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Zhiyong Lu, 陆致用
NCBI, NLM, NIH
AMIA
Washington D.C.
November 2017
The views and opinions expressed do not
necessarily state or reflect those of the U.S.
Government, and they may not be used for
advertising or product endorsement purposes.
Funding: supported by NIH Intramural Program, National Library of Medicine
¡ National Center for Biotechnology Information (NCBI)
¡ Created in 1988 by U.S. congress
¡ A division of the National Library of Medicine (NLM),
one of the institutes of National Institutes of Health
(NIH)
¡ Located at NIH main campus in Bethesda, Maryland
3
4
5
Literature	is	the	primary	repository	of	knowledge
If I have seen further it is by standing on the shoulders of giants – Newton
6
North
America
40%
South
America
4%
Asia
25%
Oceania
4%
Africa
4%
Europe
23%
PubMed Daily Usage
Ø27+ million articles
Ø2.5 million users daily
Ø~ 3 million searches
Ø 9 million page views
¡ PubMed
¡ PubMed Central (PMC)
¡ PubMed Health
¡ Bookshelf
¡ NIHMS
¡ ClinicalTrials.gov
¡ PubMed Labs 7
¡ PubMed Labs is a test site where we
are experimenting with new features and
tools that eventually may be incorporated in
PubMed, in their current or a revised form
based on the input we receive. Please try the
site and let us know what you think.
8
¡ To improve search quality: help users to find
the most relevant & high-quality information
efficiently
¡ To improve usability: help users to have
better experience with their literature needs
9
10
11
12
27M articles
1M each year
2 per minute
Image: goo.gl/FLCjZP
13
¡ “The best place to hide a dead body is page 2
of search results”
Most (>80%) clicks happened in top 20 positions.
Over half of PubMed queries return more than 20 results.
14
150+ features
15
16
17
76% 21%
DESKTOP MOBILE TABLET [3%]
¡ MinimumViable Product
§ Only include core features
§ Build it cheaply and quickly
§ Evaluate it with real users using controlled experiments
§ Iteratively improve it
¡ FAQ: Why are some PubMed functions (e.g.
MyNCBI) missing in PubMed Labs?
Please note that PubMed Labs includes only a limited set of
features, and not the full set of PubMed tools. Fear not – the
absence of a PubMed tool in PubMed Labs does not mean it
is planned for elimination.
18
¡ User interviews
¡ Direct user comments
¡ A/B testing
§ Controlled experiments with real users
§ Randomly split traffic btw 2 groups
§ A (Related article) vs. B (Similar article)
19
¡ Labs is NOT the new PubMed but rather
§ MVP with limited features
§ Sandbox for trying new features
§ Platform for seeking user input
¡ Current & future work
§ To conduct a/b tests
§ To include additional search functions
20
NLM & NCBI Leaderships
PubMed LabsTeam: Rost Bryzgunov, Kathi Canese, Nicolas Fiorini, Evgeny Kireev, Asta
Gindulyte, Martin Latterner,Vadim Miller, Maxim Osipov, Jane Radetska, Grisha Starchenko
And many others at NLM/NCBI and beyond!!
Contact:
zhiyong.lu@nih.gov
22
https://pubmed.gov/labs

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PubMed Labs: A new test site for improving literature search

  • 1. Zhiyong Lu, 陆致用 NCBI, NLM, NIH AMIA Washington D.C. November 2017
  • 2. The views and opinions expressed do not necessarily state or reflect those of the U.S. Government, and they may not be used for advertising or product endorsement purposes. Funding: supported by NIH Intramural Program, National Library of Medicine
  • 3. ¡ National Center for Biotechnology Information (NCBI) ¡ Created in 1988 by U.S. congress ¡ A division of the National Library of Medicine (NLM), one of the institutes of National Institutes of Health (NIH) ¡ Located at NIH main campus in Bethesda, Maryland 3
  • 4. 4
  • 5. 5 Literature is the primary repository of knowledge If I have seen further it is by standing on the shoulders of giants – Newton
  • 6. 6 North America 40% South America 4% Asia 25% Oceania 4% Africa 4% Europe 23% PubMed Daily Usage Ø27+ million articles Ø2.5 million users daily Ø~ 3 million searches Ø 9 million page views
  • 7. ¡ PubMed ¡ PubMed Central (PMC) ¡ PubMed Health ¡ Bookshelf ¡ NIHMS ¡ ClinicalTrials.gov ¡ PubMed Labs 7
  • 8. ¡ PubMed Labs is a test site where we are experimenting with new features and tools that eventually may be incorporated in PubMed, in their current or a revised form based on the input we receive. Please try the site and let us know what you think. 8
  • 9. ¡ To improve search quality: help users to find the most relevant & high-quality information efficiently ¡ To improve usability: help users to have better experience with their literature needs 9
  • 10. 10
  • 11. 11
  • 12. 12 27M articles 1M each year 2 per minute Image: goo.gl/FLCjZP
  • 13. 13 ¡ “The best place to hide a dead body is page 2 of search results” Most (>80%) clicks happened in top 20 positions. Over half of PubMed queries return more than 20 results.
  • 15. 15
  • 16. 16
  • 18. ¡ MinimumViable Product § Only include core features § Build it cheaply and quickly § Evaluate it with real users using controlled experiments § Iteratively improve it ¡ FAQ: Why are some PubMed functions (e.g. MyNCBI) missing in PubMed Labs? Please note that PubMed Labs includes only a limited set of features, and not the full set of PubMed tools. Fear not – the absence of a PubMed tool in PubMed Labs does not mean it is planned for elimination. 18
  • 19. ¡ User interviews ¡ Direct user comments ¡ A/B testing § Controlled experiments with real users § Randomly split traffic btw 2 groups § A (Related article) vs. B (Similar article) 19
  • 20. ¡ Labs is NOT the new PubMed but rather § MVP with limited features § Sandbox for trying new features § Platform for seeking user input ¡ Current & future work § To conduct a/b tests § To include additional search functions 20
  • 21. NLM & NCBI Leaderships PubMed LabsTeam: Rost Bryzgunov, Kathi Canese, Nicolas Fiorini, Evgeny Kireev, Asta Gindulyte, Martin Latterner,Vadim Miller, Maxim Osipov, Jane Radetska, Grisha Starchenko And many others at NLM/NCBI and beyond!!