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1
Lecture- 6
Cosmids
Types of
cosmids:
Single cos
cosmids : pJB8
Dual cos cosmids :
c2XB, supercos -1,
pLFR - 5
Cosmid is a plasmid containing one or two copies of cos sites of
bacteriophage lambda. It is useful as a vector for gene cloning in
conjunction with a packaging system
The concatemers of cosmid molecules linked at their cos sites act as
substrate for in vitro packaging
The host containing cosmids do not form plaques but form colonies
Cosmids have high insert capacities i.e., 30 -45 kbp
2
Fig : Single cos
cosmids
Fig : Dual cos
cosmids
3
in vitro
packaging
system
Cloning strategies used with cosmid vectors
4
Another cloning strategy
for single cos site vector
5
Can be used as gene cloning vectors
Cosmids are high insert capacity vectors
Cosmids are used for the analysis of complex genomes
Large genes can be studied intact and genetic linkage
studies can be carried out at molecular level
Background molecules which do not have the insert DNA
or have the smaller inserts are eliminated during
packaging
Transformation frequency of cosmids is high
Advantages of cosmids
6
Phagemid vectors
Phagemid is a filamentous phage-derived vector
containing the replication origin of a plasmid
Properties
Small size
High genetic stability
Can be used to clone single and double stranded
DNA
7
Phagemid contains two origins of replication:
Plasmid s and phage's
Replicates like
plasmid producing
double-stranded
plasmid DNA which has
conventional properties
Replicates like M13
producing single
stranded DNA, packaged
and released in presence
of a helper phage
sequencing work can be done directly, without
sub-cloning from the plasmid to phage
This process is called
DNA rescue
8

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Lectut btn-202-ppt-l6. cosmids and phagemids

  • 2. Cosmids Types of cosmids: Single cos cosmids : pJB8 Dual cos cosmids : c2XB, supercos -1, pLFR - 5 Cosmid is a plasmid containing one or two copies of cos sites of bacteriophage lambda. It is useful as a vector for gene cloning in conjunction with a packaging system The concatemers of cosmid molecules linked at their cos sites act as substrate for in vitro packaging The host containing cosmids do not form plaques but form colonies Cosmids have high insert capacities i.e., 30 -45 kbp 2
  • 3. Fig : Single cos cosmids Fig : Dual cos cosmids 3
  • 4. in vitro packaging system Cloning strategies used with cosmid vectors 4
  • 5. Another cloning strategy for single cos site vector 5
  • 6. Can be used as gene cloning vectors Cosmids are high insert capacity vectors Cosmids are used for the analysis of complex genomes Large genes can be studied intact and genetic linkage studies can be carried out at molecular level Background molecules which do not have the insert DNA or have the smaller inserts are eliminated during packaging Transformation frequency of cosmids is high Advantages of cosmids 6
  • 7. Phagemid vectors Phagemid is a filamentous phage-derived vector containing the replication origin of a plasmid Properties Small size High genetic stability Can be used to clone single and double stranded DNA 7
  • 8. Phagemid contains two origins of replication: Plasmid s and phage's Replicates like plasmid producing double-stranded plasmid DNA which has conventional properties Replicates like M13 producing single stranded DNA, packaged and released in presence of a helper phage sequencing work can be done directly, without sub-cloning from the plasmid to phage This process is called DNA rescue 8