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Topic 
4, 
Eukaryotes
Organelles 
• Note: 
Both 
mitochondira 
and 
chloroplasts 
are 
semi-­‐ 
autonomous 
– each 
has 
their 
own 
DNA, 
ribosomes, 
and 
transcripAon 
machinery 
– can 
replicate 
independently 
of 
the 
rest 
of 
the 
cell 
– most 
of 
their 
proteins 
originate 
from 
the 
DNA 
in 
the 
nucleus 
of 
the 
cell
Plasma 
and 
Cell 
wall 
across 
Eukarya
Cytoskeleton 
and 
Flagella
Four 
Main 
Categories 
of 
Eukaryal 
Microbes 
Note: highly conserved genes can be used to enhance our understanding of eukaryal 
phylogeny (e.g. tubulins, heat shock proteins)"
Fungi 
-­‐-­‐ 
Saccharomyces 
cerevisiae 
• heterotrophic; 
cell 
walls 
of 
chiAn; 
used 
to 
make 
bread, 
beer, 
wine! 
• easy, 
cheap 
tool 
to 
study 
eukaryoAc 
structures/gene 
expression 
• Saccharomyces 
can 
undergo 
meiosis 
to 
form 
an 
ascus 
• Haploid 
maAng 
types 
can 
fuse 
to 
reproduce 
sexually 
or 
be 
maintained 
by 
asexual 
mitosis 
• 
Saccharomyces 
not 
limited 
to 
ascus 
formaAo 
• budding 
off 
of 
smaller 
cells 
can 
occur 
or 
fission 
of 
idenAcally 
sized 
cells
Protozoa 
• As 
a 
whole, 
a 
(very) 
broad 
category 
• Some 
heterotrophic, 
some 
photosyntheAc 
• Variable 
cell 
walls 
• Different 
moAlity 
strategies 
• Different 
reproducAon 
strategies 
• Model 
Organism 
= 
Giardia 
lamblia 
– geneAcally 
“old”, 
lacks 
mitochondria 
– causes 
human 
disease
Slime 
Moulds 
-­‐-­‐ 
Dictyostelium 
discoideum 
• sAll 
protozoan 
• model 
for 
studying 
ecology, 
cell 
moAlity, 
and 
cell-­‐cell 
communicaAon 
• Has 
three 
types 
of 
cycles: 
– VegetaAve 
cycle: 
exists 
in 
a 
haploid 
unicellular 
form 
unAl 
condiAons 
worsen 
then 
will 
go 
to 
social 
cycle. 
– Social 
Cycle: 
mulAcellular 
“slug” 
is 
formed 
with 
a 
stalk 
and 
a 
fruiAng 
bodyspores 
form 
in 
the 
fruiAng 
body, 
restarAng 
the 
life 
cycle 
as 
haploid 
cells 
– Sexual 
Cycle: 
• haploid 
cells 
can 
fuse 
into 
a 
diploid 
macrocyst 
form 
• macrocyst 
form 
undergoes 
meiosis 
to 
generate 
more 
haploid 
cells
Algae 
-­‐-­‐ 
Chlamydomonas 
• Many 
mulicellular 
with 
cellulose 
cell 
walls 
• has 
a 
two-­‐flagella 
form 
good 
for 
studying 
eukaryal 
flagella 
biogenesis/funcAon 
• durable 
and 
easy 
to 
grow 
• Chlamydomonas 
maintains 
a 
moAle 
haploidstate 
• haploid 
cells 
dierenAate 
and 
fuse 
into 
a 
diploid 
form 
in 
bad 
condiAons– 
spore 
formaAon
EndosymbioAc 
Theory 
• one 
primiAve 
microbe 
ingested 
another, 
forming 
a 
symbiosis 
• two 
endosymbioAc 
events 
must 
have 
occurred: 
– Mitochondria 
– Chloroplasts 
• Evidence 
for 
EndosymbioAc 
Theory: 
– mitochondria/chloroplasts 
resemble 
bacteria 
in 
both 
size 
and 
shape. 
• 
double 
membranes 
• “Cell” 
division 
with 
FtsZ 
• each 
has 
its 
own 
DNA, 
rRNA 
more 
similar 
tobacterial 
sequences 
than 
eukaryal 
ones 
• circular 
chromosome 
– EXCEPTION: 
Amitochondriates 
lack 
mitochondria. 
Cells 
likely 
evolved 
out 
of 
using 
them 
to 
obtain 
energy. 
Ex) 
Giardia
Diseases 
Caused 
by 
Eukaryal 
Microbes 
• Protozoa: 
– The 
tricky 
things 
about 
these 
pathogens 
is 
that 
they 
are 
very 
similar 
to 
the 
cells 
that 
they 
are 
taking 
over 
so, 
tough 
to 
harm 
it 
w/out 
harming 
human. 
Includes: 
• Malaria 
and 
African 
Sleeping 
Sickness 
• Fungi: 
– are 
less 
likely 
to 
cause 
disease, 
but 
can 
do 
so 
in 
immuno-­‐compromised 
individuals 
– Includes: 
• Candida 
albicans, 
causes 
oral 
thrush 
• Epidermophyton 
floccosum, 
causes 
Athlete’s 
foot 
• Protozoa 
and 
fungi 
can 
cause 
significant 
disease 
in 
plants 
but, 
must 
wait 
for 
the 
cell 
wall 
to 
become 
damaged 
– Fungi: 
• RHYTISMA 
-­‐ 
"tar 
spot" 
these 
are 
the 
infecAons 
on 
the 
maple 
trees. 
Means 
low 
air 
polluAon. 
• Phytophthora 
infestans 
-­‐ 
potato 
blight 
– Protozoa: 
• CORDYCEPS 
-­‐ 
are 
specific 
to 
each 
arthropod. 
Cause 
them 
to 
go 
mad 
and 
then 
form 
a 
fruiAng 
body 
out 
of 
their 
bodies.
Beneficial 
Roles 
of 
Eukaryal 
Microbes 
• primary 
producers 
provide 
energy 
• some 
algae 
produce 
great 
amounts 
of 
oxygen 
through 
photosynthesis 
in 
the 
oceans 
• biodegraders 
recycle 
nutrients 
• some 
eukaryal 
microbes 
can 
degrade 
cellulose, 
recycling 
plant 
macer 
becer 
than 
animals 
can

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Topic 4 review

  • 2. Organelles • Note: Both mitochondira and chloroplasts are semi-­‐ autonomous – each has their own DNA, ribosomes, and transcripAon machinery – can replicate independently of the rest of the cell – most of their proteins originate from the DNA in the nucleus of the cell
  • 3. Plasma and Cell wall across Eukarya
  • 5. Four Main Categories of Eukaryal Microbes Note: highly conserved genes can be used to enhance our understanding of eukaryal phylogeny (e.g. tubulins, heat shock proteins)"
  • 6. Fungi -­‐-­‐ Saccharomyces cerevisiae • heterotrophic; cell walls of chiAn; used to make bread, beer, wine! • easy, cheap tool to study eukaryoAc structures/gene expression • Saccharomyces can undergo meiosis to form an ascus • Haploid maAng types can fuse to reproduce sexually or be maintained by asexual mitosis • Saccharomyces not limited to ascus formaAo • budding off of smaller cells can occur or fission of idenAcally sized cells
  • 7. Protozoa • As a whole, a (very) broad category • Some heterotrophic, some photosyntheAc • Variable cell walls • Different moAlity strategies • Different reproducAon strategies • Model Organism = Giardia lamblia – geneAcally “old”, lacks mitochondria – causes human disease
  • 8. Slime Moulds -­‐-­‐ Dictyostelium discoideum • sAll protozoan • model for studying ecology, cell moAlity, and cell-­‐cell communicaAon • Has three types of cycles: – VegetaAve cycle: exists in a haploid unicellular form unAl condiAons worsen then will go to social cycle. – Social Cycle: mulAcellular “slug” is formed with a stalk and a fruiAng bodyspores form in the fruiAng body, restarAng the life cycle as haploid cells – Sexual Cycle: • haploid cells can fuse into a diploid macrocyst form • macrocyst form undergoes meiosis to generate more haploid cells
  • 9. Algae -­‐-­‐ Chlamydomonas • Many mulicellular with cellulose cell walls • has a two-­‐flagella form good for studying eukaryal flagella biogenesis/funcAon • durable and easy to grow • Chlamydomonas maintains a moAle haploidstate • haploid cells dierenAate and fuse into a diploid form in bad condiAons– spore formaAon
  • 10. EndosymbioAc Theory • one primiAve microbe ingested another, forming a symbiosis • two endosymbioAc events must have occurred: – Mitochondria – Chloroplasts • Evidence for EndosymbioAc Theory: – mitochondria/chloroplasts resemble bacteria in both size and shape. • double membranes • “Cell” division with FtsZ • each has its own DNA, rRNA more similar tobacterial sequences than eukaryal ones • circular chromosome – EXCEPTION: Amitochondriates lack mitochondria. Cells likely evolved out of using them to obtain energy. Ex) Giardia
  • 11. Diseases Caused by Eukaryal Microbes • Protozoa: – The tricky things about these pathogens is that they are very similar to the cells that they are taking over so, tough to harm it w/out harming human. Includes: • Malaria and African Sleeping Sickness • Fungi: – are less likely to cause disease, but can do so in immuno-­‐compromised individuals – Includes: • Candida albicans, causes oral thrush • Epidermophyton floccosum, causes Athlete’s foot • Protozoa and fungi can cause significant disease in plants but, must wait for the cell wall to become damaged – Fungi: • RHYTISMA -­‐ "tar spot" these are the infecAons on the maple trees. Means low air polluAon. • Phytophthora infestans -­‐ potato blight – Protozoa: • CORDYCEPS -­‐ are specific to each arthropod. Cause them to go mad and then form a fruiAng body out of their bodies.
  • 12. Beneficial Roles of Eukaryal Microbes • primary producers provide energy • some algae produce great amounts of oxygen through photosynthesis in the oceans • biodegraders recycle nutrients • some eukaryal microbes can degrade cellulose, recycling plant macer becer than animals can