experiment of
1. isolation of microbes from soil
2. enumeration of microorganism
3. identification of microorganism
(must includes background, topic, objective, research question , ways to solve it)
experiment of
1. isolation of microbes from soil
2. enumeration of microorganism
3. identification of microorganism
(must includes background, topic, objective, research question , ways to solve it)
Plant Tissue Culture - Medium preparation, Techniques, Types and Benefits.Shovan Das
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GraphRAG is All You need? LLM & Knowledge GraphGuy Korland
Guy Korland, CEO and Co-founder of FalkorDB, will review two articles on the integration of language models with knowledge graphs.
1. Unifying Large Language Models and Knowledge Graphs: A Roadmap.
https://arxiv.org/abs/2306.08302
2. Microsoft Research's GraphRAG paper and a review paper on various uses of knowledge graphs:
https://www.microsoft.com/en-us/research/blog/graphrag-unlocking-llm-discovery-on-narrative-private-data/
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Here is something new! In our next Connector Corner webinar, we will demonstrate how you can use a single workflow to:
Create a campaign using Mailchimp with merge tags/fields
Send an interactive Slack channel message (using buttons)
Have the message received by managers and peers along with a test email for review
But there’s more:
In a second workflow supporting the same use case, you’ll see:
Your campaign sent to target colleagues for approval
If the “Approve” button is clicked, a Jira/Zendesk ticket is created for the marketing design team
But—if the “Reject” button is pushed, colleagues will be alerted via Slack message
Join us to learn more about this new, human-in-the-loop capability, brought to you by Integration Service connectors.
And...
Speakers:
Akshay Agnihotri, Product Manager
Charlie Greenberg, Host
The Art of the Pitch: WordPress Relationships and SalesLaura Byrne
Clients don’t know what they don’t know. What web solutions are right for them? How does WordPress come into the picture? How do you make sure you understand scope and timeline? What do you do if sometime changes?
All these questions and more will be explored as we talk about matching clients’ needs with what your agency offers without pulling teeth or pulling your hair out. Practical tips, and strategies for successful relationship building that leads to closing the deal.
Elevating Tactical DDD Patterns Through Object CalisthenicsDorra BARTAGUIZ
After immersing yourself in the blue book and its red counterpart, attending DDD-focused conferences, and applying tactical patterns, you're left with a crucial question: How do I ensure my design is effective? Tactical patterns within Domain-Driven Design (DDD) serve as guiding principles for creating clear and manageable domain models. However, achieving success with these patterns requires additional guidance. Interestingly, we've observed that a set of constraints initially designed for training purposes remarkably aligns with effective pattern implementation, offering a more ‘mechanical’ approach. Let's explore together how Object Calisthenics can elevate the design of your tactical DDD patterns, offering concrete help for those venturing into DDD for the first time!
Kubernetes & AI - Beauty and the Beast !?! @KCD Istanbul 2024Tobias Schneck
As AI technology is pushing into IT I was wondering myself, as an “infrastructure container kubernetes guy”, how get this fancy AI technology get managed from an infrastructure operational view? Is it possible to apply our lovely cloud native principals as well? What benefit’s both technologies could bring to each other?
Let me take this questions and provide you a short journey through existing deployment models and use cases for AI software. On practical examples, we discuss what cloud/on-premise strategy we may need for applying it to our own infrastructure to get it to work from an enterprise perspective. I want to give an overview about infrastructure requirements and technologies, what could be beneficial or limiting your AI use cases in an enterprise environment. An interactive Demo will give you some insides, what approaches I got already working for real.
Accelerate your Kubernetes clusters with Varnish CachingThijs Feryn
A presentation about the usage and availability of Varnish on Kubernetes. This talk explores the capabilities of Varnish caching and shows how to use the Varnish Helm chart to deploy it to Kubernetes.
This presentation was delivered at K8SUG Singapore. See https://feryn.eu/presentations/accelerate-your-kubernetes-clusters-with-varnish-caching-k8sug-singapore-28-2024 for more details.
GDG Cloud Southlake #33: Boule & Rebala: Effective AppSec in SDLC using Deplo...James Anderson
Effective Application Security in Software Delivery lifecycle using Deployment Firewall and DBOM
The modern software delivery process (or the CI/CD process) includes many tools, distributed teams, open-source code, and cloud platforms. Constant focus on speed to release software to market, along with the traditional slow and manual security checks has caused gaps in continuous security as an important piece in the software supply chain. Today organizations feel more susceptible to external and internal cyber threats due to the vast attack surface in their applications supply chain and the lack of end-to-end governance and risk management.
The software team must secure its software delivery process to avoid vulnerability and security breaches. This needs to be achieved with existing tool chains and without extensive rework of the delivery processes. This talk will present strategies and techniques for providing visibility into the true risk of the existing vulnerabilities, preventing the introduction of security issues in the software, resolving vulnerabilities in production environments quickly, and capturing the deployment bill of materials (DBOM).
Speakers:
Bob Boule
Robert Boule is a technology enthusiast with PASSION for technology and making things work along with a knack for helping others understand how things work. He comes with around 20 years of solution engineering experience in application security, software continuous delivery, and SaaS platforms. He is known for his dynamic presentations in CI/CD and application security integrated in software delivery lifecycle.
Gopinath Rebala
Gopinath Rebala is the CTO of OpsMx, where he has overall responsibility for the machine learning and data processing architectures for Secure Software Delivery. Gopi also has a strong connection with our customers, leading design and architecture for strategic implementations. Gopi is a frequent speaker and well-known leader in continuous delivery and integrating security into software delivery.
Slack (or Teams) Automation for Bonterra Impact Management (fka Social Soluti...Jeffrey Haguewood
Sidekick Solutions uses Bonterra Impact Management (fka Social Solutions Apricot) and automation solutions to integrate data for business workflows.
We believe integration and automation are essential to user experience and the promise of efficient work through technology. Automation is the critical ingredient to realizing that full vision. We develop integration products and services for Bonterra Case Management software to support the deployment of automations for a variety of use cases.
This video focuses on the notifications, alerts, and approval requests using Slack for Bonterra Impact Management. The solutions covered in this webinar can also be deployed for Microsoft Teams.
Interested in deploying notification automations for Bonterra Impact Management? Contact us at sales@sidekicksolutionsllc.com to discuss next steps.
Encryption in Microsoft 365 - ExpertsLive Netherlands 2024Albert Hoitingh
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UiPath Test Automation using UiPath Test Suite series, part 4DianaGray10
Welcome to UiPath Test Automation using UiPath Test Suite series part 4. In this session, we will cover Test Manager overview along with SAP heatmap.
The UiPath Test Manager overview with SAP heatmap webinar offers a concise yet comprehensive exploration of the role of a Test Manager within SAP environments, coupled with the utilization of heatmaps for effective testing strategies.
Participants will gain insights into the responsibilities, challenges, and best practices associated with test management in SAP projects. Additionally, the webinar delves into the significance of heatmaps as a visual aid for identifying testing priorities, areas of risk, and resource allocation within SAP landscapes. Through this session, attendees can expect to enhance their understanding of test management principles while learning practical approaches to optimize testing processes in SAP environments using heatmap visualization techniques
What will you get from this session?
1. Insights into SAP testing best practices
2. Heatmap utilization for testing
3. Optimization of testing processes
4. Demo
Topics covered:
Execution from the test manager
Orchestrator execution result
Defect reporting
SAP heatmap example with demo
Speaker:
Deepak Rai, Automation Practice Lead, Boundaryless Group and UiPath MVP
1. Isolation and Characterization of Mycobacteriophages
Isolated from Tropical Soils of Puerto Rico.
Charlene N. Rivera-Bonet, Mónica Rivera-Torres
ABSTRACT
Phages are often studied and characterized in order to investigate their potential functions in
terms of scientific or medicinal innovations. A sample was collected from the soil using aseptic
techniques. Then it was enriched with an M. smegmatis culture and incubated for 24 hours at
37ºC. From the enrichment the supernatant is later filtered and used for purification. After
purifying three times using an agar plate and M. smegmatis culture the plaques found in the plate
(clear spots) indicate the phages location. The next steps to continuing this project are dilutions
and creating a web pattern.
Introduction
Bacteriophages, better known as phages, are
viruses that infect bacteria. Phages are made
up of a head that contains the genetic
material, and a tail, which they use to inject
their DNA to the host cell. They have two
types of reproduction, by which they are
classified. One is the lytic life cycle, which
is carried by lytic bacteriophages. They lyse
the host as a normal part of their life cycle.
The temperate phages carry out the
Lysogenic life cycle which consists of the
integration of the phage’s DNA into the
host’s genome. As the bacteria divide, it
divides (Kaiser 2012)..
Mycobacteriophage is a virus that only
infects bacteria belonging to the
Mycobacteria genus. Examples of this type
of phage are tuberculosis and M. smegmatis.
Mycobacterium smegmatis has become the
most important bacteria for biological
studies. It is easy to be cultured and
reproduces quickly. It is non-pathogenic to
humans or other animals. Its basic structure
and metabolism are common to other
mycobacteria, including ones that can cause
devastating diseases (Higa 2013).
Several advantages can be found when
studying bacteriophages. By studying
phages novel genes can be discovered, and
new therapies against antibiotic resistant
pathogenic bacteria can be developed.
Hypothesis
We will be able to find bacteriophages in
our soil sample because of its condition and
the location it was collected from.
2. Materials and Methods
The materials used throughout this
investigation included sterile spoon, test
tubes and GPS for sample collection, and
Agar plates, Top Agar, sterilization filters,
syringes, phage buffer, M. smegmatis
culture, micropipettes, pipettes, vortexer,
centrifuge and incubators for the rest of the
experiment.
Soil Sample Collection
Soil sample was collected using a sterile
spoon and test tube. Data about the area the
sample was taken from was annotated.
Enrichment
The first step after the soil sample collection
was the Enrichment. For the enrichment o.5
grams of soil sample were measured and
added into 50mL of solution containing 8mL
sterile water, 1mL sterile 10x broth, 1mL
AD supplement,0.1mL of 100mM CaCl2.
1ml of late log/early stationary phase M.
smegmatis culture (48 hour culture) were
also added to the flask. Afterwards it was
incubated at 37º C, shaking at 220rpm for a
24 hours period.
Harvesting
After 24 hours of incubation, the sample
spun at 3,000rpm for 100 minutes to pellet
particulate matter, including most of the
bacterial cells. Then poured supernatant
from centrifuged sample to a 50mL conical
tube, filter-sterilized enrichment sample,
capped and label the rube
Plaque Streak
Using a sterile wooden stick the enrichment
was streaked back and forth across the top
third or the agar plate without lifting it.
Cover up the petri dish and discard the
wooden stick.
This process was repeated using a new
wooden stick; streak the adjacent un-
streaked portion of the agar making sure to
overlap on the first few strokes, beginning in
the area streaked before.
For the remaining portion of the plate, the
streaking process was repeated on the last
portion of the plate.
Next 4.5mL of Top Agar were added to
0.5mL of M. smegmatis, using serological
pipet to carefully dispense it onto the most
dilute area of the plate and allow it to spread
across the plate to the most concentrated
areas. Then covered the plate and allowed
the Top Agar to become hard. After it
became hard it was incubated at 37ºC and to
be checked the next day.
Plaque Purification:
In order to obtain pure phage, three plaque
purifications were made.
After following the correct asceptic
techniques, a plaque from the plate was
chosen and picked with a 100uL
micropipette tip. Then, it was transferred to
a sterile microtube with 100uL of Phage
Buffer. Using a sterile wooden stick, the
solution inside the microtube into a petri
dish was streaked on the plate, following the
same streaking steps discussed before.
4.5mL of Top Agar were added to 0.5mL of
M. smegmati,and using a serological pipet it
3. was carefully dispensed onto the most dilute
area of the plate and allow it to spread
across the plate to the most concentrated
areas. The plate was covered and the Top
Agar was allowed to become hard.
Afterwards, it was incubated at 37ºC and
checked the next day.
Results
Sample Collection
The soil sample was collected February 18,
2013 at 7:30pm. The conditions were 73°F,
1 inch deep, in a somewhat moist area, 6
inches away from cement sidewalk, 2 feet
from a house and 10 feet from a large tree.
The exact GPS location was 18.23657 N
66.04429 W in Caguas, Puerto Rico.
Enrichment, Harvesting and Plaque
Purification
Phages were found on the first try. Since we
had the opportunity to name our phage, we
picked the name Monchar. After the
enrichment was made, the first plaque
purification came out well, as can be seen in
Figure1.
Fig 1. 1st
Plaque Purification.
The second and third plaque purification
took more time and trials. The second
plaque purification was done three times.
The first time it did not come out right,
because the bacteria were defective. The
second time it got full of fungus and the
third time, shown in Figure 2, it was
successful.
Fig 2. 2nd
Plaque Purification.
The third plaque purification had to be done
six times. Each time something different
happened. The first second and third time
nothing happened. The last three times
bacteria colonies formed. An example of
this is shown in Figure 3.
Fig 3. 3rd
Plaque Purification example.
4. The second plaque purification, was
repeated but nothing came out as can be
seen in Figure 4.
Fig 4. 2nd
Plaque Purification repetition.
Conclusion
Phages were found in our soil sample
collection and our hypothesis was proven
correct. Due to a series of misfortunate
events including defective bacteria,
unwanted colonies or fungus, we only
reached the second plaque purification. The
soil from where the phages were collected
was fertilized with compost. The type of soil
may have had a lot to do with the presence
of phages since compost is so rich in
nutrients and allows bacteria to flourish.
This organic matter that fertilized the soil
was from the fallen leaves of tree located a
short distance from the collection area.
Another factor that could have affected the
discovery was the temperature. The soil was
collected during a cloudy and partially
humid day.
Next steps would involve Web Patterns, or
Dilutions, and High Titter Assay. Further
research can be done in order to characterize
this phage and conclude its functionality in
the field of medicine.
References
WiseGeek Conjecture Corporation
[Internet]. [2013]. WiseGeek Conjecture
Corporation; [cited 2013May14]. Available
at: http://www.wisegeek.com/what-is-
mycobacterium-smegmatis.htm
Doc Kaiser's Microbiology Home Page
[Internet] [2012]. Doc Kaiser's
Microbiology Home Page; [cited
2013May14]. Available at:
http://faculty.ccbcmd.edu/courses/bio141/lec
guide/unit3/viruses/lytlc.html