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Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis CompanyCopyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV
Infection
Chapter Twenty-Three
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Transmission of HIV occurs by one of three
major routes: (1) intimate sexual contact,
(2) contact with blood or other body fluids,
or (3) perinatally, from infected mother to
infant.
 HIV belongs to the genus Lentivirinae of the
virus family Retroviridae.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 HIV is classified as a retrovirus, because it
contains ribonucleic acid (RNA) as its nucleic
acid and a unique enzyme, reverse
transcriptase, that transcribes the viral RNA
into DNA.
 Figure 23-1 shows the structure of the HIV
virion.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The genome of HIV includes three main
structural genes— gag, env, and pol—and
a number of regulatory genes.
 Figure 23-2 shows the relative locations of the
major HIV genes and indicates their gene
products.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Other genes in the HIV genome code for
products that have regulatory or accessory
functions in controlling viral replication and
infectivity.
 Table 23-1 summarizes the major HIV-1
genes, their products, and their functions.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 HIV-2 has gag, env, pol, and
regulatory/accessory genes that have similar
functions to those seen in HIV-1.
 The homology between the genomes of the
two viruses is approximately 50 percent.
 HIV-1 and HIV-2 can most easily be
distinguished on the basis of antigenic
differences in their env proteins.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The first step in the reproductive cycle of
HIV is attachment of the virus to a susceptible
host cell.
 This interaction is mediated through the
host-cell CD4 antigen, which serves as a
receptor for the virus by binding the gp120
glycoprotein on the outer envelope of HIV.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 T helper cells are the main target for HIV
infection, because they express high
numbers of CD4 molecules on their cell
surface and bind the virus with high affinity.
 Other cells, such as macrophages,
monocytes, dendritic cells, Langerhans cells,
and microglial brain cells, can also be infected
with HIV, because they have some surface
CD4.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Entry of HIV into the host cells to which it
has attached requires an additional binding
step involving coreceptors that promote fusion
of the HIV envelope with the plasma cell
membrane.
 These coreceptors belong to a family of
chemokine receptors, whose main function is
to direct white blood cells to sites of
inflammation.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 After fusion occurs, the viral particle is taken
into the cell, and uncoating of the particle
exposes the viral genome.
 Action of the enzyme reverse transcriptase
produces complementary DNA from the
viral RNA.
 The viral DNA becomes integrated into the
host cell’s genome and is called a provirus
(see Fig. 23-3).
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Expression of the viral genes is induced
when the infected host cell is activated by
binding to antigen or by exposure to cytokines.
 A latent period may occur before expression of
the viral genes takes place.
 Viral DNA within the cell nucleus is then
transcribed into genomic RNA and
messenger RNA (mRNA), which are
transported to the cytoplasm.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Translation of mRNA occurs, with production
of viral proteins and assembly of viral
particles.
 The intact virions bud out from the host cell
membrane and acquire their envelope during
the process.
 These viruses can then proceed to infect
additional host cells.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Because viral replication occurs very rapidly,
and the reverse transcriptase enzyme lacks
proofreading activity, genetic mutations
commonly occur, producing distinct
isolates that exhibit antigenic variation.
 These isolates can vary in their susceptibility
to the host’s immune responses.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The initial viral replication can be detected in
the laboratory by the presence of increased
levels of p24 antigen and viral RNA in the
host’s bloodstream.
 As the virus replicates, some of the viral
proteins produced within host cells form
complexes with MHC class I antigens and
are transported to the cell surface, where they
stimulate lymphocyte responses.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 B lymphocytes are stimulated to produce
antibodies to HIV, which can usually be
detected 6 weeks after primary infection.
 The first antibodies to be detected are directed
against the gag proteins such as p24, followed
by production of antibodies to the envelope,
pol, and regulatory proteins.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 CD8+ cytotoxic T lymphocytes, also known
as cytolytic T cells (CTLs), appear within
weeks of HIV infection and are associated with
a decline in the amount of HIV in the blood
during acute infection.
 While antibodies can attach only to virions
circulating freely outside of host cells, CTLs
can attack host cells harboring viruses
internally.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 After the CTLs bind to HIV-infected host cells,
cytolytic enzymes are released from their
granules and destroy the target cells.
 CTL can also suppress replication and
spreading of HIV by producing cytokines like
interferon-γ, which have antiviral activity.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Although the humoral and cell-mediated
immune responses of the host usually reduce
the level of HIV replication, they are generally
not sufficient to completely eliminate the
virus.
 This is because HIV has developed several
mechanisms by which it can escape immune
responses.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 CTL and antibody responses to HIV are
hindered by the virus’s ability to undergo rapid
genetic mutations, generating escape
mutants with altered antigens toward which
the host’s initial immune responses are
ineffective.
 In addition, HIV can down-regulate the
production of MHC class I molecules on the
surface of the host cells it infects.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 HIV can also be harbored as a silent
provirus for long periods by numerous cells in
the body.
 In this proviral state, HIV is protected from
attack by the immune system until cell
activation stimulates the virus to multiply and
display its viral antigens.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 CD4+ T helper cells are most severely
affected, and a decrease in this cell
population is the hallmark feature of HIV.
 CD4+ T helper cells are killed or rendered
nonfunctional as a result of the HIV infection.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 These effects on CD4+ T helper cells occur
from a variety of mechanisms, including loss
of plasma membrane integrity due to viral
budding, destruction by HIV-specific CTL, and
viral induction of apoptosis.
 In addition to reducing T-cell numbers, HIV
also causes abnormalities in T helper cell
function and impairment of memory T helper
cell responses.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Although the manifestations of the disease
vary in individual patients, the infection
progresses through a clinical course that
begins with primary, or acute, infection,
followed by a period of clinical latency and
eventually culminating in AIDS.
 In the first stage, high levels of circulating
virus, or viremia, exist, and HIV begins to
disseminate to the lymphoid organs.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 As the immune system becomes activated, an
acute retroviral syndrome may develop,
with symptoms that resemble influenza or
infectious mononucleosis.
 As HIV-specific immune responses develop,
they begin to curtail replication of the virus,
and patients enter a period of clinical latency.
 The period of clinical latency may vary in
length, with a median length of 10 years.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 According to this definition, HIV-infected
individuals are classified as having AIDS if
they have an absolute CD4 T lymphocyte
count of less than 200/μL or certain
opportunistic infections or malignancies
indicative of AIDS (see Table 23-3).
 In addition to opportunistic infections and
malignancies, HIV-infected individuals often
demonstrate various neurological symptoms.

Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 According to this definition, adults,
adolescents, and children aged 18 months or
older are considered to be HIV-infected if they
meet the previously published clinical criteria
or if they demonstrate positive test results on
screening and confirmatory tests for HIV
antibody or on an HIV viral test (i.e., HIV
nucleic acid detection, HIV p24 antigen test, or
HIV isolation in culture).
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Treatment of HIV infection involves
supportive care of the infections and
malignancies and administration of
antiretroviral drugs to suppress the virus’s
replication.
 These drugs block various steps of the HIV
replication cycle.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The development of an effective HIV vaccine has
been very difficult for many reasons, including the
ability of HIV to rapidly mutate and escape
immune recognition, the capability of HIV to
persist despite vigorous immune responses of the
host, genetic variability in HIV clades, the need to
induce mucosal immunity, the need to induce
potent CTL and antibody responses, and the lack
of an ideal animal model.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The enumeration of CD4 T cells in the
peripheral blood has played a central role in
evaluating the degree of immune suppression
in HIV-infected patients for several years.
 In untreated patients, there is a progressive
decline in the number of CD4 T cells during
the course of infection (see Fig. 23-4).
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The CDC criteria utilize CD4 T-cell counts
to classify patients into various stages of
HIV infection, with those whose counts are
below 200/μL classified as having AIDS.
 In addition, CD4 T-cell counts are used
routinely to monitor the effectiveness of
antiretroviral therapy.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 It is recommended that CD4 T-cell
measurements be performed every 3–6
months in HIV-infected patients to guide
physicians in determining when antiviral
therapy should be initiated, whether a change
in therapy is necessary, and if prophylactic
drugs for certain opportunistic infections
should be administered.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 According to published guidelines,
antiretroviral therapy should be initiated in
patients whose CD4 T-cell count is less than
350/μL; therapy should be changed if CD4 T-
cell counts decline more than 25 percent.
 The gold standard for enumerating CD4 T
cells is immunophenotyping with data
analysis by flow cytometry.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
Absolute numbers of CD4 T cells are
calculated according to the following equation
 Absolute # CD4 T cells = WBC count x %
Lymphocytes x % CD4 T cells
 The absolute CD4 T-cell count is then
compared to the reference range, which is
typically from 500 to 1300 cells/μL peripheral
blood.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The standard screening method for HIV
antibody has been the ELISA, and the
standard confirmatory test is the Western
blot.
 Succeeding generations of ELISA tests exhibit
increasing sensitivity and specificity, the ability
to detect antibodies to both HIV-1 and HIV-2,
and to detect the p24 antigen.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 While ELISAs have a high level of
sensitivity and specificity, they may
sometimes give erroneous results.
 False-positive and false-negative results may
be obtained for a variety of reasons.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 False-negative results may be due to
collection of the sample prior to
seroconversion, to administration of
immunosuppressive therapy or replacement
transfusion, to conditions of defective antibody
synthesis such as hypogammaglobulinemia, or
to technical errors attributed to improper
handling of kit reagents.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 False-positive results may occur because of
several factors, including heat inactivation of
serum prior to testing, repeated
freezing/thawing of specimens, presence of
autoreactive antibodies, history of multiple
pregnancies, severe hepatic disease, passive
immunoglobulin administration, recent
exposure to certain vaccines, and certain
malignancies.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 In low-risk populations, ELISA tests have a
low positive predictive value, or probability
that the patient truly has the disease if the test
result is positive.
 According to a commonly accepted testing
algorithm established by the CDC, when a
sample screened for HIV antibody by ELISA
yields a positive result, it should be retested in
duplicate by the same ELISA test.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 If two out of the three specimens are
reactive by ELISA, then the results must be
confirmed by a more specific method,
usually Western blot.
 Repeatedly reactive units of blood are not
used for transfusion, regardless of results of
confirmatory testing.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Rapid screening tests are ideal for use in
resource-limited settings in developing
nations and in situations in which fast
notification of test results is desired.
 For example, rapid results are important in
guiding decisions to begin prophylactic therapy
with antiretroviral drugs following occupational
exposures.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Other situations in which rapid tests are
very beneficial include testing women whose
HIV status is unknown during labor and
delivery and testing patients in sexually
transmitted disease clinics or emergency
departments who are unlikely to make a return
visit for their test results.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 While each test has unique features, all are
lateral flow or flow-through immunoassays that
produce a colorimetric reaction in the case of
a positive result.
 A reactive result is reported as a
preliminary positive and, like the standard
ELISA, requires confirmation by a more
specific test like the Western blot because of
the possibility of false-positive results
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Western blot kits are prepared commercially
as nitrocellulose or nylon strips containing
individual HIV proteins that have been
separated by polyacrylamide gel
electrophoresis and blotted onto the test
membrane.
 The testing laboratory then reacts the test strip
with patient serum.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 During the incubation period, any HIV
antibodies present will bind to their
corresponding antigen on the test membrane,
and unbound antibody is removed by washing.
 Next, an antihuman immunoglobulin with an
enzyme label (i.e., the conjugate) is added
directly to the test strip and binds to specific
HIV antibodies from the patient sample.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Unbound conjugate is removed by washing,
and bound conjugate is detected after adding
the appropriate substrate, which produces a
chromogenic reaction.
 Colored bands appear in the positions where
antigen-specific HIV antibodies are present.
 Separate HIV-1- and HIV-2-specific Western
blot tests must be used to test for antibodies to
each virus.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 A negative test result is reported if either no
bands are present or if none of the bands
present correspond to the molecular weights
of any of the known viral proteins.
 According to these criteria, a result should
be reported as positive if at least two of the
following three bands are present: p24,
gp41, and gp120/gp160 (see Fig. 23-5).
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
Figure 23-5
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Specimens that have some of the
characteristic bands present but do not meet
the criteria for a positive test result are
considered to be indeterminate.
 This result may occur if the test serum is
collected in the early phase of seroconversion
or if the serum contains antibodies that cross-
react with some of the immunoblot antigens,
producing false-positive results.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 False positives may be caused by
antibodies produced to contaminants from the
cells used to culture HIV to prepare the
antigens for the test; to autoantibodies,
including those directed against HLA, nuclear,
mitochondrial, or T-cell antigens; or to
antibodies produced after vaccinations.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 If the pattern converts to positive at a later
time, it can be concluded that the first
specimen was obtained during the early phase
of seroconversion.
 Failure of an indeterminate test pattern to
convert to positive after a few weeks
strongly suggests that the pattern is due to a
false-positive test rather than HIV infection.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The p24 antigen is detected by a solid-
phase antigen capture enzyme
immunoassay.
 All positive results should be confirmed by a
neutralization assay.
 This is accomplished by preincubating the
patient specimen with human anti-HIV-1
antibody prior to performing the p24 antigen
assay.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 If p24 antigen is present, the neutralizing
antibody will form immune complexes and will
prevent the antigen from binding to the HIV
antibody on the solid support.
 In a positive test, absorbance should
decreased by at least 50 percent.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Because p24 antigen becomes undetectable
as the host produces antibody and binds the
antigen in immune complexes, the p24 antigen
test cannot replace the ELISA test for HIV
antibody as the primary screening test for HIV-
1 infection.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Quantitative tests for HIV nucleic acid, also
known as viral load tests, are used routinely
to help predict disease progression, predict
response to antiretroviral therapy, and monitor
effects of the therapy.
 Viral load testing is performed by nucleic acid
amplification methods.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The optimal goal of therapy is to reach
undetectable levels of HIV RNA (i.e., 50–80
copies/mL, depending on the assay).
 Patients who fail to achieve a significant decrease
in viral load after receiving antiretroviral drugs
may not be adhering to the appropriate drug
administration schedule or may have problems
absorbing the drugs or may have developed viral
resistance to the drugs..
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 The U.S. Department of Health and Human
Services recommends that plasma HIV RNA
testing be performed before antiretroviral
therapy begins, to obtain a baseline value.
 Testing should then be done 2–8 weeks after
the initiation of therapy and every 3–4 months
thereafter to determine the effectiveness of the
therapy.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 A change in viral load is considered to be
significant if there is at least a threefold or 0.5
log increase or decrease in the number of
copies/mL.
 Initiation of antiretroviral therapy or a change
in the therapy protocol is recommended for
patients whose HIV RNA levels and CD4 T-cell
counts reach critical values (200–350
cells/mm3).
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Two types of laboratory methods can be
used to test for drug resistance: genotype
resistance assays and phenotype resistance
assays.
 Genotype resistance assays detect
mutations in the reverse transcriptase and
protease genes of HIV.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 In these tests, RNA is isolated from patient
plasma, the desired genes are amplified by
RT-PCR, and the products are analyzed for
mutations associated with drug resistance by
automated DNA sequencing or hybridization.
 Phenotype resistance assays determine the
ability of clinical isolates of HIV to grow in the
presence of antiretroviral drugs.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 These assays are technically complex and are
performed only by highly specialized reference
laboratories.
 The major advantage of phenotypic assays is
that they measure drug susceptibility directly,
on the basis of all mutations present in the
patient’s isolate.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 serological tests are not reliable in detecting
HIV infection in children younger than 18
months of age because of placental passage
of IgG antibodies from an infected mother to
her child.
 A child born to an HIV-positive mother may
test positive for HIV antibody during the first
18 months of life even though the child is not
infected.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Because of the difficulties with serological
testing, HIV infection in infants is best
diagnosed using molecular methods.
 A qualitative HIV-1 DNA PCR test is the
preferred method for this purpose.
 Alternatively, quantitative HIV RNA assays
may be used to diagnose HIV infection in
infants and young children.
Clinical Immunology & Serology
A Laboratory Perspective, Third Edition
Copyright © 2010 F.A. Davis Company
Laboratory Diagnosis of HIV Infection
 Testing for p24 antigen is not recommended,
as it has a low sensitivity in infants.
 Increased emphasis on screening pregnant
women for HIV infection should also help
in the identification of HIV-positive infants.
 Infected infants have a better prognosis when
HAART is started early and can benefit from
treatment with prophylactic drugs for
opportunistic infections.

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Ch23 (4)

  • 1. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis CompanyCopyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection Chapter Twenty-Three
  • 2. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Transmission of HIV occurs by one of three major routes: (1) intimate sexual contact, (2) contact with blood or other body fluids, or (3) perinatally, from infected mother to infant.  HIV belongs to the genus Lentivirinae of the virus family Retroviridae.
  • 3. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  HIV is classified as a retrovirus, because it contains ribonucleic acid (RNA) as its nucleic acid and a unique enzyme, reverse transcriptase, that transcribes the viral RNA into DNA.  Figure 23-1 shows the structure of the HIV virion.
  • 4. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The genome of HIV includes three main structural genes— gag, env, and pol—and a number of regulatory genes.  Figure 23-2 shows the relative locations of the major HIV genes and indicates their gene products.
  • 5. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Other genes in the HIV genome code for products that have regulatory or accessory functions in controlling viral replication and infectivity.  Table 23-1 summarizes the major HIV-1 genes, their products, and their functions.
  • 6. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  HIV-2 has gag, env, pol, and regulatory/accessory genes that have similar functions to those seen in HIV-1.  The homology between the genomes of the two viruses is approximately 50 percent.  HIV-1 and HIV-2 can most easily be distinguished on the basis of antigenic differences in their env proteins.
  • 7. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The first step in the reproductive cycle of HIV is attachment of the virus to a susceptible host cell.  This interaction is mediated through the host-cell CD4 antigen, which serves as a receptor for the virus by binding the gp120 glycoprotein on the outer envelope of HIV.
  • 8. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  T helper cells are the main target for HIV infection, because they express high numbers of CD4 molecules on their cell surface and bind the virus with high affinity.  Other cells, such as macrophages, monocytes, dendritic cells, Langerhans cells, and microglial brain cells, can also be infected with HIV, because they have some surface CD4.
  • 9. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Entry of HIV into the host cells to which it has attached requires an additional binding step involving coreceptors that promote fusion of the HIV envelope with the plasma cell membrane.  These coreceptors belong to a family of chemokine receptors, whose main function is to direct white blood cells to sites of inflammation.
  • 10. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  After fusion occurs, the viral particle is taken into the cell, and uncoating of the particle exposes the viral genome.  Action of the enzyme reverse transcriptase produces complementary DNA from the viral RNA.  The viral DNA becomes integrated into the host cell’s genome and is called a provirus (see Fig. 23-3).
  • 11. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Expression of the viral genes is induced when the infected host cell is activated by binding to antigen or by exposure to cytokines.  A latent period may occur before expression of the viral genes takes place.  Viral DNA within the cell nucleus is then transcribed into genomic RNA and messenger RNA (mRNA), which are transported to the cytoplasm.
  • 12. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Translation of mRNA occurs, with production of viral proteins and assembly of viral particles.  The intact virions bud out from the host cell membrane and acquire their envelope during the process.  These viruses can then proceed to infect additional host cells.
  • 13. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Because viral replication occurs very rapidly, and the reverse transcriptase enzyme lacks proofreading activity, genetic mutations commonly occur, producing distinct isolates that exhibit antigenic variation.  These isolates can vary in their susceptibility to the host’s immune responses.
  • 14. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The initial viral replication can be detected in the laboratory by the presence of increased levels of p24 antigen and viral RNA in the host’s bloodstream.  As the virus replicates, some of the viral proteins produced within host cells form complexes with MHC class I antigens and are transported to the cell surface, where they stimulate lymphocyte responses.
  • 15. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  B lymphocytes are stimulated to produce antibodies to HIV, which can usually be detected 6 weeks after primary infection.  The first antibodies to be detected are directed against the gag proteins such as p24, followed by production of antibodies to the envelope, pol, and regulatory proteins.
  • 16. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  CD8+ cytotoxic T lymphocytes, also known as cytolytic T cells (CTLs), appear within weeks of HIV infection and are associated with a decline in the amount of HIV in the blood during acute infection.  While antibodies can attach only to virions circulating freely outside of host cells, CTLs can attack host cells harboring viruses internally.
  • 17. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  After the CTLs bind to HIV-infected host cells, cytolytic enzymes are released from their granules and destroy the target cells.  CTL can also suppress replication and spreading of HIV by producing cytokines like interferon-γ, which have antiviral activity.
  • 18. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Although the humoral and cell-mediated immune responses of the host usually reduce the level of HIV replication, they are generally not sufficient to completely eliminate the virus.  This is because HIV has developed several mechanisms by which it can escape immune responses.
  • 19. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  CTL and antibody responses to HIV are hindered by the virus’s ability to undergo rapid genetic mutations, generating escape mutants with altered antigens toward which the host’s initial immune responses are ineffective.  In addition, HIV can down-regulate the production of MHC class I molecules on the surface of the host cells it infects.
  • 20. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  HIV can also be harbored as a silent provirus for long periods by numerous cells in the body.  In this proviral state, HIV is protected from attack by the immune system until cell activation stimulates the virus to multiply and display its viral antigens.
  • 21. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  CD4+ T helper cells are most severely affected, and a decrease in this cell population is the hallmark feature of HIV.  CD4+ T helper cells are killed or rendered nonfunctional as a result of the HIV infection.
  • 22. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  These effects on CD4+ T helper cells occur from a variety of mechanisms, including loss of plasma membrane integrity due to viral budding, destruction by HIV-specific CTL, and viral induction of apoptosis.  In addition to reducing T-cell numbers, HIV also causes abnormalities in T helper cell function and impairment of memory T helper cell responses.
  • 23. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Although the manifestations of the disease vary in individual patients, the infection progresses through a clinical course that begins with primary, or acute, infection, followed by a period of clinical latency and eventually culminating in AIDS.  In the first stage, high levels of circulating virus, or viremia, exist, and HIV begins to disseminate to the lymphoid organs.
  • 24. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  As the immune system becomes activated, an acute retroviral syndrome may develop, with symptoms that resemble influenza or infectious mononucleosis.  As HIV-specific immune responses develop, they begin to curtail replication of the virus, and patients enter a period of clinical latency.  The period of clinical latency may vary in length, with a median length of 10 years.
  • 25. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  According to this definition, HIV-infected individuals are classified as having AIDS if they have an absolute CD4 T lymphocyte count of less than 200/μL or certain opportunistic infections or malignancies indicative of AIDS (see Table 23-3).  In addition to opportunistic infections and malignancies, HIV-infected individuals often demonstrate various neurological symptoms. 
  • 26. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  According to this definition, adults, adolescents, and children aged 18 months or older are considered to be HIV-infected if they meet the previously published clinical criteria or if they demonstrate positive test results on screening and confirmatory tests for HIV antibody or on an HIV viral test (i.e., HIV nucleic acid detection, HIV p24 antigen test, or HIV isolation in culture).
  • 27. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Treatment of HIV infection involves supportive care of the infections and malignancies and administration of antiretroviral drugs to suppress the virus’s replication.  These drugs block various steps of the HIV replication cycle.
  • 28. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The development of an effective HIV vaccine has been very difficult for many reasons, including the ability of HIV to rapidly mutate and escape immune recognition, the capability of HIV to persist despite vigorous immune responses of the host, genetic variability in HIV clades, the need to induce mucosal immunity, the need to induce potent CTL and antibody responses, and the lack of an ideal animal model.
  • 29. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The enumeration of CD4 T cells in the peripheral blood has played a central role in evaluating the degree of immune suppression in HIV-infected patients for several years.  In untreated patients, there is a progressive decline in the number of CD4 T cells during the course of infection (see Fig. 23-4).
  • 30. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The CDC criteria utilize CD4 T-cell counts to classify patients into various stages of HIV infection, with those whose counts are below 200/μL classified as having AIDS.  In addition, CD4 T-cell counts are used routinely to monitor the effectiveness of antiretroviral therapy.
  • 31. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  It is recommended that CD4 T-cell measurements be performed every 3–6 months in HIV-infected patients to guide physicians in determining when antiviral therapy should be initiated, whether a change in therapy is necessary, and if prophylactic drugs for certain opportunistic infections should be administered.
  • 32. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  According to published guidelines, antiretroviral therapy should be initiated in patients whose CD4 T-cell count is less than 350/μL; therapy should be changed if CD4 T- cell counts decline more than 25 percent.  The gold standard for enumerating CD4 T cells is immunophenotyping with data analysis by flow cytometry.
  • 33. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection Absolute numbers of CD4 T cells are calculated according to the following equation  Absolute # CD4 T cells = WBC count x % Lymphocytes x % CD4 T cells  The absolute CD4 T-cell count is then compared to the reference range, which is typically from 500 to 1300 cells/μL peripheral blood.
  • 34. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The standard screening method for HIV antibody has been the ELISA, and the standard confirmatory test is the Western blot.  Succeeding generations of ELISA tests exhibit increasing sensitivity and specificity, the ability to detect antibodies to both HIV-1 and HIV-2, and to detect the p24 antigen.
  • 35. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  While ELISAs have a high level of sensitivity and specificity, they may sometimes give erroneous results.  False-positive and false-negative results may be obtained for a variety of reasons.
  • 36. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  False-negative results may be due to collection of the sample prior to seroconversion, to administration of immunosuppressive therapy or replacement transfusion, to conditions of defective antibody synthesis such as hypogammaglobulinemia, or to technical errors attributed to improper handling of kit reagents.
  • 37. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  False-positive results may occur because of several factors, including heat inactivation of serum prior to testing, repeated freezing/thawing of specimens, presence of autoreactive antibodies, history of multiple pregnancies, severe hepatic disease, passive immunoglobulin administration, recent exposure to certain vaccines, and certain malignancies.
  • 38. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  In low-risk populations, ELISA tests have a low positive predictive value, or probability that the patient truly has the disease if the test result is positive.  According to a commonly accepted testing algorithm established by the CDC, when a sample screened for HIV antibody by ELISA yields a positive result, it should be retested in duplicate by the same ELISA test.
  • 39. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  If two out of the three specimens are reactive by ELISA, then the results must be confirmed by a more specific method, usually Western blot.  Repeatedly reactive units of blood are not used for transfusion, regardless of results of confirmatory testing.
  • 40. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Rapid screening tests are ideal for use in resource-limited settings in developing nations and in situations in which fast notification of test results is desired.  For example, rapid results are important in guiding decisions to begin prophylactic therapy with antiretroviral drugs following occupational exposures.
  • 41. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Other situations in which rapid tests are very beneficial include testing women whose HIV status is unknown during labor and delivery and testing patients in sexually transmitted disease clinics or emergency departments who are unlikely to make a return visit for their test results.
  • 42. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  While each test has unique features, all are lateral flow or flow-through immunoassays that produce a colorimetric reaction in the case of a positive result.  A reactive result is reported as a preliminary positive and, like the standard ELISA, requires confirmation by a more specific test like the Western blot because of the possibility of false-positive results
  • 43. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Western blot kits are prepared commercially as nitrocellulose or nylon strips containing individual HIV proteins that have been separated by polyacrylamide gel electrophoresis and blotted onto the test membrane.  The testing laboratory then reacts the test strip with patient serum.
  • 44. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  During the incubation period, any HIV antibodies present will bind to their corresponding antigen on the test membrane, and unbound antibody is removed by washing.  Next, an antihuman immunoglobulin with an enzyme label (i.e., the conjugate) is added directly to the test strip and binds to specific HIV antibodies from the patient sample.
  • 45. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Unbound conjugate is removed by washing, and bound conjugate is detected after adding the appropriate substrate, which produces a chromogenic reaction.  Colored bands appear in the positions where antigen-specific HIV antibodies are present.  Separate HIV-1- and HIV-2-specific Western blot tests must be used to test for antibodies to each virus.
  • 46. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  A negative test result is reported if either no bands are present or if none of the bands present correspond to the molecular weights of any of the known viral proteins.  According to these criteria, a result should be reported as positive if at least two of the following three bands are present: p24, gp41, and gp120/gp160 (see Fig. 23-5).
  • 47. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection Figure 23-5
  • 48. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Specimens that have some of the characteristic bands present but do not meet the criteria for a positive test result are considered to be indeterminate.  This result may occur if the test serum is collected in the early phase of seroconversion or if the serum contains antibodies that cross- react with some of the immunoblot antigens, producing false-positive results.
  • 49. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  False positives may be caused by antibodies produced to contaminants from the cells used to culture HIV to prepare the antigens for the test; to autoantibodies, including those directed against HLA, nuclear, mitochondrial, or T-cell antigens; or to antibodies produced after vaccinations.
  • 50. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  If the pattern converts to positive at a later time, it can be concluded that the first specimen was obtained during the early phase of seroconversion.  Failure of an indeterminate test pattern to convert to positive after a few weeks strongly suggests that the pattern is due to a false-positive test rather than HIV infection.
  • 51. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The p24 antigen is detected by a solid- phase antigen capture enzyme immunoassay.  All positive results should be confirmed by a neutralization assay.  This is accomplished by preincubating the patient specimen with human anti-HIV-1 antibody prior to performing the p24 antigen assay.
  • 52. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  If p24 antigen is present, the neutralizing antibody will form immune complexes and will prevent the antigen from binding to the HIV antibody on the solid support.  In a positive test, absorbance should decreased by at least 50 percent.
  • 53. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Because p24 antigen becomes undetectable as the host produces antibody and binds the antigen in immune complexes, the p24 antigen test cannot replace the ELISA test for HIV antibody as the primary screening test for HIV- 1 infection.
  • 54. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Quantitative tests for HIV nucleic acid, also known as viral load tests, are used routinely to help predict disease progression, predict response to antiretroviral therapy, and monitor effects of the therapy.  Viral load testing is performed by nucleic acid amplification methods.
  • 55. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The optimal goal of therapy is to reach undetectable levels of HIV RNA (i.e., 50–80 copies/mL, depending on the assay).  Patients who fail to achieve a significant decrease in viral load after receiving antiretroviral drugs may not be adhering to the appropriate drug administration schedule or may have problems absorbing the drugs or may have developed viral resistance to the drugs..
  • 56. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  The U.S. Department of Health and Human Services recommends that plasma HIV RNA testing be performed before antiretroviral therapy begins, to obtain a baseline value.  Testing should then be done 2–8 weeks after the initiation of therapy and every 3–4 months thereafter to determine the effectiveness of the therapy.
  • 57. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  A change in viral load is considered to be significant if there is at least a threefold or 0.5 log increase or decrease in the number of copies/mL.  Initiation of antiretroviral therapy or a change in the therapy protocol is recommended for patients whose HIV RNA levels and CD4 T-cell counts reach critical values (200–350 cells/mm3).
  • 58. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Two types of laboratory methods can be used to test for drug resistance: genotype resistance assays and phenotype resistance assays.  Genotype resistance assays detect mutations in the reverse transcriptase and protease genes of HIV.
  • 59. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  In these tests, RNA is isolated from patient plasma, the desired genes are amplified by RT-PCR, and the products are analyzed for mutations associated with drug resistance by automated DNA sequencing or hybridization.  Phenotype resistance assays determine the ability of clinical isolates of HIV to grow in the presence of antiretroviral drugs.
  • 60. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  These assays are technically complex and are performed only by highly specialized reference laboratories.  The major advantage of phenotypic assays is that they measure drug susceptibility directly, on the basis of all mutations present in the patient’s isolate.
  • 61. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  serological tests are not reliable in detecting HIV infection in children younger than 18 months of age because of placental passage of IgG antibodies from an infected mother to her child.  A child born to an HIV-positive mother may test positive for HIV antibody during the first 18 months of life even though the child is not infected.
  • 62. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Because of the difficulties with serological testing, HIV infection in infants is best diagnosed using molecular methods.  A qualitative HIV-1 DNA PCR test is the preferred method for this purpose.  Alternatively, quantitative HIV RNA assays may be used to diagnose HIV infection in infants and young children.
  • 63. Clinical Immunology & Serology A Laboratory Perspective, Third Edition Copyright © 2010 F.A. Davis Company Laboratory Diagnosis of HIV Infection  Testing for p24 antigen is not recommended, as it has a low sensitivity in infants.  Increased emphasis on screening pregnant women for HIV infection should also help in the identification of HIV-positive infants.  Infected infants have a better prognosis when HAART is started early and can benefit from treatment with prophylactic drugs for opportunistic infections.