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Trial Designs
Protocol Writing
2
Research is to see what
everybody else has seen, and to
think what nobody else has
thought.
Albert Szent-Gyorgyi
Definitions of Research
Research Designs
Observational Studies
Where the exposure or assignment of subjects into
a treated or control groups is beyond the scope of
the investigator.
Interventional Study
Where exposure and allotment of subjects into
treated and control groups is controlled by the
investigator.
2/11/2020 3
4
Where to Start?
 A good clinical study starts with
 a good question based on good hypothesis that is based on
good and comprehensive review of the available evidence
from pre-clinical and clinical data
 Type of design depends on the question to be
answered
5
Formulating a Research Question
 Focused and specific
 What is the prevalence of Hepatitis B surface
Antigen in India?
Cross-sectional study
 What are the risk factors for hepatitis B infection?
Prospective cohort or case-control
 Is interferon a useful therapy for hepatitis B
infection?
Therapeutic clinical trial
6
Objectives
 Specific aims
 Clear and detailed
 End point(s)
 Primary
 The main answer to the research question
 Secondary
 Answer other related questions
7
Observational study  Clinical trial
exposed
non exposed
outcome
Clinical
Trial
observational
studydescribe as
occurring in nature
allocate
randomly
Ethics!
8
Important issues in Study Design
Validity: Truth
 External Validity:
Can the study be generalized to the population
 Internal Validity:
Results will not be due to chance, bias or
confounding factors
 Symmetry Principle: Groups are similar
9
 Confounding: distortion of the effect of one risk factor by the
presence of another
 Bias: Any effect from design, execution, & interpretation that
shifts or influences results
 Confounding bias: failure to account for the effect of
one or more variables that are not distributed equally
 Measurement bias: measurement methods differ
between groups
 Sampling (selection) bias: design and execution
errors in sampling
Important issues in Study Design
10
Introduction
Why this study is needed ?
What is the purpose of this study?
 Was purpose known before the study?
 What has been done before and how does this
study differ?
 inadequacies of earlier work or next step in an
overall research project
 Does the location of the study have relevance?
11
Why doing a study?
 Alternative:
 census: test every individual in the population
 use available data, e.g. hospitals
But:
- data availability
- data quality
- cost
- questions require specific type of data and
circumstances
12
Clinical Study Types
 Observational Studies
 Cohort (Incidence, Longitudinal)
 Case-Control
 Cross-Sectional (Prevalence)
 Case Series
 Case Report
 Experimental Studies
 Uncontrolled Trials
 Controlled Trials
13
Types of observational studies
 Cross - sectional study
 Cohort study
 Case control study
 Case series/case reports
14
Characteristics of observational studies
 No control over study units
 need to clearly describe study individuals
 Can study risk factors that have serious consequences
 Study individuals in their natural environment (>>
extrapolation)
 Possibility of confounding
15
Aims of observational studies
 Evaluate the effect of a suspected
risk factor (exposure) on an outcome
(e.g. disease)
 define ‘exposure’ and ‘disease’
 Describe the impact of the risk factor
on the frequency of disease in a
population
16
Cross - Sectional Study
17
Cross - Sectional Study
 Exposure and disease measured once, i.e. at the same
point in time
present futurepast
n
exposed ?
diseased ?
18
Cross-Sectional: Pediatrician-to-Child Ratio
Greg et al. (2001) Pediatrics.107(2):e18
0
5
10
15
20
25
30
35
40Pediatriciansper
1000Children
Rural Urban
1981
1986
1991
1996
19
Cohort Studies
20
Cohort studies
 Follow-up studies; subjects selected on presence or
absence of exposure & absence of disease at one
point in time. Disease is then assessed for all subjects
at another point in time.
 Typically prospective but can be retrospective,
depending on temporal relationship between study
initiation & occurrence of disease.
21
Cohort Study (1)
 Individuals selected by exposure status and future
occurrence of disease measured
present futurepast
n
Exposed yes
no
disease ?
disease ?
22
Cohort studies (2)
 More clearly establish temporal sequence
between exposure & disease
 Allows direct measurement of incidence
 Examines multiple effects of a single exposure
(nurses’ health study, OC and breast, ovarian
cancers)
23
Cohort studies (3)
 Limitations:
 time consuming and expensive
 loss to follow-up & unavailability of data
 potential confounding factors
 inefficient for rare diseases
24
Prospective Cohort Study
without
outcome
Cohort
with outcome
with outcome
without
outcome
Exposed
Unexposed
Time
Onset
of study Direction of inquiry
Q: What will happen?
25
Case-Control Studies
26
Case-Control Study (1)
 Retrospective
 Can use hospital or health register data
 First identify cases
 Then identify suitable controls
 Hardest part: who is suitable ??
 Then inquire or retrieve previous exposure
 By interview
 By databases (e.g. hospital, health insurance)
27
Case-Control Study (2)
 Diseased and non-diseased individuals are selected
first
 Then past exposure status is retrieved
present futurepast
n
yes
no
diseaseexposed ?
exposed ?
28
Case-Control Study (3)
 Good for rare disease (e.g. cancer)
 Can study many risk factors at the same time
 Usually low cost
 Confounding likely
 OR (not RR !!)
29
Case-Control Study Design
Cases
Controls
Exposed
Unexposed
Exposed
Unexposed
TimeData
collection
Direction of inquiry
Q: What happened?
30
• Study subjects selected on basis of whether
they have (case) or do not have (control) a
disease
• Useful for disease with long latency period
• Efficient in terms of time & costs
• Particularly suited for rare diseases
• Examines multiple exposures to a single
disease
Case-Control study (4)
31
Case-control study (5)
Limitations:
(1) susceptible to bias (particularly selection &
recall)
(2) difficulties in selection of controls
(3) ascertainment of disease & exposure status
(4) inefficient for rare exposures unless
attributable risk is high
32
Case Selection
• Define source population
• Cases
– incident/prevalent
– diagnostic criteria (sensitivity + specificity)
• Controls
– selected from same population as cases
– select independent of exposure status
33
Control Selection
• Random selection from source population
• Hospital based controls:
– convenient selection
– controls from variety of diagnostic groups other
than case diagnosis
– avoid selection of diagnoses related to
particular risk factors
– limit number of diagnoses in individuals
34
Characteristic Cross -
Sectional
Case Control Cohort
Sampling Random sample:
population
Purposive sample:
diseased/non-
diseased
Purposive sample:
Exposed/non-
exposed
Time One point Retrospective Prospective
Causality Statistical
association
Screening for
many risk factors
Testing one (or
few) risk factors
Frequency
measure
Prevalence None Incidence
Risk
parameter
Prevalence (risk)
ratio, odds ratio
Odds ratio Relative risk, odds
ratio
Summary of Observational Studies
35
Clinical Trials
36
 Animal Tests Can:
 Suggest which drugs are likely to be effective in
humans
 Indicate which drugs may not be harmful in humans
 Animal Tests Cannot:
 Predict with absolute certainty what will happen in
humans
Clinical trials in drug development
(Any alternatives)
37
Clinical trial vs. Cross-sectional
 Clinical trial:
 Individuals selected by
entry condition
 Control over exposure
 Exposure groups fully
comparable
 Outcome measured after
allocating individuals to
exposure
 Therefore: causal
association likely
 Cross Sectional Study:
 Individuals selected
randomly
 Exposure observed as
occurring in nature (groups
not ‘identical’)
 Exposure AND outcome
measured at one point in
time
 No causal interpretation
Parallel Study
38
Treatment A
Treatment B
Outcomes
Crossover Study
39
Treatment ATreatment B
Outcome 1
Treatment A Treatment B
Outcome 2
40
Clinical Trial: Study Design
 Uncontrolled
 Controlled
 Before/after (cross-over)
 Historical
 Concurrent, not randomized
 Randomized
41
Non-randomized Trials
May Be Appropriate
• Early studies of new and untried therapies
• Uncontrolled early phase studies where the
standard is relatively ineffective
• Investigations which cannot be done within the
current climate of controversy
• Truly dramatic response
42
Advantages of Randomized
Control Clinical Trial
1. Randomization "tends" to produce comparable groups
2. Assure causal relationship
3. Randomization produces valid statistical tests
43
Disadvantages of
Randomized Control Clinical Trial
1. Generalizable Results?
 Participants studied may not represent general
study population.
2. Recruitment
 Hard
3. Acceptability of Randomization Process
 Some physicians will refuse
 Some participants will refuse
4. Administrative Complexity
44
Study Population
Subset of the general population determined by the
eligibility criteria
General population
Eligibility criteria
Study population
Enrollment
Study sample
Observed
45
Eligibility Criteria
(inclusion & exclusion)
 State in advance
 Consider
 Potential for effect of intervention
 Ability to detect that effect
 Safety
 Ability for informed consent
46
Method Outlines (1)
 The independent (predictor) and dependent (outcome)
variables in the study should be clearly identified, defined,
and Measured?
 How to choose subjects?
 Random or not
 Are they going to be representative of the population?
 Random selection is not random assignment
 Types of Blinding (Masking) Single, Double, Triple.
 Control group? How is it chosen?
 How are patients followed up? Who are the dropouts?
 How is the data quality insured? Reliability?
 Consider independent review of data? Compliance?
47
Methods outlines (2)
 Reference any unusual methods?
 Statistical methods specified in sufficient
details
 Is there a statement about sample size issues or
statistical power?
 ? multicenter study. Quality assurance
measures should be employed to obtain
consistency across sites?
48
Comparing Treatments
• Fundamental principle
• Groups must be alike in all important aspects and only differ in the
intervention each group receives
• In practical terms, “comparable treatment groups” means
“alike on the average”
• Randomization
• Each participant has the same chance of receiving any of the
interventions under study
• Allocation is carried out using a chance mechanism so that neither the
participant nor the investigator will know in advance which will be
assigned
• Blinding
• Avoidance of conscious or subconscious influence
• Fair evaluation of outcomes
49
Patients and Clinicians Kept Blind To
Treatment?
 Investigator
 Care taker
When to Unblind
1. Following an SAE
2. When treatment of an SAE depends upon the
treatment received in trial
3. Actually very few situations require unblinding
4. Physicians feel very uncomfortable when blind
procedures are done
50
Randomization
To reduce allotment bias
 Static Randomization
 Stratified Randomization
 Block Randomization
 Co-variate adaptive randomization
 Response adaptive randomization
51
52
 Monitoring and Management
--Data and safety monitoring
--Adverse event assessment, reporting
--Contingency procedures
--Withdrawal criteria
Methods outlines (3)
53
Regular Follow-up
 Routine Procedures (report forms)
 Interviews
 Examinations
 Laboratory Tests
 Adverse Event Detection/Reporting
 Quality Assurance
54
Compliance/adherence
 Pill counts and computers
 Diaries
 Biological tests
55
 Statistics
--Sample size
--Stopping guidelines
--Analysis plans
 Participant protection issues
Methods outlines (4)
56
Sample Size
 The study is an experiment in people
 Need enough participants to answer the
question
 Should not enroll more than needed to answer
the question
 Sample size is an estimate, using guidelines and
assumptions
57
Contingency Plans
 Patient management
 Evaluation and reporting to all relevant persons
and groups
 Data monitoring plans
 Protocol amendment or study termination
58
Human Subjects Protection
• Institutional Review Board
• Informed consent
• Different levels of risk
• Confidentiality as well as risk of new tx
• Patient can refuse to participate w/o effect
• Path to exit study known
• Compensation
59
Summary
 Selection of design should be made on the basis of the
particular hypothesis to be tested with consideration of
current state of knowledge
 Consider available resources when deciding on a study
design
 A clear and organized study design leads to successful
results
 Observational studies are especially valuable in
epidemiology
 Clinical trials carry the highest level of evidence and
should be pursued whenever feasible

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clinical trial designs

  • 2. 2 Research is to see what everybody else has seen, and to think what nobody else has thought. Albert Szent-Gyorgyi Definitions of Research
  • 3. Research Designs Observational Studies Where the exposure or assignment of subjects into a treated or control groups is beyond the scope of the investigator. Interventional Study Where exposure and allotment of subjects into treated and control groups is controlled by the investigator. 2/11/2020 3
  • 4. 4 Where to Start?  A good clinical study starts with  a good question based on good hypothesis that is based on good and comprehensive review of the available evidence from pre-clinical and clinical data  Type of design depends on the question to be answered
  • 5. 5 Formulating a Research Question  Focused and specific  What is the prevalence of Hepatitis B surface Antigen in India? Cross-sectional study  What are the risk factors for hepatitis B infection? Prospective cohort or case-control  Is interferon a useful therapy for hepatitis B infection? Therapeutic clinical trial
  • 6. 6 Objectives  Specific aims  Clear and detailed  End point(s)  Primary  The main answer to the research question  Secondary  Answer other related questions
  • 7. 7 Observational study  Clinical trial exposed non exposed outcome Clinical Trial observational studydescribe as occurring in nature allocate randomly Ethics!
  • 8. 8 Important issues in Study Design Validity: Truth  External Validity: Can the study be generalized to the population  Internal Validity: Results will not be due to chance, bias or confounding factors  Symmetry Principle: Groups are similar
  • 9. 9  Confounding: distortion of the effect of one risk factor by the presence of another  Bias: Any effect from design, execution, & interpretation that shifts or influences results  Confounding bias: failure to account for the effect of one or more variables that are not distributed equally  Measurement bias: measurement methods differ between groups  Sampling (selection) bias: design and execution errors in sampling Important issues in Study Design
  • 10. 10 Introduction Why this study is needed ? What is the purpose of this study?  Was purpose known before the study?  What has been done before and how does this study differ?  inadequacies of earlier work or next step in an overall research project  Does the location of the study have relevance?
  • 11. 11 Why doing a study?  Alternative:  census: test every individual in the population  use available data, e.g. hospitals But: - data availability - data quality - cost - questions require specific type of data and circumstances
  • 12. 12 Clinical Study Types  Observational Studies  Cohort (Incidence, Longitudinal)  Case-Control  Cross-Sectional (Prevalence)  Case Series  Case Report  Experimental Studies  Uncontrolled Trials  Controlled Trials
  • 13. 13 Types of observational studies  Cross - sectional study  Cohort study  Case control study  Case series/case reports
  • 14. 14 Characteristics of observational studies  No control over study units  need to clearly describe study individuals  Can study risk factors that have serious consequences  Study individuals in their natural environment (>> extrapolation)  Possibility of confounding
  • 15. 15 Aims of observational studies  Evaluate the effect of a suspected risk factor (exposure) on an outcome (e.g. disease)  define ‘exposure’ and ‘disease’  Describe the impact of the risk factor on the frequency of disease in a population
  • 17. 17 Cross - Sectional Study  Exposure and disease measured once, i.e. at the same point in time present futurepast n exposed ? diseased ?
  • 18. 18 Cross-Sectional: Pediatrician-to-Child Ratio Greg et al. (2001) Pediatrics.107(2):e18 0 5 10 15 20 25 30 35 40Pediatriciansper 1000Children Rural Urban 1981 1986 1991 1996
  • 20. 20 Cohort studies  Follow-up studies; subjects selected on presence or absence of exposure & absence of disease at one point in time. Disease is then assessed for all subjects at another point in time.  Typically prospective but can be retrospective, depending on temporal relationship between study initiation & occurrence of disease.
  • 21. 21 Cohort Study (1)  Individuals selected by exposure status and future occurrence of disease measured present futurepast n Exposed yes no disease ? disease ?
  • 22. 22 Cohort studies (2)  More clearly establish temporal sequence between exposure & disease  Allows direct measurement of incidence  Examines multiple effects of a single exposure (nurses’ health study, OC and breast, ovarian cancers)
  • 23. 23 Cohort studies (3)  Limitations:  time consuming and expensive  loss to follow-up & unavailability of data  potential confounding factors  inefficient for rare diseases
  • 24. 24 Prospective Cohort Study without outcome Cohort with outcome with outcome without outcome Exposed Unexposed Time Onset of study Direction of inquiry Q: What will happen?
  • 26. 26 Case-Control Study (1)  Retrospective  Can use hospital or health register data  First identify cases  Then identify suitable controls  Hardest part: who is suitable ??  Then inquire or retrieve previous exposure  By interview  By databases (e.g. hospital, health insurance)
  • 27. 27 Case-Control Study (2)  Diseased and non-diseased individuals are selected first  Then past exposure status is retrieved present futurepast n yes no diseaseexposed ? exposed ?
  • 28. 28 Case-Control Study (3)  Good for rare disease (e.g. cancer)  Can study many risk factors at the same time  Usually low cost  Confounding likely  OR (not RR !!)
  • 30. 30 • Study subjects selected on basis of whether they have (case) or do not have (control) a disease • Useful for disease with long latency period • Efficient in terms of time & costs • Particularly suited for rare diseases • Examines multiple exposures to a single disease Case-Control study (4)
  • 31. 31 Case-control study (5) Limitations: (1) susceptible to bias (particularly selection & recall) (2) difficulties in selection of controls (3) ascertainment of disease & exposure status (4) inefficient for rare exposures unless attributable risk is high
  • 32. 32 Case Selection • Define source population • Cases – incident/prevalent – diagnostic criteria (sensitivity + specificity) • Controls – selected from same population as cases – select independent of exposure status
  • 33. 33 Control Selection • Random selection from source population • Hospital based controls: – convenient selection – controls from variety of diagnostic groups other than case diagnosis – avoid selection of diagnoses related to particular risk factors – limit number of diagnoses in individuals
  • 34. 34 Characteristic Cross - Sectional Case Control Cohort Sampling Random sample: population Purposive sample: diseased/non- diseased Purposive sample: Exposed/non- exposed Time One point Retrospective Prospective Causality Statistical association Screening for many risk factors Testing one (or few) risk factors Frequency measure Prevalence None Incidence Risk parameter Prevalence (risk) ratio, odds ratio Odds ratio Relative risk, odds ratio Summary of Observational Studies
  • 36. 36  Animal Tests Can:  Suggest which drugs are likely to be effective in humans  Indicate which drugs may not be harmful in humans  Animal Tests Cannot:  Predict with absolute certainty what will happen in humans Clinical trials in drug development (Any alternatives)
  • 37. 37 Clinical trial vs. Cross-sectional  Clinical trial:  Individuals selected by entry condition  Control over exposure  Exposure groups fully comparable  Outcome measured after allocating individuals to exposure  Therefore: causal association likely  Cross Sectional Study:  Individuals selected randomly  Exposure observed as occurring in nature (groups not ‘identical’)  Exposure AND outcome measured at one point in time  No causal interpretation
  • 39. Crossover Study 39 Treatment ATreatment B Outcome 1 Treatment A Treatment B Outcome 2
  • 40. 40 Clinical Trial: Study Design  Uncontrolled  Controlled  Before/after (cross-over)  Historical  Concurrent, not randomized  Randomized
  • 41. 41 Non-randomized Trials May Be Appropriate • Early studies of new and untried therapies • Uncontrolled early phase studies where the standard is relatively ineffective • Investigations which cannot be done within the current climate of controversy • Truly dramatic response
  • 42. 42 Advantages of Randomized Control Clinical Trial 1. Randomization "tends" to produce comparable groups 2. Assure causal relationship 3. Randomization produces valid statistical tests
  • 43. 43 Disadvantages of Randomized Control Clinical Trial 1. Generalizable Results?  Participants studied may not represent general study population. 2. Recruitment  Hard 3. Acceptability of Randomization Process  Some physicians will refuse  Some participants will refuse 4. Administrative Complexity
  • 44. 44 Study Population Subset of the general population determined by the eligibility criteria General population Eligibility criteria Study population Enrollment Study sample Observed
  • 45. 45 Eligibility Criteria (inclusion & exclusion)  State in advance  Consider  Potential for effect of intervention  Ability to detect that effect  Safety  Ability for informed consent
  • 46. 46 Method Outlines (1)  The independent (predictor) and dependent (outcome) variables in the study should be clearly identified, defined, and Measured?  How to choose subjects?  Random or not  Are they going to be representative of the population?  Random selection is not random assignment  Types of Blinding (Masking) Single, Double, Triple.  Control group? How is it chosen?  How are patients followed up? Who are the dropouts?  How is the data quality insured? Reliability?  Consider independent review of data? Compliance?
  • 47. 47 Methods outlines (2)  Reference any unusual methods?  Statistical methods specified in sufficient details  Is there a statement about sample size issues or statistical power?  ? multicenter study. Quality assurance measures should be employed to obtain consistency across sites?
  • 48. 48 Comparing Treatments • Fundamental principle • Groups must be alike in all important aspects and only differ in the intervention each group receives • In practical terms, “comparable treatment groups” means “alike on the average” • Randomization • Each participant has the same chance of receiving any of the interventions under study • Allocation is carried out using a chance mechanism so that neither the participant nor the investigator will know in advance which will be assigned • Blinding • Avoidance of conscious or subconscious influence • Fair evaluation of outcomes
  • 49. 49 Patients and Clinicians Kept Blind To Treatment?  Investigator  Care taker
  • 50. When to Unblind 1. Following an SAE 2. When treatment of an SAE depends upon the treatment received in trial 3. Actually very few situations require unblinding 4. Physicians feel very uncomfortable when blind procedures are done 50
  • 51. Randomization To reduce allotment bias  Static Randomization  Stratified Randomization  Block Randomization  Co-variate adaptive randomization  Response adaptive randomization 51
  • 52. 52  Monitoring and Management --Data and safety monitoring --Adverse event assessment, reporting --Contingency procedures --Withdrawal criteria Methods outlines (3)
  • 53. 53 Regular Follow-up  Routine Procedures (report forms)  Interviews  Examinations  Laboratory Tests  Adverse Event Detection/Reporting  Quality Assurance
  • 54. 54 Compliance/adherence  Pill counts and computers  Diaries  Biological tests
  • 55. 55  Statistics --Sample size --Stopping guidelines --Analysis plans  Participant protection issues Methods outlines (4)
  • 56. 56 Sample Size  The study is an experiment in people  Need enough participants to answer the question  Should not enroll more than needed to answer the question  Sample size is an estimate, using guidelines and assumptions
  • 57. 57 Contingency Plans  Patient management  Evaluation and reporting to all relevant persons and groups  Data monitoring plans  Protocol amendment or study termination
  • 58. 58 Human Subjects Protection • Institutional Review Board • Informed consent • Different levels of risk • Confidentiality as well as risk of new tx • Patient can refuse to participate w/o effect • Path to exit study known • Compensation
  • 59. 59 Summary  Selection of design should be made on the basis of the particular hypothesis to be tested with consideration of current state of knowledge  Consider available resources when deciding on a study design  A clear and organized study design leads to successful results  Observational studies are especially valuable in epidemiology  Clinical trials carry the highest level of evidence and should be pursued whenever feasible