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GENE THERAPY
Presenter
Dr Chunu Darnal
Resident, ORL&HNS
Bir Hospital, NAMS
Kathmandu, Nepal
Introduction
Gene :
 Term- Danish botanist
and geneticist Wilhelm
Johannsen(1909)
 Greek, gonos: offspring and
procreation
 A sequence
of nucleotides in DNA or RNA
that encodes the synthesis of
a gene product, either RNA
or protein
 Majority of organisms encode
their genes in long strands
of DNA
Introduction
Genome:
 Total complement of genes in
an organism or cell stored on
one or more chromosomes
 A chromosome consists of a
single, very long DNA helix on
which thousands of genes are
encoded
 The region of a particular
gene in its location is
its locus
Gene expression
1. Transcription
2. RNA processing
and transfer
3. Translation
Gene expression varies depending on the cell’s function which
results in multiple cell and tissues phenotypes constituting
human body.
Cell division
 Disorder in cell division-
cell death or proliferation
Phases
 G1: enzymes, nucleic
acids
 S: DNA
replication/synthesis
 G2: cell growth and
duplication
 M: replication
 G0: resting state
Introduction :Gene therapy
Vectors
Host cells
target
Exogenous
genetic
material
Gene therapy
Principle
 Can be restorative,
regenerative or
protective in nature
 Works by replacing ,
suppressing /
enhancing gene
expression
Gene therapy :replacement
 Replace the defective genes with normal gene
 Targets in rare inherited diseases
 Applicability in treatment of inherited disease
 Examples :
 Functioning Adenosine deaminase replacement in
SCID have effectively reconstituted immune
system
 Factor IX gene in Hemophilia B
 CFTR gene in cystic fibrosis
Gene therapy in SCID
Gene therapy :enhancement
 Can be effective in common acquired diseases- cancers,
arthritis and atherosclerosis
 Example : Clinical trial was done for melanoma
 Tumor infiltrating cells after surgery, purified, grown and TNF
introduced into the cells
 Genetically engineered cells transfused to the patient ,
migrates to the residual tumor site delivering the therapeutic
dose of TNF.
Gene therapy: supression
 Suppressing key genes
 Examples:
 RET, protooncogen responsible for medullary carcinoma
thyroid can be suppressed by mutant RET gene
 New technique (Nobel prize 2006) : RNA interference(RNAi),
genes are selectively silenced
 Off targets effects; but unclear
 Human trials on macular degeneration and
neurodegenerative diseases
Gene therapy
Disorders under evaluation
 Infectious disease trials :HIV
 Monogenetic diseases: cystic fibrosis , Hemophilia
B
 Polygenetic diseases: rheumatoid arthritis, cancer
Gene therapy
 In a study : 10 year follow up of SCID subjects out of 20,
 18 are still alive including 4 with leukemia and 17 who have
their immunodeficiency corrected
Gene therapy: somatic versus
germ cell gene therapy
Somatic gene
therapy
 Somatic cells
constituting organs and
postnatal tissues of body
 Bone marrow, liver,
tumor cells, muscle,
skin, endothelium,
thyroid
 Doesn’t alter the
inherited genetic
material
Somatic gene therapy
Gene therapy : somatic versus
germ cell therapy
Germ cell therapy
 Targets germ cells or those that produce sperm
and ovum
 Passed onto a person’s offsprings
 Genetic manipulation can alter the genetic
constitution of offspring
 Could prevent the inherited diseases
Permanent versus temporary
gene therapy
Permanent gene therapy
 Requires indefinite
enhancement or blockage
of target gene
 Organ resection, cellular
transplantation, growth
hormone deficiency,
juvenile diabetes
 Short term efficacy and
long term safety
Temporary gene therapy
 Temporary gene regulation
 Cancer, cystic fibrosis,
arthritis
 Selected beneficial effect
over a limited period of
time
 Example in cancer; directly
toxic to cancer cells or
cytokines that initiate
antitumor immune
response.
Methods of delivering gene
therapy
1.Direct injection of genetic
material
 DNA mediated transfer of
therapeutic genes
 Direct delivery of RNA for
gene silencing
2. Viral mediated gene
transfer
 Retroviruses
 Adenoviruses
 Adeno associated virus
3. Non- viral vector mediated
gene transfer
Viral mediated gene transfer
Strategies for administering gene
therapy
1. Ex vivo gene
therapy
2. In vivo gene
therapy
Viral vectors
Cystic fibrosis (CF)
 Single mutation and autosomal recessive
inheritance
 Mutation involving CF gene in long arm of
chromosome 7
 CF gene encodes a protein- cystic fibrosis
transmembrane conductance regulator(CFTR
protein)
 Commonest lethal genetic disorder involving the
wealthiest racial groups, so research funding never
a problem
Gene therapy model for cystic
fibrosis
 Nasal model
 Pulmonary model
Nasal model of gene therapy
 Promising in cystic fibrosis
 Nasal manifestations
 Gene administration by virus vectors safer via nasal
cavity
 Nasal and sinus mucosa have fairly large surface area,
adequate for absorption of the vector
 Adenovirus commonly used, has propensity to adsorb
to nasal mucosa
 Treatment assured by measuring potential difference
across the nasal mucosa and easy to perform
Nasal model of gene therapy for
CF
Pulmonary model of gene
therapy
 Life threatening complication of cystic fibrosis due
to effect on lungs
 Adenovirus easily adheres to the alveolar mucosa
 Has deleterious effects on the lung tissue causing
death, thus cautions to be made while using the
model
Adenovirus vectors
 Have a tropism for respiratory mucosa
 Recombinant virus is prepared by replacing DNA sequence
responsible for replication of virus with that of DNA sequence
responsible for secretion of CFTR protein deficient in CF
patients
 Human respiratory mucosa has sufficient immunity to prevent
adenovirus infections , hence administration via pulmonary
route may not be effective
 Nasal route ideally suited in cystic fibrosis.
Gene therapy: Adenovirus
vector
Adenovirus gene therapy; role of
calcium chelators
 Vectors are aimed at
epithelial surfaces
 In pulmonary epithelium,
viral receptors are located
in basolateral membrane
away from the surface
 Use of calcium chelators
will cause transient
disruption of tight epithelial
junctions allowing vector
access to the basolateral
membrane
Adeno associated virus
 Serotypes 5 and 6 enters airway cells from the apical surface
 Least toxicity and minimal immuno-reaction
 Potential integration into host genome
 Direct administration into maxillary sinuses attempted, has
reasonable success and do not cause sinusitis
 Measurement of maxillary sinus voltage helps in
determination of therapeutic end point
Lentivirus
 Feline immunodeficiency
virus
 Can integrate and persist in
the host genome
 Can transduce into non
dividing cells
 Helpful in the pulmonary
mucosa whose turnover is
rather low
Non viral vectors
 Purified /naked DNA in
plasmid form
 Gene gun/ballistic delivery
system-on exposed
surfaces
 Liposomes : DNA coated
liposomes gets
incorporated into the cell by
endocytosis or fusion
 Non immunogenic
 Gene transfer inefficient
Gene therapy in head and neck
cancer
 Increased appreciation of biological basis of oncogenesis
 Understanding of gene targets to potentially correct by either
replacement or blockage of the effect of mutated gene
 Therapy strategies:
 Immune modulation
 Restorative gene replacement
 Selective oncolysis
 chemosensitization
Ideal gene therapy system
 To achieve expression of gene of interest in the targeted
cancer cell
 Malignant cells need to be targeted
 Binding and internalisation of genes by the targeted cells
 Gene should escape the endosomal degradation and reach
the nucleus
 Nuclear expression-once inside the nucleus the quantity of
gene expression should be adequate and stable
Chemosensitization
 Selective sensitization of cancer cells to chemo/radiotherapy
 Ideal way to kill cancer cells
 Target only malignant cells
 Herpes simplex thymidine kinase can be delivered to cancer
cells making them more susceptible to Gancyclovir
Chemosensitization
 Bystander effect ensures that the cancer cells spread these
genes into cells surrounding them via cell to cell contact
 Transfer of p53 gene sensitizes the cancer cell to undergo
apoptosis following chemo/radiotherapy
Immune modulation
 Immune dysfunction at the site of tumor causes malignant
cells to thrive
 Immunological ignorance/down regulation of major
histocompatibility complexes contributes for the modulation
 Over expression of down regulated cytokines, proven to be
toxic due to capillary leak syndrome
Restorative gene therapy
 Mutations of p53 and p16 genes are common in squamous
cell carcinoma of head and neck thus restoration of these
genes could enhance apoptosis of tumor cells
 Can inactivate proto-oncogene production
 Repair of deranged apoptotic pathway in tumor cells could
help in controlling malignancy
Selective oncolytic viruses
 Infection with wild type adenovirus can cause excessive
replication of the viruses leading on to cell death
 If these viruses could be harnessed to replicate inside cancer
cells alone then preferential targeted destruction of tumor
cells can occur
 ONYX-015, adenovirus replicate inside cancer cells that lack
functional p53 gene
 If administered intravenously can take care of distant
metastasis.
Gene therapy in head and neck
cancer
 TP53, most commonly mutated
tumor suppressor gene, has been
the focus of some prior
investigations into gene therapy in
HNSCC.
 In China, recombinant p53
protein delivered via an adenoviral
vector (Gendicine) is in phase II/III
clinical trials (Liu et al., 2013) as
an adjuvant therapy to standard of
care (surgery, chemotherapy and
radiation).
 In the United States,
investigations of same remain in
early clinical phases (Yoo et al.,
2009).
Investigation into restoration of other tumor
suppressor genes in HNSCC is lacking.
Newer field for gene therapy
1. Plastic and reconstructive surgery
 Reconstructive tissue flaps and wound healing
 Repair and regeneration of irradiated tissues
2. Laryngology
3. Otology and neurotology (adenoviruses and
herpesvirus derived vectors)
Gene therapy treating hearing
loss
Newer field for gene therapy
Columbia University, Department of Otolaryngology,
Head and Neck Surgery
Why GENE therapy ?
 New therapeutic approach
 Site-specific gene expression
 Improved efficacy and safety
 Improved routes of administration and compliance
 Preventive medicine and a reduction in health care costs
 References
1. Scott brown’s Otorhinolaryngology Head and Neck Surgery volume 1, 8th
edition
2. Scott brown’s Otorhinolaryngology Head and Neck Surgery volume 1, 7th
edition
3. Cummings otolaryngology volume 2, 6th edition
4. The potential for tumor suppressor gene therapy in head and neck cancer
Birkeland AC1, Ludwig ML1 , Spector ME1, Brenner JC1.
5. A Study of the Gene Therapy CGF166 in Patients with Severe-to-Profound
Hearing Loss, Columbia University, Department of Otorhinolaryngology
Head and Neck Surgery.
THANK YOU

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Gene therapy

  • 1. GENE THERAPY Presenter Dr Chunu Darnal Resident, ORL&HNS Bir Hospital, NAMS Kathmandu, Nepal
  • 2. Introduction Gene :  Term- Danish botanist and geneticist Wilhelm Johannsen(1909)  Greek, gonos: offspring and procreation  A sequence of nucleotides in DNA or RNA that encodes the synthesis of a gene product, either RNA or protein  Majority of organisms encode their genes in long strands of DNA
  • 3. Introduction Genome:  Total complement of genes in an organism or cell stored on one or more chromosomes  A chromosome consists of a single, very long DNA helix on which thousands of genes are encoded  The region of a particular gene in its location is its locus
  • 4. Gene expression 1. Transcription 2. RNA processing and transfer 3. Translation Gene expression varies depending on the cell’s function which results in multiple cell and tissues phenotypes constituting human body.
  • 5. Cell division  Disorder in cell division- cell death or proliferation Phases  G1: enzymes, nucleic acids  S: DNA replication/synthesis  G2: cell growth and duplication  M: replication  G0: resting state
  • 6. Introduction :Gene therapy Vectors Host cells target Exogenous genetic material
  • 7. Gene therapy Principle  Can be restorative, regenerative or protective in nature  Works by replacing , suppressing / enhancing gene expression
  • 8. Gene therapy :replacement  Replace the defective genes with normal gene  Targets in rare inherited diseases  Applicability in treatment of inherited disease  Examples :  Functioning Adenosine deaminase replacement in SCID have effectively reconstituted immune system  Factor IX gene in Hemophilia B  CFTR gene in cystic fibrosis
  • 10. Gene therapy :enhancement  Can be effective in common acquired diseases- cancers, arthritis and atherosclerosis  Example : Clinical trial was done for melanoma  Tumor infiltrating cells after surgery, purified, grown and TNF introduced into the cells  Genetically engineered cells transfused to the patient , migrates to the residual tumor site delivering the therapeutic dose of TNF.
  • 11. Gene therapy: supression  Suppressing key genes  Examples:  RET, protooncogen responsible for medullary carcinoma thyroid can be suppressed by mutant RET gene  New technique (Nobel prize 2006) : RNA interference(RNAi), genes are selectively silenced  Off targets effects; but unclear  Human trials on macular degeneration and neurodegenerative diseases
  • 12. Gene therapy Disorders under evaluation  Infectious disease trials :HIV  Monogenetic diseases: cystic fibrosis , Hemophilia B  Polygenetic diseases: rheumatoid arthritis, cancer
  • 13. Gene therapy  In a study : 10 year follow up of SCID subjects out of 20,  18 are still alive including 4 with leukemia and 17 who have their immunodeficiency corrected
  • 14. Gene therapy: somatic versus germ cell gene therapy Somatic gene therapy  Somatic cells constituting organs and postnatal tissues of body  Bone marrow, liver, tumor cells, muscle, skin, endothelium, thyroid  Doesn’t alter the inherited genetic material
  • 16. Gene therapy : somatic versus germ cell therapy Germ cell therapy  Targets germ cells or those that produce sperm and ovum  Passed onto a person’s offsprings  Genetic manipulation can alter the genetic constitution of offspring  Could prevent the inherited diseases
  • 17. Permanent versus temporary gene therapy Permanent gene therapy  Requires indefinite enhancement or blockage of target gene  Organ resection, cellular transplantation, growth hormone deficiency, juvenile diabetes  Short term efficacy and long term safety Temporary gene therapy  Temporary gene regulation  Cancer, cystic fibrosis, arthritis  Selected beneficial effect over a limited period of time  Example in cancer; directly toxic to cancer cells or cytokines that initiate antitumor immune response.
  • 18. Methods of delivering gene therapy 1.Direct injection of genetic material  DNA mediated transfer of therapeutic genes  Direct delivery of RNA for gene silencing 2. Viral mediated gene transfer  Retroviruses  Adenoviruses  Adeno associated virus 3. Non- viral vector mediated gene transfer
  • 20. Strategies for administering gene therapy 1. Ex vivo gene therapy 2. In vivo gene therapy
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  • 24. Cystic fibrosis (CF)  Single mutation and autosomal recessive inheritance  Mutation involving CF gene in long arm of chromosome 7  CF gene encodes a protein- cystic fibrosis transmembrane conductance regulator(CFTR protein)  Commonest lethal genetic disorder involving the wealthiest racial groups, so research funding never a problem
  • 25. Gene therapy model for cystic fibrosis  Nasal model  Pulmonary model
  • 26. Nasal model of gene therapy  Promising in cystic fibrosis  Nasal manifestations  Gene administration by virus vectors safer via nasal cavity  Nasal and sinus mucosa have fairly large surface area, adequate for absorption of the vector  Adenovirus commonly used, has propensity to adsorb to nasal mucosa  Treatment assured by measuring potential difference across the nasal mucosa and easy to perform
  • 27. Nasal model of gene therapy for CF
  • 28. Pulmonary model of gene therapy  Life threatening complication of cystic fibrosis due to effect on lungs  Adenovirus easily adheres to the alveolar mucosa  Has deleterious effects on the lung tissue causing death, thus cautions to be made while using the model
  • 29. Adenovirus vectors  Have a tropism for respiratory mucosa  Recombinant virus is prepared by replacing DNA sequence responsible for replication of virus with that of DNA sequence responsible for secretion of CFTR protein deficient in CF patients  Human respiratory mucosa has sufficient immunity to prevent adenovirus infections , hence administration via pulmonary route may not be effective  Nasal route ideally suited in cystic fibrosis.
  • 31. Adenovirus gene therapy; role of calcium chelators  Vectors are aimed at epithelial surfaces  In pulmonary epithelium, viral receptors are located in basolateral membrane away from the surface  Use of calcium chelators will cause transient disruption of tight epithelial junctions allowing vector access to the basolateral membrane
  • 32. Adeno associated virus  Serotypes 5 and 6 enters airway cells from the apical surface  Least toxicity and minimal immuno-reaction  Potential integration into host genome  Direct administration into maxillary sinuses attempted, has reasonable success and do not cause sinusitis  Measurement of maxillary sinus voltage helps in determination of therapeutic end point
  • 33. Lentivirus  Feline immunodeficiency virus  Can integrate and persist in the host genome  Can transduce into non dividing cells  Helpful in the pulmonary mucosa whose turnover is rather low
  • 34. Non viral vectors  Purified /naked DNA in plasmid form  Gene gun/ballistic delivery system-on exposed surfaces  Liposomes : DNA coated liposomes gets incorporated into the cell by endocytosis or fusion  Non immunogenic  Gene transfer inefficient
  • 35. Gene therapy in head and neck cancer  Increased appreciation of biological basis of oncogenesis  Understanding of gene targets to potentially correct by either replacement or blockage of the effect of mutated gene  Therapy strategies:  Immune modulation  Restorative gene replacement  Selective oncolysis  chemosensitization
  • 36. Ideal gene therapy system  To achieve expression of gene of interest in the targeted cancer cell  Malignant cells need to be targeted  Binding and internalisation of genes by the targeted cells  Gene should escape the endosomal degradation and reach the nucleus  Nuclear expression-once inside the nucleus the quantity of gene expression should be adequate and stable
  • 37. Chemosensitization  Selective sensitization of cancer cells to chemo/radiotherapy  Ideal way to kill cancer cells  Target only malignant cells  Herpes simplex thymidine kinase can be delivered to cancer cells making them more susceptible to Gancyclovir
  • 38. Chemosensitization  Bystander effect ensures that the cancer cells spread these genes into cells surrounding them via cell to cell contact  Transfer of p53 gene sensitizes the cancer cell to undergo apoptosis following chemo/radiotherapy
  • 39. Immune modulation  Immune dysfunction at the site of tumor causes malignant cells to thrive  Immunological ignorance/down regulation of major histocompatibility complexes contributes for the modulation  Over expression of down regulated cytokines, proven to be toxic due to capillary leak syndrome
  • 40. Restorative gene therapy  Mutations of p53 and p16 genes are common in squamous cell carcinoma of head and neck thus restoration of these genes could enhance apoptosis of tumor cells  Can inactivate proto-oncogene production  Repair of deranged apoptotic pathway in tumor cells could help in controlling malignancy
  • 41. Selective oncolytic viruses  Infection with wild type adenovirus can cause excessive replication of the viruses leading on to cell death  If these viruses could be harnessed to replicate inside cancer cells alone then preferential targeted destruction of tumor cells can occur  ONYX-015, adenovirus replicate inside cancer cells that lack functional p53 gene  If administered intravenously can take care of distant metastasis.
  • 42. Gene therapy in head and neck cancer  TP53, most commonly mutated tumor suppressor gene, has been the focus of some prior investigations into gene therapy in HNSCC.  In China, recombinant p53 protein delivered via an adenoviral vector (Gendicine) is in phase II/III clinical trials (Liu et al., 2013) as an adjuvant therapy to standard of care (surgery, chemotherapy and radiation).  In the United States, investigations of same remain in early clinical phases (Yoo et al., 2009). Investigation into restoration of other tumor suppressor genes in HNSCC is lacking.
  • 43. Newer field for gene therapy 1. Plastic and reconstructive surgery  Reconstructive tissue flaps and wound healing  Repair and regeneration of irradiated tissues 2. Laryngology 3. Otology and neurotology (adenoviruses and herpesvirus derived vectors)
  • 44. Gene therapy treating hearing loss
  • 45. Newer field for gene therapy Columbia University, Department of Otolaryngology, Head and Neck Surgery
  • 46. Why GENE therapy ?  New therapeutic approach  Site-specific gene expression  Improved efficacy and safety  Improved routes of administration and compliance  Preventive medicine and a reduction in health care costs
  • 47.  References 1. Scott brown’s Otorhinolaryngology Head and Neck Surgery volume 1, 8th edition 2. Scott brown’s Otorhinolaryngology Head and Neck Surgery volume 1, 7th edition 3. Cummings otolaryngology volume 2, 6th edition 4. The potential for tumor suppressor gene therapy in head and neck cancer Birkeland AC1, Ludwig ML1 , Spector ME1, Brenner JC1. 5. A Study of the Gene Therapy CGF166 in Patients with Severe-to-Profound Hearing Loss, Columbia University, Department of Otorhinolaryngology Head and Neck Surgery.

Editor's Notes

  1. The TP53 gene provides instructions for making a protein called tumor protein p53 (or p53).