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BIO60704
GENES AND TISSUE CULTURE TECHNOLOGY
PRESENTATION TITLE :
DISCUSS AN EXAMPLE OF KNOCK OUT MOUSE
MODEL USED FOR DISEASE MODELLING
Module Lecturer: Dr. Yap Wei Hsum
Student Name:
Mong Jia Ai (0326343)
Sharon Rachel Wong (0326642)
Saniika A/P Renganadan (0326340)
Jesvinder Jeet Kaur (0327298)
WHAT IS GENE TARGETING?
• A method for modifying the structure of a
specific gene without removing it from its
natural environment in the chromosome of
a living cell.
• Involves in the construction of a piece of
DNA, known as a gene targeting vector ,
which is then introduced into the cell where
it replaces or modifies the normal
chromosomal gene through the process of
homologous recombination (McQueen,
2018).
• Homologous recombination in embryonic
stem cells to modify the mouse genome at a
specific locus.
• Generating a piece of DNA that is identical to
the locus of interest and this engineered
piece is swapped in to replace the original
piece of DNA.
• Even with this selection, most of the surviving
ES cells have integrated the new piece of DNA
at a random locus rather than recombining it
at the correct locus of interest.
• Due to this, ES cells showing resistance to the
selective agent must also be screened by
Southern blot or by PCR to discover which
clones have been correctly targeted (Koch
Institute for Integrative Cancer Research at
MIT, n.d.).
WHAT IS KNOCK IN AND KNOCK OUT MOUSE?
Knock In Mouse
• To study the exogenous expression of a
protein.
• A knock in mouse is generated by targeted
insertion of the transgene at a selected
locus (Koch Institute for Integrative Cancer
Research at MIT, n.d.).
• A gene sequence of interest is altered by
one-for-one substitution with a transgene,
or by adding gene sequences that are not
found within the locus (genOway, n.d.)
Knock Out Mouse
• Researchers have inactivated, or "knocked
out," an existing gene by replacing it or
disrupting it with an artificial piece of DNA.
• The loss of gene activity often causes
changes in a mouse’s phenotype which
includes appearance, behaviour and other
observable physical and biochemical
characteristics (National Human Genome
Research Institute, 2015).
RESEARCHERS WHO DEVELOPED THE TECHNOLOGY FOR THE
CREATION OF KNOCKOUT MICE WON THE NOBEL PRIZE IN THE YEAR
2007
• The Nobel Prize in Physiology or Medicine 2007 was awarded jointly to Dr Mario R.
Capecchi, Dr Martin J. Evans and Dr Oliver Smithies “for their discoveries of principles for
introducing specific gene modifications in mice by the use of embryonic stem cells (ES)”.
(1)
Dr Martin Evans
(Cultivation of ES Cells)
Dr Oliver Smithies
(Gene Knockout)
Dr Mario Capecchi
(Gene Targeting)
HOW KNOCK OUT MOUSE MODEL IS MADE?
• First strategy: Gene targeting or homologous recombination
(specifically manipulate a gene in the nucleus of an ES cell).
Introducing an artificial piece of DNA that shares identical, or
homologous, sequence to the gene.
This homologous sequence flanks the existing gene's DNA
sequence both upstream and downstream of the gene's
location on the chromosome.
• Second strategy: Gene trapping (a random process is used).
A piece of artificial DNA containing a reporter gene is
designed to insert randomly into any gene.
The inserted piece of artificial DNA prevents the cell's RNA
"splicing" machinery from working properly, thus preventing
the existing gene from producing its designated protein and
knocking out its function.
• Both consists of a modified viral vector or a linear fragment of
bacterial DNA. After the artificial DNA is inserted, the genetically
altered ES cells are grown in a lab dish for several days and
injected into early-stage mouse embryos (National Human
Genome Research Institute, 2015).
Source: Jargon Wall
ENHANCED MORTALITY TO METASTATIC BLADDER CANCER CELL LINE
MB49 IN VASOACTIVE INTESTINAL PEPTIDE GENE KNOCKOUT MICE
• To investigate if the metastatic bladder cancer is susceptible to
death with the absence of Vasoactive Intestinal Peptide (VIP) gene
using the knockout mice model (Mirsaidi et al., 2017).
• MB49 murine bladder cancer cell lines where utilized by injecting
into two strains of mice
• A Kaplan–Meier plot was constructed to compare control
C57BL/6 mice and C57BL/6 mice with MB49 vs. VIP KO controls
and VIP KO mice with MB49.
• VIP KO mice had increased mortality compared to C57BL/6 mice
at 4 weeks. The number of ulcers between both groups was not
statistically significant.
• In vitro studies confirms that the presence of VIP in high doses
reduced MB49 cell growth, as well as macrophage inhibitory
factor (MIF), a growth factor in bladder cancer cells. Therefore,
the presence of VIP may accommodate the susceptibility to death
from bladder cancer, and that it manifests its effect through the
down regulation of MIF.
What is VIP?
• A therapeutic agent for bladder cancer, which is a 28-
amino acid peptide that has multiple use of treatment such
as bronchodilatory and anti-inflammatory properties
(Mirsaidi et al., 2017).
• VIP obstructs the proliferation of small-cell lung cancer in
vitro and in vivo in mice and is proven to promote the
nuclear expression of p53 in mouse renal cell carcinomas.
Loss of expression of p53, a tumour suppressor, and its
analogs leads to tumour growth and can also be found in
patients with bladder cancer.
• Using a mouse bladder cancer cell line, MB49, a model is
designed using leg injections of the cancer cells to
investigate if the loss of VIP gene conducts increased
mortality and/or morbidity from bladder cancer
metastases, compared to control C57BL/6 mice.
• An in vitro analysis is conducted to study the effect of VIP
on MB49 cells. It is hypothesized that VIP would diminish
cell growth by decreasing the activity of macrophage
inhibitory factor (MIF), a known growth factor in bladder
cancer cells(Mirsaidi et al., 2017).
RESULTS AND DISCUSSION
• Compared to cells grown in the absence of
VIP, those grown in the presence of VIP
also showed decreased extracellular MIF
accumulation (Mirsaidi et al., 2017).
Tumour Measurement
• In Vitro MB49 cells grown in vitro in the
presence of 150 mg/ml VIP illustrated
decreased cell growth when compared to
cells grown in the absence of VIP (Mirsaidi
et al., 2017).
Figure 1. Vasoactive intestinal peptide (VIP) concentration-
dependent changes to bladder cancer cell count in vitro.
The growth in each group was significantly different from control
cells grown in the absence of VIP. p < 0.001 [multiple
comparisons vs. control group (Holm–Šidak method)].
Figure 2. Vasoactive intestinal peptide (VIP) concentration-
dependent changes to MIF in medium. The MIF
concentration in the cells treated with VIP 150 mg was
significantly reduced compared to controls (*p < 0.05).
• VIP KO mice have a higher mortality rate
with exposure to MB49 bladder cancer
cell line than C57BL/6 mice ; The
susceptibility to death from bladder
cancer is inhibited by VIP.
• Cell growth decreased, with the
administration of VIP to bladder cancer
cells cultured in vitro, indicating the role
of VIP in cell proliferation through VPAC1
receptor ; a dose dependent decrease in
the proliferation of the bladder cancer cell
line is seen, induced by VIP and the
elaboration of MIF is reduced, which is
known to increase cancer cell proliferation
and angiogenesis.
• Kaplan-Meier plot shows statistically
significant (p=0.002) increased
mortality among VIP KO mice injected
with MB49 bladder cancer, while other
mice (VIP KO controls, WT controls and
WT mice injected with cancer) survived
until the end of term; increased
mortality in VIP KO mice is not
associated with an increased number of
pulmonary metastases, weight loss or
tumour size (Mirsaidi et al., 2017).
CONCLUSION
• Vasoactive intestinal peptide KO mice have enhanced susceptibility to death from
MB49 bladder cancer.
• Despite the growth and spread of tumours in both VIP KO and C57BL/6 groups
injected with cancer cells, only VIP KO mice died prior to the end of the study.
• Neither VIP KO controls nor WT controls developed or succumbed to cancer.
• The Kaplan– Meier analysis further suggests that the lack of endogenous VIP
production significantly increases the likelihood of death to cancer.
• Both VIP KO and C57BL/6 bladder-injected mice had metastases to the lung;
however, larger and more numerous metastases were seen in C57BL/6 mice.
• Vasoactive intestinal peptide may potentially be a form of treatment of bladder
cancer.
Advantages of Knock Out Mouse Model
• Can be used as models for drugs and gene
therapies
• Relatively good models for human disease due to
similarity (85 % genetic similarity to human
genome)
• Very specific endogenous gene has been altered in
such way that it interferes with the normal
expression
• Provides insights into mutations further than
morphological (physiological and behaviourally)
Disadvantages of Knock Out Mouse Model
• Developmental lethality limits studies to embryonic
development – not all genetically altered embryo
can grow into adult mouse
• Unable to characterize last stage
neurodegenerative disorders
• Cost ineffective
• Phenotypic differences from mutations between
the mice and humans (Webprojects.oit.ncsu.edu,
2018).
Ethical Concerns of Knock Out Mouse Model
• Use of animals in science is a controversial issue.
• There are some moral or ethical factors
contributing to genetic manipulation.
REFERENCES
• Genetargeting.com. (2018). The Benefits and Drawbacks of the Transgenic Mouse Model. [online] Available at:
https://www.genetargeting.com/transgenic/transgenic-mouse-model/ [Accessed 22 Oct. 2018].
•
genOway. (n.d.). Knockin Mouse Models. [online] Available at: https://www.genoway.com/services/customized-
mouse/knockin-models/overview.htm [Accessed 21 Oct. 2018].
• Koch Institute for Integrative Cancer Research at MIT. (n.d.). Knockins and Knockouts. [online] Available at:
https://ki.mit.edu/sbc/escell/models/knock [Accessed 19 Oct. 2018].
• McQueen, C. (2018). Comprehensive toxicology. 3rd ed. Oxford, UK: Elsevier, p.709.
• Mirsaidi, N., Burns, M., McClain, S., Forsyth, E., Li, J., Dukes, B., Lin, D., Nahvi, R., Giraldo, J., Patton, M., Wang, P., Lin, K., Miller,
E., Ratliff, T., Hamidi, S., Crist, S., Takemaru, K. and Szema, A. (2017). Enhanced Mortality to Metastatic Bladder Cancer Cell
Line MB49 in Vasoactive Intestinal Peptide Gene Knockout Mice. Frontiers in Endocrinology, [online] 8, pp.1-6. Available at:
<https://www.frontiersin.org/articles/10.3389/fendo.2017.00162/full> [Accessed 21 Oct. 2018].
• National Human Genome Research Institute. (2015). Knockout Mice. [online] Available at:
https://www.genome.gov/12514551/knockout-mice-fact-sheet/ [Accessed 19 Oct. 2018].
• Samarasinghe, B. (2013). The Knockout Mouse. [online] Jargon Wall. Available at: https://www.jargonwall.com/molecular-
biology/knockout-mouse/ [Accessed 21 Oct. 2018].
• Webprojects.oit.ncsu.edu. (2018). genome.gov | Knockout Mice. [online] Available at:
http://webprojects.oit.ncsu.edu/project/bio183de/Black/genetech2/genetech2_news/knockouts.html [Accessed 22 Oct.
2018].
• Yang, B. (2018). Three scientists who invented gene knockout technology won Lasker Basic Medical Research Award.
[online] Discoverymedicine.com. Available at: http://www.discoverymedicine.com/Benjamin-Yang/2009/05/10/three-
scientists-who-invented-gene-knockout-technology-won-lasker-basic-medical-research-award/ [Accessed 22 Oct. 2018].

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Discuss an example of knockout mouse model used for disease modelling (Metastatic Bladder Cancer)

  • 1. BIO60704 GENES AND TISSUE CULTURE TECHNOLOGY PRESENTATION TITLE : DISCUSS AN EXAMPLE OF KNOCK OUT MOUSE MODEL USED FOR DISEASE MODELLING Module Lecturer: Dr. Yap Wei Hsum Student Name: Mong Jia Ai (0326343) Sharon Rachel Wong (0326642) Saniika A/P Renganadan (0326340) Jesvinder Jeet Kaur (0327298)
  • 2. WHAT IS GENE TARGETING? • A method for modifying the structure of a specific gene without removing it from its natural environment in the chromosome of a living cell. • Involves in the construction of a piece of DNA, known as a gene targeting vector , which is then introduced into the cell where it replaces or modifies the normal chromosomal gene through the process of homologous recombination (McQueen, 2018). • Homologous recombination in embryonic stem cells to modify the mouse genome at a specific locus. • Generating a piece of DNA that is identical to the locus of interest and this engineered piece is swapped in to replace the original piece of DNA. • Even with this selection, most of the surviving ES cells have integrated the new piece of DNA at a random locus rather than recombining it at the correct locus of interest. • Due to this, ES cells showing resistance to the selective agent must also be screened by Southern blot or by PCR to discover which clones have been correctly targeted (Koch Institute for Integrative Cancer Research at MIT, n.d.).
  • 3. WHAT IS KNOCK IN AND KNOCK OUT MOUSE? Knock In Mouse • To study the exogenous expression of a protein. • A knock in mouse is generated by targeted insertion of the transgene at a selected locus (Koch Institute for Integrative Cancer Research at MIT, n.d.). • A gene sequence of interest is altered by one-for-one substitution with a transgene, or by adding gene sequences that are not found within the locus (genOway, n.d.) Knock Out Mouse • Researchers have inactivated, or "knocked out," an existing gene by replacing it or disrupting it with an artificial piece of DNA. • The loss of gene activity often causes changes in a mouse’s phenotype which includes appearance, behaviour and other observable physical and biochemical characteristics (National Human Genome Research Institute, 2015).
  • 4. RESEARCHERS WHO DEVELOPED THE TECHNOLOGY FOR THE CREATION OF KNOCKOUT MICE WON THE NOBEL PRIZE IN THE YEAR 2007 • The Nobel Prize in Physiology or Medicine 2007 was awarded jointly to Dr Mario R. Capecchi, Dr Martin J. Evans and Dr Oliver Smithies “for their discoveries of principles for introducing specific gene modifications in mice by the use of embryonic stem cells (ES)”. (1) Dr Martin Evans (Cultivation of ES Cells) Dr Oliver Smithies (Gene Knockout) Dr Mario Capecchi (Gene Targeting)
  • 5. HOW KNOCK OUT MOUSE MODEL IS MADE? • First strategy: Gene targeting or homologous recombination (specifically manipulate a gene in the nucleus of an ES cell). Introducing an artificial piece of DNA that shares identical, or homologous, sequence to the gene. This homologous sequence flanks the existing gene's DNA sequence both upstream and downstream of the gene's location on the chromosome. • Second strategy: Gene trapping (a random process is used). A piece of artificial DNA containing a reporter gene is designed to insert randomly into any gene. The inserted piece of artificial DNA prevents the cell's RNA "splicing" machinery from working properly, thus preventing the existing gene from producing its designated protein and knocking out its function. • Both consists of a modified viral vector or a linear fragment of bacterial DNA. After the artificial DNA is inserted, the genetically altered ES cells are grown in a lab dish for several days and injected into early-stage mouse embryos (National Human Genome Research Institute, 2015). Source: Jargon Wall
  • 6. ENHANCED MORTALITY TO METASTATIC BLADDER CANCER CELL LINE MB49 IN VASOACTIVE INTESTINAL PEPTIDE GENE KNOCKOUT MICE • To investigate if the metastatic bladder cancer is susceptible to death with the absence of Vasoactive Intestinal Peptide (VIP) gene using the knockout mice model (Mirsaidi et al., 2017). • MB49 murine bladder cancer cell lines where utilized by injecting into two strains of mice • A Kaplan–Meier plot was constructed to compare control C57BL/6 mice and C57BL/6 mice with MB49 vs. VIP KO controls and VIP KO mice with MB49. • VIP KO mice had increased mortality compared to C57BL/6 mice at 4 weeks. The number of ulcers between both groups was not statistically significant. • In vitro studies confirms that the presence of VIP in high doses reduced MB49 cell growth, as well as macrophage inhibitory factor (MIF), a growth factor in bladder cancer cells. Therefore, the presence of VIP may accommodate the susceptibility to death from bladder cancer, and that it manifests its effect through the down regulation of MIF. What is VIP? • A therapeutic agent for bladder cancer, which is a 28- amino acid peptide that has multiple use of treatment such as bronchodilatory and anti-inflammatory properties (Mirsaidi et al., 2017). • VIP obstructs the proliferation of small-cell lung cancer in vitro and in vivo in mice and is proven to promote the nuclear expression of p53 in mouse renal cell carcinomas. Loss of expression of p53, a tumour suppressor, and its analogs leads to tumour growth and can also be found in patients with bladder cancer. • Using a mouse bladder cancer cell line, MB49, a model is designed using leg injections of the cancer cells to investigate if the loss of VIP gene conducts increased mortality and/or morbidity from bladder cancer metastases, compared to control C57BL/6 mice. • An in vitro analysis is conducted to study the effect of VIP on MB49 cells. It is hypothesized that VIP would diminish cell growth by decreasing the activity of macrophage inhibitory factor (MIF), a known growth factor in bladder cancer cells(Mirsaidi et al., 2017).
  • 7. RESULTS AND DISCUSSION • Compared to cells grown in the absence of VIP, those grown in the presence of VIP also showed decreased extracellular MIF accumulation (Mirsaidi et al., 2017). Tumour Measurement • In Vitro MB49 cells grown in vitro in the presence of 150 mg/ml VIP illustrated decreased cell growth when compared to cells grown in the absence of VIP (Mirsaidi et al., 2017). Figure 1. Vasoactive intestinal peptide (VIP) concentration- dependent changes to bladder cancer cell count in vitro. The growth in each group was significantly different from control cells grown in the absence of VIP. p < 0.001 [multiple comparisons vs. control group (Holm–Šidak method)]. Figure 2. Vasoactive intestinal peptide (VIP) concentration- dependent changes to MIF in medium. The MIF concentration in the cells treated with VIP 150 mg was significantly reduced compared to controls (*p < 0.05).
  • 8. • VIP KO mice have a higher mortality rate with exposure to MB49 bladder cancer cell line than C57BL/6 mice ; The susceptibility to death from bladder cancer is inhibited by VIP. • Cell growth decreased, with the administration of VIP to bladder cancer cells cultured in vitro, indicating the role of VIP in cell proliferation through VPAC1 receptor ; a dose dependent decrease in the proliferation of the bladder cancer cell line is seen, induced by VIP and the elaboration of MIF is reduced, which is known to increase cancer cell proliferation and angiogenesis.
  • 9. • Kaplan-Meier plot shows statistically significant (p=0.002) increased mortality among VIP KO mice injected with MB49 bladder cancer, while other mice (VIP KO controls, WT controls and WT mice injected with cancer) survived until the end of term; increased mortality in VIP KO mice is not associated with an increased number of pulmonary metastases, weight loss or tumour size (Mirsaidi et al., 2017).
  • 10. CONCLUSION • Vasoactive intestinal peptide KO mice have enhanced susceptibility to death from MB49 bladder cancer. • Despite the growth and spread of tumours in both VIP KO and C57BL/6 groups injected with cancer cells, only VIP KO mice died prior to the end of the study. • Neither VIP KO controls nor WT controls developed or succumbed to cancer. • The Kaplan– Meier analysis further suggests that the lack of endogenous VIP production significantly increases the likelihood of death to cancer. • Both VIP KO and C57BL/6 bladder-injected mice had metastases to the lung; however, larger and more numerous metastases were seen in C57BL/6 mice. • Vasoactive intestinal peptide may potentially be a form of treatment of bladder cancer.
  • 11. Advantages of Knock Out Mouse Model • Can be used as models for drugs and gene therapies • Relatively good models for human disease due to similarity (85 % genetic similarity to human genome) • Very specific endogenous gene has been altered in such way that it interferes with the normal expression • Provides insights into mutations further than morphological (physiological and behaviourally) Disadvantages of Knock Out Mouse Model • Developmental lethality limits studies to embryonic development – not all genetically altered embryo can grow into adult mouse • Unable to characterize last stage neurodegenerative disorders • Cost ineffective • Phenotypic differences from mutations between the mice and humans (Webprojects.oit.ncsu.edu, 2018). Ethical Concerns of Knock Out Mouse Model • Use of animals in science is a controversial issue. • There are some moral or ethical factors contributing to genetic manipulation.
  • 12. REFERENCES • Genetargeting.com. (2018). The Benefits and Drawbacks of the Transgenic Mouse Model. [online] Available at: https://www.genetargeting.com/transgenic/transgenic-mouse-model/ [Accessed 22 Oct. 2018]. • genOway. (n.d.). Knockin Mouse Models. [online] Available at: https://www.genoway.com/services/customized- mouse/knockin-models/overview.htm [Accessed 21 Oct. 2018]. • Koch Institute for Integrative Cancer Research at MIT. (n.d.). Knockins and Knockouts. [online] Available at: https://ki.mit.edu/sbc/escell/models/knock [Accessed 19 Oct. 2018]. • McQueen, C. (2018). Comprehensive toxicology. 3rd ed. Oxford, UK: Elsevier, p.709. • Mirsaidi, N., Burns, M., McClain, S., Forsyth, E., Li, J., Dukes, B., Lin, D., Nahvi, R., Giraldo, J., Patton, M., Wang, P., Lin, K., Miller, E., Ratliff, T., Hamidi, S., Crist, S., Takemaru, K. and Szema, A. (2017). Enhanced Mortality to Metastatic Bladder Cancer Cell Line MB49 in Vasoactive Intestinal Peptide Gene Knockout Mice. Frontiers in Endocrinology, [online] 8, pp.1-6. Available at: <https://www.frontiersin.org/articles/10.3389/fendo.2017.00162/full> [Accessed 21 Oct. 2018]. • National Human Genome Research Institute. (2015). Knockout Mice. [online] Available at: https://www.genome.gov/12514551/knockout-mice-fact-sheet/ [Accessed 19 Oct. 2018]. • Samarasinghe, B. (2013). The Knockout Mouse. [online] Jargon Wall. Available at: https://www.jargonwall.com/molecular- biology/knockout-mouse/ [Accessed 21 Oct. 2018]. • Webprojects.oit.ncsu.edu. (2018). genome.gov | Knockout Mice. [online] Available at: http://webprojects.oit.ncsu.edu/project/bio183de/Black/genetech2/genetech2_news/knockouts.html [Accessed 22 Oct. 2018]. • Yang, B. (2018). Three scientists who invented gene knockout technology won Lasker Basic Medical Research Award. [online] Discoverymedicine.com. Available at: http://www.discoverymedicine.com/Benjamin-Yang/2009/05/10/three- scientists-who-invented-gene-knockout-technology-won-lasker-basic-medical-research-award/ [Accessed 22 Oct. 2018].