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5/2/2012
1
Session 21
Organic Chemistry, UNAM School of Medicine1
Carboxylic Acids &Carboxylic Acids &Carboxylic Acids &Carboxylic Acids &
Carboxylic Acid Derivatives ICarboxylic Acid Derivatives ICarboxylic Acid Derivatives ICarboxylic Acid Derivatives I
Dr L.H.A. Prins (Ph.D.)
Dept. of Pharmacy
UNAM
Learning Outcomes
2
By the end of this session, the student should be able to:
Understand what a carbonyl group, acyl group &
carbonyl compound is
Understand the importance of carboxylic acids & its
derivatives
Describe the structure of carboxylic acids & its derivatives
Name carboxylic acids & its derivatives according to IUPAC
system
Organic Chemistry, UNAM School of Medicine
Carbonyl
Compounds I
Carbonyl
Compounds I
5/2/2012
2
TerminologyTerminologyTerminologyTerminology
3
Carbonyl group – a C double
bonded to an O
Carbonyl compound – compound
containing a carbonyl group
Acyl group – carbonyl group
attached to an alkyl group or to an
aryl group
Organic Chemistry, UNAM School of Medicine
TerminologyTerminologyTerminologyTerminology
4
Carbonyl compounds:Divided into 2 classes
Class I carbonyl compounds = acyl group is attached to an atom
or a group that can be replaced by another group
Organic Chemistry, UNAM School of Medicine
5/2/2012
3
TerminologyTerminologyTerminologyTerminology
5
Carbonyl compounds:Divided into 2 classes
Class II carbonyl compounds = acyl group is attached to a
group that can not be readily replaced by another group
Organic Chemistry, UNAM School of Medicine
Carboxylic AcidsCarboxylic AcidsCarboxylic AcidsCarboxylic Acids
6 Organic Chemistry, UNAM School of Medicine
5/2/2012
4
Importance??Importance??Importance??Importance??
7
Carboxylic acids – found widely throughout nature
(S)-(+)-Lactic acid: Responsible
for the burning sensation felt in
muscles during anaerobic exercise
Oxalic acid: Contained in spinach
& other leafy green vegetables
Organic Chemistry, UNAM School of Medicine
Importance??Importance??Importance??Importance??
8
Carboxylic acids – found widely throughout nature
Succinic acid & citric acid: Important intermediates in the
citric acid cycle
Prostaglandins: Hormones that stimulate inflammation, cause
hypertension & produce pain
5/2/2012
5
Importance??Importance??Importance??Importance??
9
Carboxylic acids – found widely throughout nature
p-Aminobenzoic acid: Used in
sunscreens; absorbs
short-wavelength UV light
Gamma-aminobutanoic acid (GABA):
A prominant inhibitory neurotransmitter
Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids
& derivatives& derivatives& derivatives& derivatives
10
Functional group of carboxylic acids consists of a C=O with -OH
bonded to the same C
Carboxyl group is usually written -COOH
Aliphatic acids - alkyl group bonded to -COOH
Aromatic acids - aryl group bonded to -COOH
Organic Chemistry, UNAM School of Medicine
5/2/2012
6
Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids
& derivatives& derivatives& derivatives& derivatives
11
Carbonyl carbon in carboxylic acids & carboxylic acid
derivatives is sp2 hybridised
Uses its 3 x sp2 orbitals to form σ bonds to the carbonyl O, the α-C &
a substituent (R)
3 atoms attached to carbonyl C are in the same plane & their bond
angles are each approximately 120°
Carbonyl oxygen is also sp2 hybridised
1 of its sp2 orbitals forms a σ bond with the carbonyl C & each of the
other 2 sp2 orbitals contains a lone pair e-
Remaining p orbital of carbonyl O overlaps with remaining p orbital
of carbonyl C to form a π bond
Organic Chemistry, UNAM School of Medicine
Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids
& derivatives& derivatives& derivatives& derivatives
12 Organic Chemistry, UNAM School of Medicine
5/2/2012
7
Structure + bonding of carboxylic acidsStructure + bonding of carboxylic acidsStructure + bonding of carboxylic acidsStructure + bonding of carboxylic acids
& derivatives& derivatives& derivatives& derivatives
13
The two most important structural features of the carbonyl
group are:
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
14
Common names - carboxylic acids having 6 or fewer C are
frequently called by their common names.These names were
chosen by early chemists to describe some feature of the
compound, usually its origin
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
8
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
15
Common names - position of a substituent is designated by a
lowercase Greek letter & the carbonyl C is not given a designation.
C adjacent to carbonyl C is the α-C, C adjacent to α-C is the β-C
& so on
Organic Chemistry, UNAM School of Medicine
C
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
16
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
9
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
17
Systematic names (IUPAC) - named by replacing the terminal
“e”of the alkane name with “oic acid”
Position of a substituent is designated by a #.
Carbonyl C of a carboxylic acid is always carbon # 1.
Organic Chemistry, UNAM School of Medicine
C
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
18
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
10
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
19
Systematic names (IUPAC) …cont’d
- Cyclic carboxylic acids:Add “carboxylic acid-” to the name of the
cyclic compound
Examples:
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
20
Systematic names (IUPAC) …cont’d
-Aromatic acids: Named as derivatives of benzoic acid
Examples:
Organic Chemistry, UNAM School of Medicine
benzoic acid p-aminobenzoic acid
(4-aminobenzoic acid)
o-hydroxybenzoic acid
(2-hydroxybenzoic
acid)
5/2/2012
11
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
21
Systematic names (IUPAC) …cont’d
-Aliphatic dicarboxylic acids: Named by adding the suffix “-dioic
acid” to the name of the parent alkane
Examples:
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids
22
Systematic names (IUPAC) …cont’d
- Cyclic dicarboxylic acids: Carboxyl groups are treated as
substituents on the cyclic structure
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
12
EstersEstersEstersEsters
23 Organic Chemistry, UNAM School of Medicine
Importance??Importance??Importance??Importance??
24
Esters – also commonly found in nature
Many of the fragrances of flowers & fruits are due to esters
Organic Chemistry, UNAM School of Medicine
5/2/2012
13
Structure of estersStructure of estersStructure of estersStructure of esters
25
Esters (R-COOR') have an −OR' group in place of the −OH
group of a carboxylic acid (R-COOH)
Esters can be cyclic or acyclic
Hybridisation structure: Refer to Slides 11-12
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters
26
Common names - name of the group (R') attached to the
carboxyl oxygen (from an alcohol) is stated first, followed by the
name of the acid, with “ic acid” replaced by “ate”
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
14
Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters
27
Common names - cyclic esters are called lactones. Derived from
the common name of the carboxylic acid, which designates the length
of the carbon chain, & a Greek letter to indicate the C to which the
carboxyl oxygen is attached
β-lactones = 4-membered ring lactones
γ-lactones = 5-membered ring lactones
δ-lactones = 6-membered ring lactones
Examples:
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters
28
Systematic names (IUPAC) - named by naming the R’ group
(from an alcohol) as an alkyl group first followed by the acid name
(the R-C group) with ending “–oate”
Remember:
“Alkyl alkanoate”
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
15
Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters
29
Systematic names (IUPAC) - cyclic esters are named as“2-
oxacycloalkanones”. Replace “alk”-part with amount of C’s in
ring
“oxa” = Used to designate the O atom
Examples:
Organic Chemistry, UNAM School of Medicine
AmidesAmidesAmidesAmides
30 Organic Chemistry, UNAM School of Medicine
5/2/2012
16
Importance??Importance??Importance??Importance??
31
Amino acids are linked together
by amide bonds to form
peptides & proteins
Caffeine: Naturally occurring amide
found in cocoa & coffee beans
Penicillin G (‘normal’ penicillin):
Compound with two amide bonds
Organic Chemistry, UNAM School of Medicine
Structure of amidesStructure of amidesStructure of amidesStructure of amides
32
Amides (R-CONH2) have a −NH2, −NHR or −NR2 group in place
of the −OH group of a carboxylic acid (R-COOH)
Amides can be cyclic or acyclic
Hybridisation structure: Refer to Slides 11-12
Organic Chemistry, UNAM School of Medicine
5/2/2012
17
Structure of amidesStructure of amidesStructure of amidesStructure of amides
33
Amide classification:
primary (1°) = 1 x C group bonded to amide N atom
secondary (2°) = 2 x C groups bonded to amide N atom
tertiary (3°) = 3 x C groups bonded to amide N atom
Organic Chemistry, UNAM School of Medicine
Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides
34
Common & Systematic names (IUPAC) - use the acid name,
replacing “oic acid” or “ic acid” with “amide.” For acids ending
with “carboxylic acid,”“ylic acid” is replaced with “amide”
Entire name – written as one word!
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
18
Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides
35
Common & Systematic names (IUPAC) …cont’d
- For substituents bonded to the N - name of the substituent is
stated 1st followed by the name of the amide
- If there is more than 1 substituent bonded to the N, they are stated
alphabetically
- Name of each substituent bonded to N is preceded by an“N” (in
italics) indicating that the group is bonded to a N rather than to a
C
Organic Chemistry, UNAM School of Medicine
Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides
36
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
19
Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides
37
Common & Systematic names (IUPAC) …cont’d
- Cyclic amides are called “lactams” in common nomenclature
- Nomenclature is similar to that of lactones
Organic Chemistry, UNAM School of Medicine
Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides
38
Common & Systematic names (IUPAC) …cont’d
- Named as “2-azacycloalkanones” in systematic nomenclature
- “aza” = Used to designate the N atom
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
20
Acyl HalidesAcyl HalidesAcyl HalidesAcyl Halides
39 Organic Chemistry, UNAM School of Medicine
Structure of acyl halidesStructure of acyl halidesStructure of acyl halidesStructure of acyl halides
40
Acyl halides – not commonly found in nature, because of their
high reactivity
Acyl halides (R-COX) have a −X in place of the −OH group of a
carboxylic acid (R-COOH)
Acyl chlorides & acyl bromides - most common acyl halides
Hybridisation structure: Refer to Slides 11-12
Organic Chemistry, UNAM School of Medicine
5/2/2012
21
Nomenclature ofNomenclature ofNomenclature ofNomenclature of acyl halidesacyl halidesacyl halidesacyl halides
41
Common & Systematic names (IUPAC) - named by using the
acid name & replacing “ic acid” with “yl chloride”(or “yl
bromide”)
-Acids ending with “carboxylic acid” – replace “carboxylic acid”
with “carbonyl chloride” (or “bromide”)
Examples:
Organic Chemistry, UNAM School of Medicine
Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides
42
Acyl halides = activated derivatives of carboxylic acids
Halogen atom (X) of an acyl halide inductively withdraws e- density
from carbonyl C, enhancing its electrophilic nature
This makes acyl halides particularly reactive toward nucleophilic
acyl substitution
Halide ion - serves as a good leaving group
Organic Chemistry, UNAM School of Medicine
5/2/2012
22
Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides
43
Electrophile = “electron-lover”
= reagent/atom attracted to electrons
= accepts an electron pair from a nucleophile
= By definition: Lewis acids
= + charged species such as H+, NH4
+or atom that
carries a partial positive charge
Nucleophile = “nucleus-lover”
= donates an electron pair to an electrophile to
form a chemical bond
= By definition: Lewis bases
= Molecules or ions with a free pair of electrons
Organic Chemistry, UNAM School of Medicine
Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides
44
Nucleophile = can be either − charged (:Nu-) or neutral (:Nu)
= if neutral: Usually carries a H atom that can
subsequently be eliminated (:Nu-H)
Examples:
Organic Chemistry, UNAM School of Medicine
Some − charged
nucleophiles:
Some neutral
nucleophiles:
5/2/2012
23
Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides
45
Nucleophilic acyl substitution:
Organic Chemistry, UNAM School of Medicine
Acid AnhydridesAcid AnhydridesAcid AnhydridesAcid Anhydrides
46 Organic Chemistry, UNAM School of Medicine
5/2/2012
24
Structure of acid anhydridesStructure of acid anhydridesStructure of acid anhydridesStructure of acid anhydrides
47
Acid anhydrides – not commonly found in nature, because of
their high reactivity
Loss of H2O from 2 carboxylic acid molecules -Acid anhydride
((R-CO)2-O)
“Anhydride” means “without water”
Hybridisation structure: Refer to Slides 11-12
Organic Chemistry, UNAM School of Medicine
Structure of acid anhydridesStructure of acid anhydridesStructure of acid anhydridesStructure of acid anhydrides
48
Types of acid anhydrides:
Symmetrical anhydride - the 2 COOH molecules forming the
acid anhydride are the same
Mixed anhydride - the 2 COOH molecules forming the acid
anhydride are different
Organic Chemistry, UNAM School of Medicine
5/2/2012
25
Nomenclature ofNomenclature ofNomenclature ofNomenclature of acid anhydridesacid anhydridesacid anhydridesacid anhydrides
49
Common & Systematic names (IUPAC)
- Symmetrical anhydrides: Named by using the acid name &
replacing “acid” with “anhydride”
- Mixed anhydrides: Named by stating the names of both acids in
alphabetical order, followed by “anhydride”
Examples:
Organic Chemistry, UNAM School of Medicine
Reactivity ofReactivity ofReactivity ofReactivity of acid anhydridesacid anhydridesacid anhydridesacid anhydrides
50
Acid anhydrides = activated derivatives of carboxylic acids (like
acyl halides)
However, acid anhydrides are not as reactive as acyl halides
In acyl chloride - Cl atom activates carbonyl (C=O) group &
serves as a leaving group
In acid anhydride - carboxylate group serves these functions
Organic Chemistry, UNAM School of Medicine
5/2/2012
26
NitrilesNitrilesNitrilesNitriles
51 Organic Chemistry, UNAM School of Medicine
Structure of nitrilesStructure of nitrilesStructure of nitrilesStructure of nitriles
52
Nitriles – compounds that contain a cyano (C=N) functional
group
– considered carboxylic acid derivatives because, like all
Class I carbonyl compounds, they react with H2O
(hydrolyse) to form carboxylic acids
Organic Chemistry, UNAM School of Medicine
5/2/2012
27
Structure of nitrilesStructure of nitrilesStructure of nitrilesStructure of nitriles
53
Nitriles:
– C & N of cyano group are sp hybridised
– R-C-N bond angle is 180° (linear)
– Nitrile structure - similar to that of a terminal alkyne (propyne)
– N atom of nitrile has lone pair e- instead of alkyne H
Organic Chemistry, UNAM School of Medicine
Nomenclature ofNomenclature ofNomenclature ofNomenclature of nitrilesnitrilesnitrilesnitriles
54
Common & Systematic names (IUPAC)
- Common names:The suffix “-ic acid” is replaced by the suffix
“-onitrile”
- Systematic names: Constructed from the alkane name, with the
suffix “-nitrile” added
Examples:
Organic Chemistry, UNAM School of Medicine
5/2/2012
28
Nomenclature ofNomenclature ofNomenclature ofNomenclature of nitrilesnitrilesnitrilesnitriles
55
Common & Systematic names (IUPAC) …cont’d
- Substituent nomenclature: If it is seen as a substituent in a
molecule, it is called “cyano”
Example:
Organic Chemistry, UNAM School of Medicine
Thank you
56
END
Organic Chemistry, UNAM School of Medicine

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(21) session 21 carboxylic acids & carboxylic acid derivatives i

  • 1. 5/2/2012 1 Session 21 Organic Chemistry, UNAM School of Medicine1 Carboxylic Acids &Carboxylic Acids &Carboxylic Acids &Carboxylic Acids & Carboxylic Acid Derivatives ICarboxylic Acid Derivatives ICarboxylic Acid Derivatives ICarboxylic Acid Derivatives I Dr L.H.A. Prins (Ph.D.) Dept. of Pharmacy UNAM Learning Outcomes 2 By the end of this session, the student should be able to: Understand what a carbonyl group, acyl group & carbonyl compound is Understand the importance of carboxylic acids & its derivatives Describe the structure of carboxylic acids & its derivatives Name carboxylic acids & its derivatives according to IUPAC system Organic Chemistry, UNAM School of Medicine Carbonyl Compounds I Carbonyl Compounds I
  • 2. 5/2/2012 2 TerminologyTerminologyTerminologyTerminology 3 Carbonyl group – a C double bonded to an O Carbonyl compound – compound containing a carbonyl group Acyl group – carbonyl group attached to an alkyl group or to an aryl group Organic Chemistry, UNAM School of Medicine TerminologyTerminologyTerminologyTerminology 4 Carbonyl compounds:Divided into 2 classes Class I carbonyl compounds = acyl group is attached to an atom or a group that can be replaced by another group Organic Chemistry, UNAM School of Medicine
  • 3. 5/2/2012 3 TerminologyTerminologyTerminologyTerminology 5 Carbonyl compounds:Divided into 2 classes Class II carbonyl compounds = acyl group is attached to a group that can not be readily replaced by another group Organic Chemistry, UNAM School of Medicine Carboxylic AcidsCarboxylic AcidsCarboxylic AcidsCarboxylic Acids 6 Organic Chemistry, UNAM School of Medicine
  • 4. 5/2/2012 4 Importance??Importance??Importance??Importance?? 7 Carboxylic acids – found widely throughout nature (S)-(+)-Lactic acid: Responsible for the burning sensation felt in muscles during anaerobic exercise Oxalic acid: Contained in spinach & other leafy green vegetables Organic Chemistry, UNAM School of Medicine Importance??Importance??Importance??Importance?? 8 Carboxylic acids – found widely throughout nature Succinic acid & citric acid: Important intermediates in the citric acid cycle Prostaglandins: Hormones that stimulate inflammation, cause hypertension & produce pain
  • 5. 5/2/2012 5 Importance??Importance??Importance??Importance?? 9 Carboxylic acids – found widely throughout nature p-Aminobenzoic acid: Used in sunscreens; absorbs short-wavelength UV light Gamma-aminobutanoic acid (GABA): A prominant inhibitory neurotransmitter Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids & derivatives& derivatives& derivatives& derivatives 10 Functional group of carboxylic acids consists of a C=O with -OH bonded to the same C Carboxyl group is usually written -COOH Aliphatic acids - alkyl group bonded to -COOH Aromatic acids - aryl group bonded to -COOH Organic Chemistry, UNAM School of Medicine
  • 6. 5/2/2012 6 Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids & derivatives& derivatives& derivatives& derivatives 11 Carbonyl carbon in carboxylic acids & carboxylic acid derivatives is sp2 hybridised Uses its 3 x sp2 orbitals to form σ bonds to the carbonyl O, the α-C & a substituent (R) 3 atoms attached to carbonyl C are in the same plane & their bond angles are each approximately 120° Carbonyl oxygen is also sp2 hybridised 1 of its sp2 orbitals forms a σ bond with the carbonyl C & each of the other 2 sp2 orbitals contains a lone pair e- Remaining p orbital of carbonyl O overlaps with remaining p orbital of carbonyl C to form a π bond Organic Chemistry, UNAM School of Medicine Structure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acidsStructure of carboxylic acids & derivatives& derivatives& derivatives& derivatives 12 Organic Chemistry, UNAM School of Medicine
  • 7. 5/2/2012 7 Structure + bonding of carboxylic acidsStructure + bonding of carboxylic acidsStructure + bonding of carboxylic acidsStructure + bonding of carboxylic acids & derivatives& derivatives& derivatives& derivatives 13 The two most important structural features of the carbonyl group are: Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 14 Common names - carboxylic acids having 6 or fewer C are frequently called by their common names.These names were chosen by early chemists to describe some feature of the compound, usually its origin Examples: Organic Chemistry, UNAM School of Medicine
  • 8. 5/2/2012 8 Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 15 Common names - position of a substituent is designated by a lowercase Greek letter & the carbonyl C is not given a designation. C adjacent to carbonyl C is the α-C, C adjacent to α-C is the β-C & so on Organic Chemistry, UNAM School of Medicine C Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 16 Examples: Organic Chemistry, UNAM School of Medicine
  • 9. 5/2/2012 9 Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 17 Systematic names (IUPAC) - named by replacing the terminal “e”of the alkane name with “oic acid” Position of a substituent is designated by a #. Carbonyl C of a carboxylic acid is always carbon # 1. Organic Chemistry, UNAM School of Medicine C Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 18 Examples: Organic Chemistry, UNAM School of Medicine
  • 10. 5/2/2012 10 Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 19 Systematic names (IUPAC) …cont’d - Cyclic carboxylic acids:Add “carboxylic acid-” to the name of the cyclic compound Examples: Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 20 Systematic names (IUPAC) …cont’d -Aromatic acids: Named as derivatives of benzoic acid Examples: Organic Chemistry, UNAM School of Medicine benzoic acid p-aminobenzoic acid (4-aminobenzoic acid) o-hydroxybenzoic acid (2-hydroxybenzoic acid)
  • 11. 5/2/2012 11 Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 21 Systematic names (IUPAC) …cont’d -Aliphatic dicarboxylic acids: Named by adding the suffix “-dioic acid” to the name of the parent alkane Examples: Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of carboxylic acidscarboxylic acidscarboxylic acidscarboxylic acids 22 Systematic names (IUPAC) …cont’d - Cyclic dicarboxylic acids: Carboxyl groups are treated as substituents on the cyclic structure Examples: Organic Chemistry, UNAM School of Medicine
  • 12. 5/2/2012 12 EstersEstersEstersEsters 23 Organic Chemistry, UNAM School of Medicine Importance??Importance??Importance??Importance?? 24 Esters – also commonly found in nature Many of the fragrances of flowers & fruits are due to esters Organic Chemistry, UNAM School of Medicine
  • 13. 5/2/2012 13 Structure of estersStructure of estersStructure of estersStructure of esters 25 Esters (R-COOR') have an −OR' group in place of the −OH group of a carboxylic acid (R-COOH) Esters can be cyclic or acyclic Hybridisation structure: Refer to Slides 11-12 Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters 26 Common names - name of the group (R') attached to the carboxyl oxygen (from an alcohol) is stated first, followed by the name of the acid, with “ic acid” replaced by “ate” Examples: Organic Chemistry, UNAM School of Medicine
  • 14. 5/2/2012 14 Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters 27 Common names - cyclic esters are called lactones. Derived from the common name of the carboxylic acid, which designates the length of the carbon chain, & a Greek letter to indicate the C to which the carboxyl oxygen is attached β-lactones = 4-membered ring lactones γ-lactones = 5-membered ring lactones δ-lactones = 6-membered ring lactones Examples: Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters 28 Systematic names (IUPAC) - named by naming the R’ group (from an alcohol) as an alkyl group first followed by the acid name (the R-C group) with ending “–oate” Remember: “Alkyl alkanoate” Examples: Organic Chemistry, UNAM School of Medicine
  • 15. 5/2/2012 15 Nomenclature ofNomenclature ofNomenclature ofNomenclature of estersestersestersesters 29 Systematic names (IUPAC) - cyclic esters are named as“2- oxacycloalkanones”. Replace “alk”-part with amount of C’s in ring “oxa” = Used to designate the O atom Examples: Organic Chemistry, UNAM School of Medicine AmidesAmidesAmidesAmides 30 Organic Chemistry, UNAM School of Medicine
  • 16. 5/2/2012 16 Importance??Importance??Importance??Importance?? 31 Amino acids are linked together by amide bonds to form peptides & proteins Caffeine: Naturally occurring amide found in cocoa & coffee beans Penicillin G (‘normal’ penicillin): Compound with two amide bonds Organic Chemistry, UNAM School of Medicine Structure of amidesStructure of amidesStructure of amidesStructure of amides 32 Amides (R-CONH2) have a −NH2, −NHR or −NR2 group in place of the −OH group of a carboxylic acid (R-COOH) Amides can be cyclic or acyclic Hybridisation structure: Refer to Slides 11-12 Organic Chemistry, UNAM School of Medicine
  • 17. 5/2/2012 17 Structure of amidesStructure of amidesStructure of amidesStructure of amides 33 Amide classification: primary (1°) = 1 x C group bonded to amide N atom secondary (2°) = 2 x C groups bonded to amide N atom tertiary (3°) = 3 x C groups bonded to amide N atom Organic Chemistry, UNAM School of Medicine Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides 34 Common & Systematic names (IUPAC) - use the acid name, replacing “oic acid” or “ic acid” with “amide.” For acids ending with “carboxylic acid,”“ylic acid” is replaced with “amide” Entire name – written as one word! Examples: Organic Chemistry, UNAM School of Medicine
  • 18. 5/2/2012 18 Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides 35 Common & Systematic names (IUPAC) …cont’d - For substituents bonded to the N - name of the substituent is stated 1st followed by the name of the amide - If there is more than 1 substituent bonded to the N, they are stated alphabetically - Name of each substituent bonded to N is preceded by an“N” (in italics) indicating that the group is bonded to a N rather than to a C Organic Chemistry, UNAM School of Medicine Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides 36 Examples: Organic Chemistry, UNAM School of Medicine
  • 19. 5/2/2012 19 Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides 37 Common & Systematic names (IUPAC) …cont’d - Cyclic amides are called “lactams” in common nomenclature - Nomenclature is similar to that of lactones Organic Chemistry, UNAM School of Medicine Nomenclature of amidesNomenclature of amidesNomenclature of amidesNomenclature of amides 38 Common & Systematic names (IUPAC) …cont’d - Named as “2-azacycloalkanones” in systematic nomenclature - “aza” = Used to designate the N atom Examples: Organic Chemistry, UNAM School of Medicine
  • 20. 5/2/2012 20 Acyl HalidesAcyl HalidesAcyl HalidesAcyl Halides 39 Organic Chemistry, UNAM School of Medicine Structure of acyl halidesStructure of acyl halidesStructure of acyl halidesStructure of acyl halides 40 Acyl halides – not commonly found in nature, because of their high reactivity Acyl halides (R-COX) have a −X in place of the −OH group of a carboxylic acid (R-COOH) Acyl chlorides & acyl bromides - most common acyl halides Hybridisation structure: Refer to Slides 11-12 Organic Chemistry, UNAM School of Medicine
  • 21. 5/2/2012 21 Nomenclature ofNomenclature ofNomenclature ofNomenclature of acyl halidesacyl halidesacyl halidesacyl halides 41 Common & Systematic names (IUPAC) - named by using the acid name & replacing “ic acid” with “yl chloride”(or “yl bromide”) -Acids ending with “carboxylic acid” – replace “carboxylic acid” with “carbonyl chloride” (or “bromide”) Examples: Organic Chemistry, UNAM School of Medicine Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides 42 Acyl halides = activated derivatives of carboxylic acids Halogen atom (X) of an acyl halide inductively withdraws e- density from carbonyl C, enhancing its electrophilic nature This makes acyl halides particularly reactive toward nucleophilic acyl substitution Halide ion - serves as a good leaving group Organic Chemistry, UNAM School of Medicine
  • 22. 5/2/2012 22 Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides 43 Electrophile = “electron-lover” = reagent/atom attracted to electrons = accepts an electron pair from a nucleophile = By definition: Lewis acids = + charged species such as H+, NH4 +or atom that carries a partial positive charge Nucleophile = “nucleus-lover” = donates an electron pair to an electrophile to form a chemical bond = By definition: Lewis bases = Molecules or ions with a free pair of electrons Organic Chemistry, UNAM School of Medicine Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides 44 Nucleophile = can be either − charged (:Nu-) or neutral (:Nu) = if neutral: Usually carries a H atom that can subsequently be eliminated (:Nu-H) Examples: Organic Chemistry, UNAM School of Medicine Some − charged nucleophiles: Some neutral nucleophiles:
  • 23. 5/2/2012 23 Reactivity ofReactivity ofReactivity ofReactivity of acyl halidesacyl halidesacyl halidesacyl halides 45 Nucleophilic acyl substitution: Organic Chemistry, UNAM School of Medicine Acid AnhydridesAcid AnhydridesAcid AnhydridesAcid Anhydrides 46 Organic Chemistry, UNAM School of Medicine
  • 24. 5/2/2012 24 Structure of acid anhydridesStructure of acid anhydridesStructure of acid anhydridesStructure of acid anhydrides 47 Acid anhydrides – not commonly found in nature, because of their high reactivity Loss of H2O from 2 carboxylic acid molecules -Acid anhydride ((R-CO)2-O) “Anhydride” means “without water” Hybridisation structure: Refer to Slides 11-12 Organic Chemistry, UNAM School of Medicine Structure of acid anhydridesStructure of acid anhydridesStructure of acid anhydridesStructure of acid anhydrides 48 Types of acid anhydrides: Symmetrical anhydride - the 2 COOH molecules forming the acid anhydride are the same Mixed anhydride - the 2 COOH molecules forming the acid anhydride are different Organic Chemistry, UNAM School of Medicine
  • 25. 5/2/2012 25 Nomenclature ofNomenclature ofNomenclature ofNomenclature of acid anhydridesacid anhydridesacid anhydridesacid anhydrides 49 Common & Systematic names (IUPAC) - Symmetrical anhydrides: Named by using the acid name & replacing “acid” with “anhydride” - Mixed anhydrides: Named by stating the names of both acids in alphabetical order, followed by “anhydride” Examples: Organic Chemistry, UNAM School of Medicine Reactivity ofReactivity ofReactivity ofReactivity of acid anhydridesacid anhydridesacid anhydridesacid anhydrides 50 Acid anhydrides = activated derivatives of carboxylic acids (like acyl halides) However, acid anhydrides are not as reactive as acyl halides In acyl chloride - Cl atom activates carbonyl (C=O) group & serves as a leaving group In acid anhydride - carboxylate group serves these functions Organic Chemistry, UNAM School of Medicine
  • 26. 5/2/2012 26 NitrilesNitrilesNitrilesNitriles 51 Organic Chemistry, UNAM School of Medicine Structure of nitrilesStructure of nitrilesStructure of nitrilesStructure of nitriles 52 Nitriles – compounds that contain a cyano (C=N) functional group – considered carboxylic acid derivatives because, like all Class I carbonyl compounds, they react with H2O (hydrolyse) to form carboxylic acids Organic Chemistry, UNAM School of Medicine
  • 27. 5/2/2012 27 Structure of nitrilesStructure of nitrilesStructure of nitrilesStructure of nitriles 53 Nitriles: – C & N of cyano group are sp hybridised – R-C-N bond angle is 180° (linear) – Nitrile structure - similar to that of a terminal alkyne (propyne) – N atom of nitrile has lone pair e- instead of alkyne H Organic Chemistry, UNAM School of Medicine Nomenclature ofNomenclature ofNomenclature ofNomenclature of nitrilesnitrilesnitrilesnitriles 54 Common & Systematic names (IUPAC) - Common names:The suffix “-ic acid” is replaced by the suffix “-onitrile” - Systematic names: Constructed from the alkane name, with the suffix “-nitrile” added Examples: Organic Chemistry, UNAM School of Medicine
  • 28. 5/2/2012 28 Nomenclature ofNomenclature ofNomenclature ofNomenclature of nitrilesnitrilesnitrilesnitriles 55 Common & Systematic names (IUPAC) …cont’d - Substituent nomenclature: If it is seen as a substituent in a molecule, it is called “cyano” Example: Organic Chemistry, UNAM School of Medicine Thank you 56 END Organic Chemistry, UNAM School of Medicine