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11/6/2014 
1 
“You are what you eat !” 
Thursday, November 06, 2014 
1 
Rajesh Chaudhary 
LIPIDS 
Department of Biochemistry, KMC, Duwakot 
Thursday, November 06, 2014 
Rajesh Chaudhary 
2 
Biomedical importance and function 
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Rajesh Chaudhary 
3 
Phospholipids and Sterols are major structural elements of cell membrane. 
Role as enzyme cofactor. 
Electron carrier. 
Light-absorbing pigment. 
Hydrophobic-anchor for proteins. 
Emulsifying agent in digestive tract. 
Categories of biological lipids 
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Rajesh Chaudhary 
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Eight major categories of Biological lipids 
Lipids Vs. Fatty acids Vs. Triacylglycerol 
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Simplest lipid constructed from Fatty acids are Triacylglycerol, also referred to as TG, Fat or Neutral fat. 
How are ester link formed? 
Triacylglycerol (TG) 
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Examples of simple TG: Tripalmitin, Tristearin, Triolein. 
Types of Triacylglycerols 
Simple 
Complex
11/6/2014 
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Triacylglycerol (TG) 
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1. Triglycerides as storage form of energy in Eukaryotes and higher vertebrates 2. Role of Lipases 
Triacylglycerol (TG) 
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What is the advantage of having TG as a stored fuel rather than polysaccharide such as Glycogen and Starch? 
1. The carbon atom of fatty acid are more reduced than glycogen and starch, thus, gives more energy. 
(A gram for gram) 
2. TG are hydrophobic thus unhydrated. Therefore, organisms don’t have to carry extra weight of water. 
Classification of Lipids 
Thursday, November 06, 2014 
Rajesh Chaudhary 
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1. Simple lipids 
Examples: Fats and Waxes. 
2. Complex lipids 
Examples: Phospholipids (glycerophospholipids, sphingophospholipids) 
Glycolipids: glycosphingolipids 
3. Precursor and derived lipids 
Examples: fatty acid, glycerol, steroids, fatty aldehydes, ketone bodies. 
Simple lipids 
Complex lipids 
Classification of Lipids 
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Rajesh Chaudhary 
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Fatty acids are aliphatic carboxylic acid. 
Are either: 1. Saturated and 2. Unsaturated 
1. Saturated: doesn’t contain double bond 
2. Unsaturated: contains double bond 
2. Unsaturated 
2.1. Monounsaturated (E.g.: Oleic acid) 
2.2. Polyunsaturated (E.g.: polyethenoid, polyenoic acids) 
2.3. Eicosanoids (E.g.: Prostanoids, Lipoxin and Leukotrienes) 
Nomenclature 
Thursday, November 06, 2014 
Rajesh Chaudhary 
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Saturated acids ends in “-anoic” acid. 
Example: Octanoic acid 
Unsaturated acids with double bonds end in “-enoic” acid. 
Example: Octadecenoic acid 
Examples of saturated, monounsaturated and polyunsaturated fatty acids 
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Rajesh Chaudhary 
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Basic rules of nomenclature in Lipids 
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1. Carbon atoms are named from the carboxyl carbon. (Carbon No. 1) 
2. The rest of the carbon following are named as: 2,3,4… and so on – also known as “a”, “b”, “g” and so on…. 
3. For polyunsaturated fatty acids: The no. of carbon is named from the opposite side of the carboxyl carbon and given the no. (Carbon No. 1) – and called “omega (w)”. 
Delta (D) is used for indicating the position and number of double bonds. 
Nomenclature 
Thursday, November 06, 2014 
Rajesh Chaudhary 
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Fatty acids are hydrocarbon derivatives (Length: C4 to C36). 
Monounsaturated fatty acids 
Thursday, November 06, 2014 
Rajesh Chaudhary 
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… acids containing one double bond. 
Figure. Oleic acid. n-9 is equivalent to w9. 
Examples 
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Palmitic acid: abbreviated form  16:0 
Oleic acid: 18:1 
Most commonly occurring fatty acids have even no. of carbon chain  12 – 24. 
Common pattern of location of double bonds in Fatty acids 
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In most monounsaturated fatty acids, double bond is between C9 and C10. (D9) 
Other double bonds of polyunsaturated fatty acids (PUFA) are at D12 and D15. 
Exception: Arachidonic acid 
In most naturally occurring PUFA have cis-configuration. 
Trans-FA are produced by fermentation in rumen of ruminants. 
Key convention on Polyunsaturated Fatty Acids (PUFA) 
Thursday, November 06, 2014 
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Double bond between the 3rd. And 4th. Carbon atom from methyl end is of special importance in human nutrition. 
Alternative nomenclature is used for PUFA rather than conventional one. 
1. Carbon atom to the most distant site from the carboxylic terminal gets the name “w” – the carbon no. 1. 
Example: Omega-3 fatty acid.
11/6/2014 
4 
Key convention in PUFAS 
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Example: Omega-3 PUFA (a-linolenic acid) 
(ALA; 18:3(D9,12,15)) 
(EPA; 20:5(D5,8,11,14,17) 
(DHA; 22:6(D4,7,10,13,16,19) 
An imbalance in 푂푚푒푔푎−6 푓푎푡푡푦 푎푐푖푑 푂푚푒푔푎−3 푓푎푡푡푦 푎푐푖푑  Cardiovascular diseases 
Optimal ratio is 1:1 or 4:1, but North American diet contains 10:1 or 30:1. 
Geometric isomerism of D9, 18:1 fatty acids (Oleic and Elaidic acids) 
Thursday, November 06, 2014 
20 
Effect of temperature on structure of lipids (Higher Vs. Lower)? 
Presence of acyl chains on same side vs opposite side around carbon containing double bond 
Arachidonic acid 
Physical and Physiologic properties of Fatty acids 
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Rajesh Chaudhary 
21 
Melting point of even numbered carbon fatty acids increase with chain length and decrease according to unsaturation. 
Triacylglycerol containing three saturated fatty acids of 12 carbons or more Vs. if, fatty acid residues are 18:2 
Membrane lipids are liquid at room temperature. 
Structural Lipids in Membranes 
Thursday, November 06, 2014 
Rajesh Chaudhary 
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What are the structural lipids in membrane? 
1. Glycerophospholipids (2 fatty acids + glycerol) – hydrophobic region 
2. Galactolipids & Sulfolipids (2 fatty acids + 1 glycerol) but lacks Phosphate 
3. Archael tetraether lipids (2 acyl long chain + ether-linked to glycerol) 
4. Sphingolipids (1 fatty acids + fatty amine (Sphingosine)) 
5. Sterol 
Phospholipids Vs. Glycolipids 
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Rajesh Chaudhary 
23 
In Glycerophospolipids and some Sphingolipids, a polar head group is joined to hydrophobic moiety with phosphodiester linkage – these are called “Phospholipids”. 
But, some lacks “Phosphate” group an can be simple or complex – known as “Glycolipids”. 
Some common types of storage and membrane lipids 
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11/6/2014 
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Glycerophospholipids 
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… called “Phosphoglycerides”. 
2 fatty acids + 1st. And 2nd. Carbon of glycerol. 
Glycerol is Prochiral. 
No asymmetric carbon atom. 
Some glycerophospholipids have ether-linked fatty acids. 
Glycerophospholipids 
Thursday, November 06, 2014 
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26 
1 
2 
… released from leukocyte called “basophils” and stimulate platelet aggregation and release of serotonine (a vasoconstrictor) 
Sphingolipids 
Thursday, November 06, 2014 
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27 
… 4th. Large class of membrane lipids. 
… contains one polar head and two non-polar tail. 
Doesn’t contain “glycerol”. 
3 subclasses of Sphingolipids 
1. sphingomyelins 
2. neutral glycolipids 
3. and, gangliosides 
Sphingolipids 
Thursday, November 06, 2014 
Rajesh Chaudhary 
28 
Sphingolipids at cell surface are sites of biological recognition. 
Many of these are specially prominent in the plasma membranes of neurons. 
 Carbohydrate moieties of certain sphingolipids define the human blood groups. 
NOTE: Phospholipids and Sphingolipids are degraded in lysosomes. 
Sterols 
Thursday, November 06, 2014 
Rajesh Chaudhary 
29 
… structural lipids present in the membrane of most eukaryotic cells. 
Cholesterol is one major sterol. 
Phospholipids are the main lipid constituents of membranes 
Thursday, November 06, 2014 
Rajesh Chaudhary 
30 
… is derivative of Phosphatidic acid. 
1. Phosphatidylcholines (Lecithins)  in membranes. 
2. Phosphatidylinositol  Precursor of second messengers 
3. Cardiolipin  major lipid in mitochondrial membrane. 
4. Lysophospholipids  intermediate in metabolism of phosphoglycerols. 
5. Plasmalogens occur in brain & muscle. 
6. Sphingomyelins  in Nervous system

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Lipids

  • 1. 11/6/2014 1 “You are what you eat !” Thursday, November 06, 2014 1 Rajesh Chaudhary LIPIDS Department of Biochemistry, KMC, Duwakot Thursday, November 06, 2014 Rajesh Chaudhary 2 Biomedical importance and function Thursday, November 06, 2014 Rajesh Chaudhary 3 Phospholipids and Sterols are major structural elements of cell membrane. Role as enzyme cofactor. Electron carrier. Light-absorbing pigment. Hydrophobic-anchor for proteins. Emulsifying agent in digestive tract. Categories of biological lipids Thursday, November 06, 2014 Rajesh Chaudhary 4 Eight major categories of Biological lipids Lipids Vs. Fatty acids Vs. Triacylglycerol Thursday, November 06, 2014 Rajesh Chaudhary 5 Simplest lipid constructed from Fatty acids are Triacylglycerol, also referred to as TG, Fat or Neutral fat. How are ester link formed? Triacylglycerol (TG) Thursday, November 06, 2014 Rajesh Chaudhary 6 Examples of simple TG: Tripalmitin, Tristearin, Triolein. Types of Triacylglycerols Simple Complex
  • 2. 11/6/2014 2 Triacylglycerol (TG) Thursday, November 06, 2014 Rajesh Chaudhary 7 1. Triglycerides as storage form of energy in Eukaryotes and higher vertebrates 2. Role of Lipases Triacylglycerol (TG) Thursday, November 06, 2014 Rajesh Chaudhary 8 What is the advantage of having TG as a stored fuel rather than polysaccharide such as Glycogen and Starch? 1. The carbon atom of fatty acid are more reduced than glycogen and starch, thus, gives more energy. (A gram for gram) 2. TG are hydrophobic thus unhydrated. Therefore, organisms don’t have to carry extra weight of water. Classification of Lipids Thursday, November 06, 2014 Rajesh Chaudhary 9 1. Simple lipids Examples: Fats and Waxes. 2. Complex lipids Examples: Phospholipids (glycerophospholipids, sphingophospholipids) Glycolipids: glycosphingolipids 3. Precursor and derived lipids Examples: fatty acid, glycerol, steroids, fatty aldehydes, ketone bodies. Simple lipids Complex lipids Classification of Lipids Thursday, November 06, 2014 Rajesh Chaudhary 10 Fatty acids are aliphatic carboxylic acid. Are either: 1. Saturated and 2. Unsaturated 1. Saturated: doesn’t contain double bond 2. Unsaturated: contains double bond 2. Unsaturated 2.1. Monounsaturated (E.g.: Oleic acid) 2.2. Polyunsaturated (E.g.: polyethenoid, polyenoic acids) 2.3. Eicosanoids (E.g.: Prostanoids, Lipoxin and Leukotrienes) Nomenclature Thursday, November 06, 2014 Rajesh Chaudhary 11 Saturated acids ends in “-anoic” acid. Example: Octanoic acid Unsaturated acids with double bonds end in “-enoic” acid. Example: Octadecenoic acid Examples of saturated, monounsaturated and polyunsaturated fatty acids Thursday, November 06, 2014 Rajesh Chaudhary 12
  • 3. 11/6/2014 3 Basic rules of nomenclature in Lipids Thursday, November 06, 2014 Rajesh Chaudhary 13 1. Carbon atoms are named from the carboxyl carbon. (Carbon No. 1) 2. The rest of the carbon following are named as: 2,3,4… and so on – also known as “a”, “b”, “g” and so on…. 3. For polyunsaturated fatty acids: The no. of carbon is named from the opposite side of the carboxyl carbon and given the no. (Carbon No. 1) – and called “omega (w)”. Delta (D) is used for indicating the position and number of double bonds. Nomenclature Thursday, November 06, 2014 Rajesh Chaudhary 14 Fatty acids are hydrocarbon derivatives (Length: C4 to C36). Monounsaturated fatty acids Thursday, November 06, 2014 Rajesh Chaudhary 15 … acids containing one double bond. Figure. Oleic acid. n-9 is equivalent to w9. Examples Thursday, November 06, 2014 Rajesh Chaudhary 16 Palmitic acid: abbreviated form  16:0 Oleic acid: 18:1 Most commonly occurring fatty acids have even no. of carbon chain  12 – 24. Common pattern of location of double bonds in Fatty acids Thursday, November 06, 2014 Rajesh Chaudhary 17 In most monounsaturated fatty acids, double bond is between C9 and C10. (D9) Other double bonds of polyunsaturated fatty acids (PUFA) are at D12 and D15. Exception: Arachidonic acid In most naturally occurring PUFA have cis-configuration. Trans-FA are produced by fermentation in rumen of ruminants. Key convention on Polyunsaturated Fatty Acids (PUFA) Thursday, November 06, 2014 Rajesh Chaudhary 18 Double bond between the 3rd. And 4th. Carbon atom from methyl end is of special importance in human nutrition. Alternative nomenclature is used for PUFA rather than conventional one. 1. Carbon atom to the most distant site from the carboxylic terminal gets the name “w” – the carbon no. 1. Example: Omega-3 fatty acid.
  • 4. 11/6/2014 4 Key convention in PUFAS Thursday, November 06, 2014 Rajesh Chaudhary 19 Example: Omega-3 PUFA (a-linolenic acid) (ALA; 18:3(D9,12,15)) (EPA; 20:5(D5,8,11,14,17) (DHA; 22:6(D4,7,10,13,16,19) An imbalance in 푂푚푒푔푎−6 푓푎푡푡푦 푎푐푖푑 푂푚푒푔푎−3 푓푎푡푡푦 푎푐푖푑  Cardiovascular diseases Optimal ratio is 1:1 or 4:1, but North American diet contains 10:1 or 30:1. Geometric isomerism of D9, 18:1 fatty acids (Oleic and Elaidic acids) Thursday, November 06, 2014 20 Effect of temperature on structure of lipids (Higher Vs. Lower)? Presence of acyl chains on same side vs opposite side around carbon containing double bond Arachidonic acid Physical and Physiologic properties of Fatty acids Thursday, November 06, 2014 Rajesh Chaudhary 21 Melting point of even numbered carbon fatty acids increase with chain length and decrease according to unsaturation. Triacylglycerol containing three saturated fatty acids of 12 carbons or more Vs. if, fatty acid residues are 18:2 Membrane lipids are liquid at room temperature. Structural Lipids in Membranes Thursday, November 06, 2014 Rajesh Chaudhary 22 What are the structural lipids in membrane? 1. Glycerophospholipids (2 fatty acids + glycerol) – hydrophobic region 2. Galactolipids & Sulfolipids (2 fatty acids + 1 glycerol) but lacks Phosphate 3. Archael tetraether lipids (2 acyl long chain + ether-linked to glycerol) 4. Sphingolipids (1 fatty acids + fatty amine (Sphingosine)) 5. Sterol Phospholipids Vs. Glycolipids Thursday, November 06, 2014 Rajesh Chaudhary 23 In Glycerophospolipids and some Sphingolipids, a polar head group is joined to hydrophobic moiety with phosphodiester linkage – these are called “Phospholipids”. But, some lacks “Phosphate” group an can be simple or complex – known as “Glycolipids”. Some common types of storage and membrane lipids Thursday, November 06, 2014 Rajesh Chaudhary 24
  • 5. 11/6/2014 5 Glycerophospholipids Thursday, November 06, 2014 Rajesh Chaudhary 25 … called “Phosphoglycerides”. 2 fatty acids + 1st. And 2nd. Carbon of glycerol. Glycerol is Prochiral. No asymmetric carbon atom. Some glycerophospholipids have ether-linked fatty acids. Glycerophospholipids Thursday, November 06, 2014 Rajesh Chaudhary 26 1 2 … released from leukocyte called “basophils” and stimulate platelet aggregation and release of serotonine (a vasoconstrictor) Sphingolipids Thursday, November 06, 2014 Rajesh Chaudhary 27 … 4th. Large class of membrane lipids. … contains one polar head and two non-polar tail. Doesn’t contain “glycerol”. 3 subclasses of Sphingolipids 1. sphingomyelins 2. neutral glycolipids 3. and, gangliosides Sphingolipids Thursday, November 06, 2014 Rajesh Chaudhary 28 Sphingolipids at cell surface are sites of biological recognition. Many of these are specially prominent in the plasma membranes of neurons.  Carbohydrate moieties of certain sphingolipids define the human blood groups. NOTE: Phospholipids and Sphingolipids are degraded in lysosomes. Sterols Thursday, November 06, 2014 Rajesh Chaudhary 29 … structural lipids present in the membrane of most eukaryotic cells. Cholesterol is one major sterol. Phospholipids are the main lipid constituents of membranes Thursday, November 06, 2014 Rajesh Chaudhary 30 … is derivative of Phosphatidic acid. 1. Phosphatidylcholines (Lecithins)  in membranes. 2. Phosphatidylinositol  Precursor of second messengers 3. Cardiolipin  major lipid in mitochondrial membrane. 4. Lysophospholipids  intermediate in metabolism of phosphoglycerols. 5. Plasmalogens occur in brain & muscle. 6. Sphingomyelins  in Nervous system