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Submitted by
Saurabh Gupta
21301148
M. Pharma 1st Semester
Submitted to
DR. Om Silakari Sir
Department of Pharmaceutical Sciences and Drug Research
Punjabi University, Patiala
Lead Optimization Of Macrolide Drug
Content
• Introduction
• MOA of Antibiotic
• Macrolides- General Consideration
• Mechanism of Action of Macrolide Antibiotics
• Inhibition Of Protein Synthesis
• Chemistry of Macrolides
• Classification of Macrolide Antibiotics
• Structure Activity Relationship
• Lead Optimization
• Structure of Macrolide Drug
• Roxithromycin
• Erythromycin
• Macrolide Indications
Antibiotics (From ancient Greek Antiviotika) also called
antibacterials, are a type of antimicrobial drug used in the
treatment and prevention of bacterial infections. They may either
kill or inhibit the growth of bacteria. Antibiotics are mainly
obtained from natural sources.
ANTIBIOTICS
 Macrolides are a class of antibiotics which contain macrocyclic
lactone ring attached to deoxy sugar.
 These antibiotics are bacteriostatic in nature & act by inhibiting
protein synthesis of bacteria.
 They prevent peptidyl transferase from adding the growin
peptide attached to tRNA to the next amino acid. They bind
reversibly to the P site of the 50s subunit of the ribosomes.
 These are obtained mainly from certain actinomycetes genus,
such as streptomyces.
 Example:- Erythromycin, Clarithromycin, Azithromycin,
Telithromycin etc.
Macrolides- General Consideration
• Macrolide is a protein synthesis inhibitor
Macrolide bind to 50S
ribosomal sub-unit
Inhibit polypeptide chain
elongation & protein
synthesis inhibiton
Result in inhibition of
growth & multiplication.
• Generally it is bacteriostatic in action but
acts as bacteriocidal at higher dose.
Mechanism of Action of Macrolide Antibiotics
Clarithromycin
binds to 50S r-RNA and inhibit
formation of peptide bond
Erythromycin
Binds to 50S r-RNA and prevents
movement along m-RNA
Azithromycin
Interfers with t-RNA anticodon
reading of m-RNA codon
Roxithromycin
Changes shape of 30S r-RNA and
causes m-RNA to be read
incorrectly
Inhibition Of Protein Synthesis
Macrolides structurally contain three
characteristic parts in every molecule
 A macrocyclic lactone ring containing
14 or 16 carbons usually.
 Multiple ketone group (O=) &
hydroxyl group (-OH).
 Two deoxy sugars attached by
glycosidic bond with lactone ring.
Chemistry of Macrolides
Macrolide
Antibiotics
14-
Membered
ring
Natural
Erythromycin
Oleandomycin
Semi synthetic
Roxithromycin
Clarithromycin
15-
Membered
ring
Semi synthetic
Azithromycin
16-
Membered
ring
Natural
Josamycin
Spiramycin
Midecamycin
Semi-synthetic
Miokamycin
Rokitamycin
Classification of Macrolide Antibiotics
Structure Activity Relationship
 A lactone ring, ketonic group and an
amino sugar are the basic
characteristic groups that are desired
for activity.
 Amino sugar must be glycosidically
bonded
 Dimethyl amino group provides basic
properties to macrolides.
 Lactone ring contain 12, 14, 16 atoms
in cyclic ring along with olephinic
group.
Structure Activity Relationship
 C-2 F is more active and less toxic & enhance Pharmacokinetic
Properties.
 C-6 OH- group replaced by OCH3 , Clarithromycin → Acid Stable.
 C-8 methyl group replaced by F, Flurithromycin →Acid Stable
 C-9 , Formation of Oxime (=NOH) / Hydrazine (=NNH2) →
Increased Lipophilicity activity & toxicity → Roxithromycin (-
CH2OC2H2OCH3)
 C-9 , Formation of azilide → No GI cramping , Better
Pharmacokinetic properties → Azithromycin.
 C-11, 12, Cyclic Carbonate/ Carbamate → Increased Potency & acid
stability
In Cladinose
 C-3’ Introduction of F less Activity
 C-4’, OH – Replaced by NH2 active against gram negative bacteria.
In desosamine
 C-3”, dimethyl amino group → Important → Acid Salts → Acid
stable.
 C-2” , OH- group are important ester → acid stable.
Lead Optimization
Conversion to amines
Conversion to oxime
Ring Expansion
Conversion to 11, 12-
cyclic derivatives
Replacement of hydrogen Alkylation of hydroxyl group
Cut Cladinose to ketolides
Lead Optimization
 Alkylation at C-6 provides acidic stability.
 Ring expansion is done by Beckmann rearrangement and is effective against
erythromycin a resistance strain.
Ketolides
 Semisynthetic derivatives of erythromycin A
 Highly stable in acidic environment.
 Overcome erythromycin A resistance.
 Unable to induce MLSB resistance (Macrolide-lincosamide-streptogramin
B)
Specific Features
 3-Keto Function (Lack L-Cladinose)
 Side Chain C11-C12
• A number of strategies have been utilized to improve the acid stability of
erythromycin.
• The first approach involved the addition of hydroxylamine to the ketone to
form oxime – e.g., Roxithromycin.
• The second approach involves an alteration of C-6 hydroxyl group, which is
the nucleophilic functionality that initiates erythromycin degradation.
Modification that removes the nucleophilic nature of this hydroxyl group
can retain antibacterial properties if the size of kept small so as not to affect
the ribosomal binding- e.g. Clarithromycin
• The azalides (E.g. azithromycin) are semi- synthetic 15-membered
congeners in which a nitrogen atom has been introduced to expand a 14-
numbered precursor, and this leads to an extended spectrum of action.
Lead Optimization
Macrolide Drug X R
Erythromycin O H
Roxithromycin NOCH2O(CH2)2OCH3 H
Clarithromycin O CH3
Structure of Macrolide Drug
Biological source:- Clarithromycin, a
semisynthetic macrolide antibiotic derived from
erythromycin
Mechanism of Action:- Clarithromycin is first
metabolized to 14-OH clarithromycin, which is active
and works synergistically with its parent compound.
Like other macrolides, it then penetrates bacteria cell
wall and reversibly binds to domain V of the 23S
ribosomal RNA of the 50S subunit of the bacterial
ribosome, blocking translocation of aminoacyl
transferase RNA and polypeptide synthesis.
Clarithromycin also inhibits the hepatic microsomal
CYP3A4 isoenzyme and P-glycoprotein, an energy-
dependent drug efflux pump.
Clarithromycin
• Biological source:- Roxithromycin
is a semi-synthetic derivative of the
macrolide antibiotic erythromycin
that includes an N-oxime side chain
on the lactone ring with antibacterial
and anti- malarial activities.
• Mechanism of Action:-
Roxithromycin prevents bacterial
growth by interfering with their
protein synthesis. It binds to the 50S
subunit of bacterial ribosomes and
inhibits the translocation of peptides.
Roxithromycin
 Upper respiratory tract infections- pharyngitis, tonsillitis, sore throat,
whooping cough etc.
 Lower respiratory tract infections- pneumonia, mycoplasma,
pneumonia, community derived pneumonia, anthrax etc.
 COPD
 Sinusitis
 Peptic ulcer treatment for eradication of H. pylori in triple therapy.
 Skin & soft tissue infection
 MAC (Mycobacterium avium complex) infections in AIDS
 Gonorrhea
 Conjunctivitis
 Lyme disease
Macrolide Indications
Lead Optimization of Macrolide Antibiotics

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Lead Optimization of Macrolide Antibiotics

  • 1. Submitted by Saurabh Gupta 21301148 M. Pharma 1st Semester Submitted to DR. Om Silakari Sir Department of Pharmaceutical Sciences and Drug Research Punjabi University, Patiala Lead Optimization Of Macrolide Drug
  • 2. Content • Introduction • MOA of Antibiotic • Macrolides- General Consideration • Mechanism of Action of Macrolide Antibiotics • Inhibition Of Protein Synthesis • Chemistry of Macrolides • Classification of Macrolide Antibiotics • Structure Activity Relationship • Lead Optimization • Structure of Macrolide Drug • Roxithromycin • Erythromycin • Macrolide Indications
  • 3. Antibiotics (From ancient Greek Antiviotika) also called antibacterials, are a type of antimicrobial drug used in the treatment and prevention of bacterial infections. They may either kill or inhibit the growth of bacteria. Antibiotics are mainly obtained from natural sources. ANTIBIOTICS
  • 4.
  • 5.  Macrolides are a class of antibiotics which contain macrocyclic lactone ring attached to deoxy sugar.  These antibiotics are bacteriostatic in nature & act by inhibiting protein synthesis of bacteria.  They prevent peptidyl transferase from adding the growin peptide attached to tRNA to the next amino acid. They bind reversibly to the P site of the 50s subunit of the ribosomes.  These are obtained mainly from certain actinomycetes genus, such as streptomyces.  Example:- Erythromycin, Clarithromycin, Azithromycin, Telithromycin etc. Macrolides- General Consideration
  • 6. • Macrolide is a protein synthesis inhibitor Macrolide bind to 50S ribosomal sub-unit Inhibit polypeptide chain elongation & protein synthesis inhibiton Result in inhibition of growth & multiplication. • Generally it is bacteriostatic in action but acts as bacteriocidal at higher dose. Mechanism of Action of Macrolide Antibiotics
  • 7. Clarithromycin binds to 50S r-RNA and inhibit formation of peptide bond Erythromycin Binds to 50S r-RNA and prevents movement along m-RNA Azithromycin Interfers with t-RNA anticodon reading of m-RNA codon Roxithromycin Changes shape of 30S r-RNA and causes m-RNA to be read incorrectly Inhibition Of Protein Synthesis
  • 8. Macrolides structurally contain three characteristic parts in every molecule  A macrocyclic lactone ring containing 14 or 16 carbons usually.  Multiple ketone group (O=) & hydroxyl group (-OH).  Two deoxy sugars attached by glycosidic bond with lactone ring. Chemistry of Macrolides
  • 10. Structure Activity Relationship  A lactone ring, ketonic group and an amino sugar are the basic characteristic groups that are desired for activity.  Amino sugar must be glycosidically bonded  Dimethyl amino group provides basic properties to macrolides.  Lactone ring contain 12, 14, 16 atoms in cyclic ring along with olephinic group.
  • 11. Structure Activity Relationship  C-2 F is more active and less toxic & enhance Pharmacokinetic Properties.  C-6 OH- group replaced by OCH3 , Clarithromycin → Acid Stable.  C-8 methyl group replaced by F, Flurithromycin →Acid Stable  C-9 , Formation of Oxime (=NOH) / Hydrazine (=NNH2) → Increased Lipophilicity activity & toxicity → Roxithromycin (- CH2OC2H2OCH3)  C-9 , Formation of azilide → No GI cramping , Better Pharmacokinetic properties → Azithromycin.  C-11, 12, Cyclic Carbonate/ Carbamate → Increased Potency & acid stability In Cladinose  C-3’ Introduction of F less Activity  C-4’, OH – Replaced by NH2 active against gram negative bacteria. In desosamine  C-3”, dimethyl amino group → Important → Acid Salts → Acid stable.  C-2” , OH- group are important ester → acid stable.
  • 12. Lead Optimization Conversion to amines Conversion to oxime Ring Expansion Conversion to 11, 12- cyclic derivatives Replacement of hydrogen Alkylation of hydroxyl group Cut Cladinose to ketolides
  • 13. Lead Optimization  Alkylation at C-6 provides acidic stability.  Ring expansion is done by Beckmann rearrangement and is effective against erythromycin a resistance strain. Ketolides  Semisynthetic derivatives of erythromycin A  Highly stable in acidic environment.  Overcome erythromycin A resistance.  Unable to induce MLSB resistance (Macrolide-lincosamide-streptogramin B) Specific Features  3-Keto Function (Lack L-Cladinose)  Side Chain C11-C12
  • 14. • A number of strategies have been utilized to improve the acid stability of erythromycin. • The first approach involved the addition of hydroxylamine to the ketone to form oxime – e.g., Roxithromycin. • The second approach involves an alteration of C-6 hydroxyl group, which is the nucleophilic functionality that initiates erythromycin degradation. Modification that removes the nucleophilic nature of this hydroxyl group can retain antibacterial properties if the size of kept small so as not to affect the ribosomal binding- e.g. Clarithromycin • The azalides (E.g. azithromycin) are semi- synthetic 15-membered congeners in which a nitrogen atom has been introduced to expand a 14- numbered precursor, and this leads to an extended spectrum of action. Lead Optimization
  • 15. Macrolide Drug X R Erythromycin O H Roxithromycin NOCH2O(CH2)2OCH3 H Clarithromycin O CH3 Structure of Macrolide Drug
  • 16. Biological source:- Clarithromycin, a semisynthetic macrolide antibiotic derived from erythromycin Mechanism of Action:- Clarithromycin is first metabolized to 14-OH clarithromycin, which is active and works synergistically with its parent compound. Like other macrolides, it then penetrates bacteria cell wall and reversibly binds to domain V of the 23S ribosomal RNA of the 50S subunit of the bacterial ribosome, blocking translocation of aminoacyl transferase RNA and polypeptide synthesis. Clarithromycin also inhibits the hepatic microsomal CYP3A4 isoenzyme and P-glycoprotein, an energy- dependent drug efflux pump. Clarithromycin
  • 17. • Biological source:- Roxithromycin is a semi-synthetic derivative of the macrolide antibiotic erythromycin that includes an N-oxime side chain on the lactone ring with antibacterial and anti- malarial activities. • Mechanism of Action:- Roxithromycin prevents bacterial growth by interfering with their protein synthesis. It binds to the 50S subunit of bacterial ribosomes and inhibits the translocation of peptides. Roxithromycin
  • 18.  Upper respiratory tract infections- pharyngitis, tonsillitis, sore throat, whooping cough etc.  Lower respiratory tract infections- pneumonia, mycoplasma, pneumonia, community derived pneumonia, anthrax etc.  COPD  Sinusitis  Peptic ulcer treatment for eradication of H. pylori in triple therapy.  Skin & soft tissue infection  MAC (Mycobacterium avium complex) infections in AIDS  Gonorrhea  Conjunctivitis  Lyme disease Macrolide Indications