2. CONTENTS
Advances in overcoming problems
o Hyperhydricity
o Contamination
o Phenolic exudates
o Habituation
Hardening
Packing & Transportation
Quarantine for tissue culture raised plants
Quality control
3. Hyperhydricity
Hyperhydricity (vitrification) is a physiological malformation that results in excessive
hydration, low lignification, impaired stomatal function and reduced mechanical
strength of tissue culture-generated plants.
Hyperhydric plantlets remain stunted,
and show a typical ‘glassy’ appearance
Thick, translucent, curled, and brittle
leaves
These plantlets survive very poorly
4. Effects (Considerable losses in:)
Commercial micropropagation industry
Conservation of plant resources and genetic transformation of
plants
5. CAUSES
High salt concentration and High relative humidity
Low light intensity
Ethylene, a stress-related plant hormone accumulation
Concentration and type of gelling agent
High ammonium concentration
The conc. of microelement and hormonal imbalances
6. Control
• By modifying the atmosphere of the culture vessels
Adjusting the relative humidity in the vessel
Use of gas-permeable membranes (increased exchange of water vapor and
other gases such as ethylene)
Using higher concentration of a gelling agent, higher-strength gelling agent
HH can also be controlled by bottom cooling, which allows water to condense
on the medium
• Decreasing the ratio of NH4
+:NO3
- in the medium
• It was also shown that an increase in calcium in the medium reduced
hyperhydricity
• Silver ion (Ag+) inhibits the activity of ethylene
For more details, Read: https://sci-hub.tw/10.1016/b978-0-12-802221-4.00013-3
7. About 67% of the hyperhydric plantlets
were found to revert to normal condition
when the plantlets were cultured in
medium supplemented with 29.4 mol/L
AgNO3
Water content and hydrogen peroxide
(H2O2) content in the guard cells of these
plantlets were reduced
AgNO3 also reduced the content of
endogenous ethylene
Provided clues for exploring the cause of
excessive water accumulation in
hyperhydric plants
9. PPMTM - Plant Preservative Mixture
• Plant culture preservative and broad-spectrum biocide
• Penetrate the fungus or the bacterium cell wall and inhibit the activity of key
enzymes in the metabolic cycles such as the citric acid cycle and the electron
transport chain
• Also inhibit the transport of monosaccharides and amino acids from the medium
into the fungus or bacterium cells
• PPM™ is less expensive than antibiotics, making it affordable for wide and routine
use.
• Since PPM™ targets and inhibits multiple enzymes, the formation of resistant
mutants towards PPM™is unlikely.
• PPM™ is heat stable and in general can be autoclaved with media.
ADVANTAGES OVER ANTIBIOTICS
10. Application of CuSO4 at 5 and 10 μM is helpful in controlling endogenous contamination and
promoting growth in E. variegata in vitro cultures
Higher concentrations were toxic and caused decrease in chlorophyll content along with
overall growth of the cultures.
Optimized the concentration of the metal in the growth media to tackle endogenous
infection while also increasing the growth of the cultures, unlike the antibiotics, which
inhibits plant’s growth.
Use of Cu for suppression of
microbial contamination
12. Phenolic Exudation
The exudates are phenolic compounds that oxidize to form a brown material in the
medium that tends to be inhibitory to development.
Various treatments to minimize this
problem
Treating the explant with an
antioxidant (citric or ascorbic acid)
Including an adsorbent material in the
medium (polyvinylpyrrolidone or
activated charcoal)
Frequent transfers to a new
medium
13. • Genotype
• Explant age
• Light intensity
• Sterilization
• Put cultures to the dark in a fridge at about 5°C
• In cotton tissue culture, to reduce 'browning' caused by phenolic compounds,
glucose (instead of sucrose) as carbon source, and use 'Phytagel™' as gelling
agent (instead of agar)
Other factors
14. Tocopherols (or TCP) are a class of chemical compounds of which many have vitamin
E activity. Alpha-Tocopherol is the form of vitamin E
15. • In addition, cold pretreatment at 4°C for three or five days with or without
soaking in antioxidants were investigated
• Results:
1. Soaking of shoot tips in vitamin E before in vitro culture reduced browning
2. Keeping the explants for 3 days at 5°C decreased browning percentage
3. Vitamin E as well as cold pre-treatments enhanced callus induction
significantly
16. Pre-treatment with V.E at 40% is recommended to achieve the lowest browning and the
highest callus induction results in date palm cultures
Cold pre-treatment for three days at 5°C is recommended when the using of antioxidant is
not preferred
18. Various levels of 2-aminoindane-2-phosphonic acid
(AIP)
Visual browning scores (1-10)
Cultured on 4.5 μM 2,4-D based media
2- aminoindane-2-phosphonic acid (AIP)
Competitive PAL inhibitor
19. Browning can also be reduced by:
• Choice of juvenile explants
• Culture in darkness
• Transfer to fresh medium at short intervals
• Culture in liquid medium
• Soaking explants in solutions containing antioxidants prior to
inoculation
• Choice of a low salt medium and proper GR
20. Habituation
Habituation is when a culture continues to develop in the absence of auxin or
cytokinin
Stable heritable loss in requirement of
growth factors by tissue culture plants
Shoot cultures habituated for
cytokinin continue to produce new
shoots on a cytokinin-free medium
21. • Proliferation of undifferentiated callus tissue and the formation of shoot structures
are all cytokinin-dependent processes.
• Habituation refers to a naturally occurring phenomenon whereby callus cultures,
upon continued passage, lose their requirement for cytokinin.
• Increased levels of expression of the cytokinin receptor CRE1 and altered levels of
other genes involved in cytokinin signaling
• Up-regulation of the transcription factor, transposon-related elements, and several
DNA- and chromatin-modifying enzymes which indicated that epigenetic changes
contribute to the acquisition of cytokinin habituation
Transcriptome-based analysis:
Introduction
22. Hardening
Transferring the
plantlets from in vitro
to ex-vitro; is a
crucial step in tissue
culture
Minimum survival
rates when cultured
plants re-established
Expose plants to
natural
conditions in step
wise manner
↓
High Humidity:
Fog
Mist
Clear cups
Hardening :
Controlled
Temp, light &
humidity
23. Gradual Adaptation to ex-vitro
• Usually the common method to acclimatized in vitro propagated plantlets
using weaning chamber (scheduled misting system)
• Several researchers have reported the use of:
different potting media
Bio-inoculants
Propagation structures for proper hardening and successful
establishment in the open conditions
24. • The right potting media determines the success in acclimatization of
tissue cultured plantlets
• The most commonly used components:
Peat
Soil
vermiculite
organic composts and residues of the agroindustry like rice hulls,
Pinus and Acacia mearnsii bark
25. In the present study cocopeat showed
to be far superior to other potting media
95% survival
Better aeration, water holding
and nutrient supplying capacity of
cocopeat as compared to
vermicompost, sand and vermiculite
26. • Flats: shallow plastic, Styrofoam, wooden, or metal trays, with drainage holes
in the bottom
• Plastic Pots : nonporous, reusable, lightweight, and use little storage space
because they will nest
• Fiber Pots: pots are biodegradable, they are set in the soil along with the
plants
• Paper Pots : pots are biodegradable, and the seedling plug can be planted
intact into a larger container or into the ground without disturbing the root
system
CONTAINERS FOR PROPAGATING AND GROWING YOUNG
LINER PLANTS
28. Packing & Transportation
All the hardened plants in poly bags are either dispatched in ventilated plastic
crates or cardboard cartons
The plants are removed from poly bags, washed free from soil, wrapped in tissue
paper, and packed in ventilated cardboard cartons
Each package is affixed with a certification label Duly signed; labels are provided by
the Accredited Test Laboratory (ATL) to the Tissue Culture Production Facility
29. Record of the deployment of the labels in terms of the size of packages,
number of plants per package, the name and contact details of the
consignee etc
A small handout or printed leaf let is placed on each package giving
relevant information about after-care of tissue culture plants
The packages carry appropriate instruction such as “HANDLE WITH CARE-
TISSUE CULTURE PLANTS”
. . .
For more details, visit: http://dbtncstcp.nic.in/Portals/0/Images/SOP-TCPF.pdf
30. LIST OF INSPECTION AUTHORITY
S.No. Name of Inspection Authority Jurisdiction Purpose
1 Head, Advance Centre for Plant
Virology, Indian Agricultural Research
Institute, PUSA, New Delhi
Entire Country Tissue culture raised
plants
2 Head, Indian Institute of Horticulture
Research, Hesarrgatta, Bangalore
Entire Country Tissue culture raised
plants
3
Head, Bio-resources Technology,
Palampur, Himachal Pradesh Entire Country
Tissue culture raised
plants
Plant Quarantine India
http://agritech.tnau.ac.in/crop_protection/crop_prot_quarantine_list%20of%20inspection%20authorities.html
31. Main features
No consignment of seeds/planting materials are imported into India
without a valid ‘Import Permit’
No consignment of seeds/planting materials are imported into India
unless accompained by a 'Phytosanitary Certificate'
All consignments imported into India through station, seaport, airport and
other entry points; are inspected and if necessary, fumigated, disinfected
by authorised plant quarantine officials
32. Materials requiring isolation are grown in post-entry quarantine facility
certified by the Designated Inspection Authority (DIA) to the conditions
laid down by the Plant Protection Adviser to the Govt. of India
Hay, straw or any other materials of plant origin shall not be used as
packing material
Import of soil, earth, sand, compost, and plant debris accompanying
seeds/planting materials is not permitted.
For more details, visit: http://www.nbpgr.ernet.in/Divisions_and_Units/Plant_Quarantine.aspx
33. 1. The tissue culture facility shall have small growth chamber or separate
incubation place for holding imported tissue.
2. The facility shall have an isolated poly/screen house facility for tissue culture
hardening.
3. The facility shall have Enzyme Linked Immuno-Sorbent Assay (ELISA) facility for
virus screening of stock material.
Requirements of tissue culture quarantine facility
http://plantquarantineindia.nic.in/pqispub/html/PostQReq.htm
34. a) Double door entry
b) The vents/openings shall be screened with insect-proof mesh of stainless
steel/phosphor bronze, meshes and woven wire. If nylon mesh is used it should be
of good quality and evenly woven
c) The drainage must be through a gully trap with a provision for insect-proofing in
case of concrete flooring
d) The entrance shall be provided with disinfectant pad for sterilization of feet and
basin for disinfecting hands
e) Suitable yellow sticky traps shall be hanged at various intervals at crop canopy level
to monitor insect population.
Some of the Requirements of closed quarantine facility
(glass/screen/poly house)
35. Quality control for tissue culture raised
plants
1. Virus indexing
Virus indexing is the testing of plants for the presence or absence of viruses. Each
meristem tip or callus or callus-derived plantlets are tested before using it as
mother plant to produce virus-free stock
36. Genetic stability is of a major importance in micropropagation of any crop
species
The assessment of the genetic stability of in vitro derived clones is an
essential step for micropropagation of true to type clones
If the analysis is carried out in the initial stages, one may suitably
modify the micropropagation protocols to avoid the variation
2. Genetic stability
Causes of Variation:
Genotype of parent
Change in chromosome number
Change in chromosome structure
Point mutation
37. Approaches
To maintain the genetic constitution of a particular clone through its life span :
Morphological observation
Cytological analysis
Molecular markers
Editor's Notes
Silver ion (Ag+) inhibits the activity of ethylene by binding to ethylene receptors involved in ethylene signaling, and there by hindering ethylene signal transduction (Bernard et al 2015)
Van den Dries found that the expression of acyl-CoA oxidase (ACO), a gene that encodes an enzyme involved in ethylene biosynthesis, is elevated in hyperhydric seedlings
Introduction
PPM™ (Plant Preservative Mixture) is a heat stable preservative/biocide that, based on the dose, effectively prevents or reduces microbial contamination in plant tissue culture.
At optimum doses, PPM™, does not impair in vitro seed germination, callus proliferation or callus regeneration.
Despite the most stringent use of sterile techniques and aseptic conditions, the contamination of plant cell and plant tissue cultures remain a persistent problem.
PPM™ prevents the germination of both bacteria and fungi spores. Because it's heat stable, it can be autoclaved with media.
PPM™ can be used as a standard ingredient in plant tissue culture media. PPM is less expensive than antibiotics and can prevent fungal contamination simultaneously.
PPM is both biostatic and biocidal. In addition to inhibiting airborne, waterborne and human contact contamination, it also can be used to reduce endogenous contamination.
The principal PCT scientist involved in the development of the PPM™ application is Dr. Assaf Guri. Dr. Assaf Guri holds degrees in genetics, applied genetics and plant breeding from the Hebrew University in Jerusalem and Michigan State University in the US. Before joining Plant Cell Technology, Inc., Assaf worked with the Volcani Agricultural Research Center in Israel, Michigan State University in East Lansing, Michigan and DNAP in New Jersey.
Mechanism Of Action
PPM™ (Plant Preservative Mixture) is a broad-spectrum preservative and biocide, which kills bacteria and fungi cells, prevents germination of spores, and in higher concentrations, can eliminate endogenous contamination in explants.
Previous research has shown that the active ingredients of PPM™ penetrate the fungus or the bacterium cell wall and inhibit the activity of key enzymes within the central metabolic cycles such as the citric acid cycle and the electron transport chain. Our data indicates that PPM™ may also inhibit the transport of monosaccharides and amino acids from the medium into the fungus or bacterium cells.
As in any biocide, a critical ratio of PPM™ molecules per microbial cell is needed to eliminate bacteria and fungi.
ADVANTAGES OVER ANTIBIOTICS
PPM™ is broad-based and effective against fungi.
PPM™ is less expensive than antibiotics, making it affordable for wide and routine use.
Since PPM™ targets and inhibits multiple enzymes, the formation of resistant mutants towards PPM is unlikely.
PPM™ is heat stable and in general can be autoclaved with media.
Contamination free culture growing on MS + BA (5.0 μM) + NAA (0.5 μM) a supplemented with CuSO4 (10.0 μM), b supplemented with CuSO4 (20.0 μM
Effect of different concentrations of CuSO4 on chlorophyll content of E. variegata cultures, after 8 weeks of incubation.
Phytagel is an agar substitute produced from a bacterial substrate composed of glucuronic acid, rhamnose and glucose
It produces a clear, colorless, high -strength gel, which aids in detection of microbial contamination.
Phytagel provides an economical alternative to agar as a gelling agent
Use Phytagel at a concentration of 1.5-2.5 g/L. It should be added to rapidly stirring culture medium at room temperature to prevent clumping
.
Shoot cultures habituated for cytokinin would continue to produce new shoots on a cytokinin-free medium
Shoot cultures habituated for cytokinin would continue to produce new shoots on a cytokinin-free medium
using weaning chamber with scheduled misting system to maintain humidity
Shoot cultures habituated for cytokinin would continue to produce new shoots on a cytokinin-free medium
Phytosanitary Certificate is a certificate that certifies plant and plant products are free from regulated pests, and conforms with other phytosanitary requirements as specified from the importing country.
Genetic fidelity is the maintenance of the genetic constitution of a particular clone through its life span
A newly developed and novel DNA marker technique, i.e. start codon targeted (SCoT) polymorphic based on the short conserved region in plant genes surrounding the ATG translation start (or initiation) codon
SCoT marker PCR amplification profiles indicated dominant marker like RAPD markers. But advantage over RAPD is that they are reproducbile
This method uses single 18-mer primers in single primer polymerase chain reaction (PCR) and an annealing temperature of 50°C
PCR amplicons are resolved using standard agarose gel electrophoresis