhal Toxicol. 2016; 28(2):61-70 Jin J, et al. J of Transl Med 2018; 16(1):13 Singh H, et al. Cancer Gene Ther. (2015) 22(2):95-100 Manuri, PVR, et al. Human Gene Therapy. 2010; 21:427-437 Innovation and Expertise in the Science of Cell Counting Schedule a FREE on-line demonstration, on-site demonstration or technical seminar with a Nexcelom Applications Specialist today. Customer Support Call 978-327-5340 or E-mail info@nexcelom.com For Europe Call 44 (0) 161 232 4593 or E-mail info@nexcelom.co.uk For China Call (+86) 21 5886 0038 or E-mail support@nexcelom.com.cn