5. Low Risk Laboratory
⢠manipulate sputum specimens for direct sputum-smear microscopy;
⢠manipulate sputum specimens for the Xpert MTB/RIFŽassay
6. Specific features and essential minimum
biosafety measures
⢠Use of bench space
⢠Ventilation-natural/mechanical
⢠Minimizing the generation of aerosols
⢠Handling leaking specimen
⢠PPE-lab coat, gloves,mask
7. 7
Lab Coats
⢠Lab coats should close up the
front and have long sleeves
(closure can be snaps, buttons
or velcro)
⢠Washable and autoclavable
cloth, or disposable materials
⢠Worn for work on specimens
and AFB smears, not TB
culture work
8. Factors that increase the risk of infection
⢠Bench spaces may be used improperly;
⢠Specimen containers may leak
⢠Specimens manipulated carelessly may lead to subsequent
aerosolization;
⢠Specimens may be shaken vigorously;
⢠Ventilation or illumination may be poor.
9. Moderate Risk TB Laboratory
⢠Process specimens for inoculation on primary solid-culture media;
⢠Perform direct DST (for example, direct line-probe assays, Microscopic
observation drug susceptibility [MODS], Nitrate reductase assay
[NRA] on processed sputum
10. Factors that increase the risk of infection
⢠poor ventilation;
⢠BSCs
⢠The work environment
⢠Careless manipulation of specimens
⢠Precautions for using the vortex may not be followed
⢠Specimen containers may break or leak during centrifuging
11. Specific features and essential minimum
biosafety measures
⢠Biological safety cabinets
⢠Ventilation
⢠Personal protective equipment
⢠Laboratory design
⢠Decontamination and waste disposal
⢠Minimizing the generation of aerosols
12. 12
Laboratory Gowns
⢠Gowns should be worn for
specimen processing, TB
culture and DST
⢠Gowns should close and
tie in the back
⢠Gowns must be long-
sleeved and cuffed
⢠Gloves should be pulled
over the cuff for maximum
protection
⢠Fabric should be water
resistant
20. High-risk TB laboratories (TB-containment
laboratories)
⢠Manipulate cultures to identify M. tuberculosis;
⢠Manipulate cultures or suspensions of tubercle bacilli for all indirect
DST methods and molecular assays.
21. Factors that increase the risk of infection
⢠Staff must open positive culture vials;
⢠Staff must prepare smears from positive cultures;
⢠DNA extraction must be performed on a positive culture;
⢠Manipulation of cultures for identifi cation and indirect DST;
⢠Broken culture containers must be disposed of;
⢠Cultures or areas where spills occurred must be decontaminated.
22. Specific features and required
biosafety measures
⢠Laboratory design
⢠Personal protective equipment
⢠Decontamination and waste disposal facility
24. 24
4 Main Types of Disinfectants
â˘Phenol-based
â˘Hypochlorite (bleach)
â˘Peroxygens (peracetic acid)
â˘Alcohol
25. 25
Phenol-based Disinfectants
⢠Main uses for phenol-based disinfectants:
⢠In discard containers that are used for:
⢠Decanting contaminated liquids
⢠Discarding contaminated supplies
⢠Surface decontamination
⢠Clean up of spills â both major and minor, inside and outside BSC
⢠For phenol-based disinfectants to be effective
⢠Disinfectant must be left in contact with contaminated material for
at least 15 minutes to ensure killing
27. 27
Chemical Safety: Phenol crystals
⢠Phenol is corrosive and highly irritating to the
skin, eyes, and mucous membranes
⢠Gloves must be worn when handling
phenol crystals
⢠Spills must be carefully cleaned up
⢠Phenol disinfectant solutions should be prepared
weekly to ensure efficient killing of TB (labeled
with date of preparation)
28. 28
Hypochlorite (Bleach)
⢠Main uses for hypochlorite (bleach)
⢠In discard containers that are used for:
⢠Decanting contaminated liquids
⢠Discarding contaminated supplies
⢠Surface decontamination
⢠For hypochlorite disinfectants to be effective in killing
TB
⢠Disinfectant must be left in contact with contaminated material for at
least 15 minutes
⢠Diluted solution must be prepared daily because escape of chlorine
gas lessens disinfectant activity
⢠Know initial percentage of NaOCl in concentrated solution
⢠Final chlorine concentration should not fall below 0.5%
29. 29
Hypochlorite (Bleach) is Corrosive
⢠Bleach, even in diluted solutions, is irritating to the
skin and VERY corrosive to metal and plastic surfaces
(such as BSCs, centrifuges, pipettors)
⢠If used to disinfect metal and plastic surfaces:
⢠Wash the surface with sterile water or 70% alcohol after
the bleach has disinfected the area (for at least 15
minutes)
30. 30
Alcohol
⢠Alcohol used as a surface disinfectant
⢠Surface decontamination on both skin and work surfaces
⢠Denatured ethanol diluted and used as 70% solution
⢠Safe for use on metal (BSCs, centrifuges, other
equipment)
⢠Major advantage: will not corrode or leave a residue
on treated items
⢠High evaporation rate: An absorbent surface that is
sprayed with 70% Alcohol has disinfection activity for
only 20 minutes â not appropriate for specimen
processing
31. 31
Spills
⢠When a spill occurs the laboratory staff must first
decide how to react
⢠The actions required are dependent on:
⢠Where the spill occurred
⢠Inside the BSC
⢠Outside the BSC
⢠The severity of the spill
⢠Type of culture (solid or liquid)
⢠Amount of live organisms involved
32. 32
Small spills in the BSC
⢠Clean up spill with absorbent paper towel saturated with
disinfectant such as 5% phenol or hypochlorite
⢠Place contaminated absorbent paper towel into a disposable
bag while in the BSC, tie the bag and place it in container to
be autoclaved
⢠Change gloves if gloves have been contaminated
⢠Immediately wipe the interior surface and walls of the
biosafety cabinet and any items or equipment within the
cabinet with a paper towel saturated with a disinfectant
solution (5% phenol)
33. 33
Large spills in the BSC
⢠More extensive decontamination is needed
⢠Surface-decontaminate and remove all items from
the BSC
⢠Ensure the drain valve is closed
⢠Pour appropriate disinfectants onto the work surface
â˘ALLOW AT LEAST 30 MINUTES FOR
DECONTAMINATION!
⢠Empty the drain pan into a collection vessel
containing disinfectant
34. 34
Spills outside the BSC
⢠Notify ALL persons in the lab to evacuate immediatelyâŚ. YELL âSPILLâ
⢠Everyone without respiratory protection need to leave the laboratory
immediately while holding breath as much as possible
⢠Make sure BSCs are on
⢠Leave the room and stay outside with the door closed to allow aerosols to
settle for at least 4 hours or overnight
⢠Using appropriate respiratory protection, gown, and gloves from spill kit,
return to the accident area to clean the spill (see details on cleaning a
major spill in Stepwise Guide for Biohazard Spills)
⢠ALWAYS HAVE A WELL-STOCKED SPILL KIT LOCATED OUTSIDE THE
LABORATORY!!!
35. 35
Contents of the SPILL KIT
⢠Instructions (SOP) for spill clean-up
⢠Phenol disinfectant
⢠Biohazard signs for laboratory doors
⢠Autoclave bags
⢠Absorbent towels or cotton
⢠N-95 respirators
⢠Gown or jumpsuit
⢠Shoe covers
⢠Gloves (different sizes)
36. 36
Spills in the centrifuge
⢠Tubes containing patient specimens or TB
isolates can break or leak during the stress
of centrifugation
⢠If a tube breaks or leaks in a centrifuge
with no safety cups follow the
procedure for a spill outside the BSC!
⢠Containment of tube leakage is the main
advantage of using safety cups
⢠Contains aerosols produced during
centrifugation
⢠Contains release of contaminated liquids
inside centrifuge
⢠Reduces risk of aerosol escape or surface
contamination during clean up
37. 37
Contaminated centrifuge safety cups
⢠First steps in clean-up
⢠Remove unopened safety cup with broken or leaked tube
from the centrifuge and place it in the BSC
⢠Let sit undisturbed for 30 minutes
⢠Then, disinfect inside surfaces of centrifuge
⢠In the BSC
⢠Carefully open the safety cup, place lid next to cup, top
down
⢠Disinfect outer surface of uncompromised tubes by wiping
with disinfectant soaked cotton/gauze
⢠Pour disinfectant into the cup and lid taking care not to
splash
⢠Let stand for 30 minutes, then pour off disinfectant and
broken tube into discard container to be autoclaved
⢠Disinfect the entire inside surface of the BSC
⢠Wash cup, lid and insert in hot soapy water, remove O-ring
to clean underneath, air dry, re-silicone the O-ring
43. Donât Do
Vigorous shaking or votexing of open tube Vortexing of closed tubes
Mouth pipetting Disposable pippets
Heating of smear before air drying Proper air drying of smear
Surgical mask Respirators
Drinking, Eating, Mobile phones No eating, drinking or use of mobile phones
Entry in all rooms by all persons Restricted entry, dividing work area as clean and
contaminated
Bench works Use of biosafety cabinets
Avoiding routine check up for TB diagnosis Regular check up for TB diagnosis