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igam4er - International Game Competition for Education & Research
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Udock igam4er
1.
http://udock.fr
2.
Who ?
3.
Matthieu Montes CNAM GBA Guillaume Levieux CNAM CEDRIC
4.
5.
6.
video
7.
Why ?
8.
9.
10.
11.
How ?
12.
Gamification • Electrostatics
13.
Gamification • Shape
14.
Gamification • Grapnels and touch
like interface
15.
Gamification • Realtime feedbacks
16.
Gamification • Enrich
17.
Then ?
18.
Player behavior modeling • Online log of every
in game action • Online log of best poses • Offline analysis to : – Find interesting solutions from naive users – Find new heuristics for docking algorithms – Feed the design process
19.
Quick and dirty prototyping Protein coordinate file (PDB) Chimera DockPrep Deleting waters Repairing side‐chains Adding hydrogens Assigning partial charges Writing in mol2 format Protein coordinate file (mol2) Udock loader Generation of the 3D mesh Generation of the SES Coloration of the SES Protein 3D object Bullet Generation of the collision mesh Interactive Protein object Protein coordinate file (PDB)
20.
Teaching
21.
Validation
22.
Further work • Gamification
process • Offline version for researchers • Multiple vizualisation methods
23.
Thanks ! Questions ?
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