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ANTABIF:      Bruno Danis - MARS workshop                     Architecture and FunctionalitiesThursday 10 May 12
Antarctic Treaty                     « In order to promote international                     cooperation in scientific inve...
Slide stolen from Mark Parsons      Our	  vision:      [ANTARCTIC	  BIODIVERSITY]	  Data	  are	        open,	  linked,	  u...
Antarctic Information Networks - scope          Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO   David B, Danis B, Griffi...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Antarctic Information Networks - scope      • Born as Census of Antarctic Marine Life        as the data, visualization an...
Collaboration cloud - who’s in?Thursday 10 May 12
Collaboration cloud - who’s in?Thursday 10 May 12
Taxonomy                                          17,098 taxa     The first dynamic Register of Antarctic Marine Species   ...
Taxonomy                                          17,098 taxa     The first dynamic Register of Antarctic Marine Species   ...
Biogeography      • Single access to 900 datasets      • 2.5 million records      • Data back to 1900 (Pygoscelis        a...
Biogeography      • Single access to 900 datasets      • 2.5 million records      • Data back to 1900 (Pygoscelis        a...
Antarctic Information Networks - applications                                     Danis et al, The SCAR Antarctic Field Gu...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation                        ...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation      • Expedition desig...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation      • Expedition desig...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation      • Expedition desig...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation      • Expedition desig...
Antarctic Information Networks - applications      • Data-driven Marine Protected Area designation      • Expedition desig...
FunctionalitiesThursday 10 May 12
biodiversity.aqThursday 10 May 12
biodiversity.aq                     • www.biodiversity.aqThursday 10 May 12
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aqThursday 10 May 12
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aq                     •...
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aq                     •...
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aq                     •...
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aq                     •...
biodiversity.aq                     • www.biodiversity.aq                     • data.biodiversity.aq                     •...
www. biodiversity.aq         • general website         • latest news         • contact         • sponsors         • govern...
www. biodiversity.aq                           -Resources-Thursday 10 May 12
www. biodiversity.aq                          -shared repository-Thursday 10 May 12
www. biodiversity.aq                            -Mendeley-Thursday 10 May 12
www. biodiversity.aq                            -Pictures-Thursday 10 May 12
data. biodiversity.aq                     • find primary biodiversity data                     • visualize occurrence data ...
Data portal recipe     • Language: Ruby     • Framework: Rails(ActiveRecord) and YUI     • (smart) Search engine: Full tex...
Data portal recipeThursday 10 May 12
Data portal recipe                       GEO ORIENTEDThursday 10 May 12
Data portal recipe                       GEO ORIENTED                       OPEN SOURCEThursday 10 May 12
Data portal recipe                       GEO ORIENTED                       OPEN SOURCE                         FLEXIBLETh...
Data portal recipe                       GEO ORIENTED                        OPEN SOURCE                          FLEXIBLE...
Data portal recipe                       GEO ORIENTED                        OPEN SOURCE                           FLEXIBL...
data. biodiversity.aqThursday 10 May 12
Thursday 10 May 12
Thursday 10 May 12
Thursday 10 May 12
Thursday 10 May 12
Thursday 10 May 12
ipt. biodiversity.aq                     • Integrated Publishing Toolkit                     • standardize and clean your ...
ipt. biodiversity.aqThursday 10 May 12
ipt. biodiversity.aqThursday 10 May 12
ipt. biodiversity.aqThursday 10 May 12
ipt. biodiversity.aqThursday 10 May 12
ipt. biodiversity.aqThursday 10 May 12
Reward data publishing                     Metadata document   Data PaperThursday 10 May 12
The Data Paper        • A scholarly journal publication whose primary purpose is to          describe a dataset or group o...
Incentivising Data DiscoveryThursday 10 May 12
Step-by-Step       • Complete metadata of a dataset using metadata editor in         IPT 2.0.2       • Generate ‘Data Pape...
Once paper is accepted        • Digital Object Identifier is assigned to the Data Paper        • Paper is published in (a) ...
Important to consider        • Metadata is complete in all the respect        • All the claims are adequately substantiate...
This is real                                            ZooKeys 185: 73–78 (2012)                                         ...
This is real                                            ZooKeys 185: 73–78 (2012)                                         ...
This is real                                            ZooKeys 185: 73–78 (2012)                                         ...
afg. biodiversity.aq                     • Identification aid                     • Publication/sharing platform for       ...
afg. biodiversity.aqThursday 10 May 12
afg. biodiversity.aqThursday 10 May 12
afg. biodiversity.aqThursday 10 May 12
atlas. biodiversity.aqThursday 10 May 12
atlas. biodiversity.aq      • Biogeographic Atlas of the Southern OceanThursday 10 May 12
atlas. biodiversity.aq      • Biogeographic Atlas of the Southern Ocean      • Redo of Hedgepeth 1969 FolioThursday 10 May...
atlas. biodiversity.aq      • Biogeographic Atlas of the Southern Ocean      • Redo of Hedgepeth 1969 Folio      • Predict...
atlas. biodiversity.aq      • Biogeographic Atlas of the Southern Ocean      • Redo of Hedgepeth 1969 Folio      • Predict...
atlas. biodiversity.aqThursday 10 May 12
atlas. biodiversity.aq      • Dynamic approach to a Biogeographic AtlasThursday 10 May 12
atlas. biodiversity.aq      • Dynamic approach to a Biogeographic Atlas      • Collaborative project: 70+ specialists invo...
atlas. biodiversity.aq      • Dynamic approach to a Biogeographic Atlas      • Collaborative project: 70+ specialists invo...
atlas. biodiversity.aq      • Dynamic approach to a Biogeographic Atlas      • Collaborative project: 70+ specialists invo...
Available data layers   Slope                                             Bathymetry                                      ...
Available data layers   Slope                                             Bathymetry                                      ...
Thursday 10 May 12
Perspectives for MARSThursday 10 May 12
Community              • Get the Community involved in data                management              • Enhance interoperabil...
Challenges                     • Data deluge                     • Digital divides                     • Missing data type...
ANTABIF on MARSThursday 10 May 12
ANTABIF on MARS                     • Architectural plasticityThursday 10 May 12
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extensionThursday 1...
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extension          ...
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extension          ...
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extension          ...
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extension          ...
ANTABIF on MARS                     • Architectural plasticity                     • DarwinCore + MiXS extension          ...
Thanks and questions?                             @biodiversityaq                                image	  ©	  NY	  Times	  ...
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Antabif on mars

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Presentation on ANTABIF and how it could accomodate microbial diversity data.

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Transcript of "Antabif on mars"

  1. 1. ANTABIF: Bruno Danis - MARS workshop Architecture and FunctionalitiesThursday 10 May 12
  2. 2. Antarctic Treaty « In order to promote international cooperation in scientific investigation in Antarctica, […], Scientific observations and results from Antarctica shall be exchanged and made freely available. »Thursday 10 May 12
  3. 3. Slide stolen from Mark Parsons Our  vision: [ANTARCTIC  BIODIVERSITY]  Data  are   open,  linked,  useful,  interoperable  and  safe. Copyright: © Christian MorelThursday 10 May 12
  4. 4. Antarctic Information Networks - scope Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  5. 5. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  6. 6. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  7. 7. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data • SCAR-MarBIN and ANTABIF projects Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  8. 8. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data • SCAR-MarBIN and ANTABIF projects • Science, conservation and management Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  9. 9. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data • SCAR-MarBIN and ANTABIF projects • Science, conservation and management • Networked community developments Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  10. 10. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data • SCAR-MarBIN and ANTABIF projects • Science, conservation and management • Networked community developments • SCAR-MarBIN: Citations : 423, Publications: 58, H-Index: 11 Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  11. 11. Antarctic Information Networks - scope • Born as Census of Antarctic Marine Life as the data, visualization and analysis component • Free and open access to biodiversity data • SCAR-MarBIN and ANTABIF projects • Science, conservation and management • Networked community developments • SCAR-MarBIN: Citations : 423, Publications: 58, H-Index: 11 Funding: BELSPO, SLOAN, DFG, AWI, SCAR, AAD, NWO David B, Danis B, Griffiths HJThursday 10 May 12
  12. 12. Collaboration cloud - who’s in?Thursday 10 May 12
  13. 13. Collaboration cloud - who’s in?Thursday 10 May 12
  14. 14. Taxonomy 17,098 taxa The first dynamic Register of Antarctic Marine Species Taxonomic backbone Board of 64 editors Feeds World Register of Marine Species, Catalogue of Life and Encyclopedia of Life De Broyer et al, Register of Antarctic Marine Species 2012 Virtually nothing on Bacteria!!Thursday 10 May 12
  15. 15. Taxonomy 17,098 taxa The first dynamic Register of Antarctic Marine Species Taxonomic backbone Board of 64 editors Feeds World Register of Marine Species, Catalogue of Life and Encyclopedia of Life De Broyer et al, Register of Antarctic Marine Species 2012 Virtually nothing on Bacteria!!Thursday 10 May 12
  16. 16. Biogeography • Single access to 900 datasets • 2.5 million records • Data back to 1900 (Pygoscelis adeliae) • Spatial data on over 5000 taxa • Downloadable • Interoperable • Free and open Danis et al, Antarctic Biodiversity Information Facility 2012 • Virtually nothing on Bacteria!!Thursday 10 May 12
  17. 17. Biogeography • Single access to 900 datasets • 2.5 million records • Data back to 1900 (Pygoscelis adeliae) • Spatial data on over 5000 taxa • Downloadable • Interoperable • Free and open Danis et al, Antarctic Biodiversity Information Facility 2012 • Virtually nothing on Bacteria!!Thursday 10 May 12
  18. 18. Antarctic Information Networks - applications Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  19. 19. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  20. 20. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation • Expedition design Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  21. 21. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation • Expedition design • Biogeographic patterns Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  22. 22. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation • Expedition design • Biogeographic patterns • Antarctic Field Guides Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  23. 23. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation • Expedition design • Biogeographic patterns • Antarctic Field Guides • Biogeographic Atlas Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  24. 24. Antarctic Information Networks - applications • Data-driven Marine Protected Area designation • Expedition design • Biogeographic patterns • Antarctic Field Guides • Biogeographic Atlas • Gap analysis Danis et al, The SCAR Antarctic Field Guides 2012Thursday 10 May 12
  25. 25. FunctionalitiesThursday 10 May 12
  26. 26. biodiversity.aqThursday 10 May 12
  27. 27. biodiversity.aq • www.biodiversity.aqThursday 10 May 12
  28. 28. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aqThursday 10 May 12
  29. 29. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aq • ipt.biodiversity.aqThursday 10 May 12
  30. 30. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aq • ipt.biodiversity.aq • afg.biodiversity.aqThursday 10 May 12
  31. 31. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aq • ipt.biodiversity.aq • afg.biodiversity.aq • atlas.biodiversity.aqThursday 10 May 12
  32. 32. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aq • ipt.biodiversity.aq • afg.biodiversity.aq • atlas.biodiversity.aq • share.biodiversity.aqThursday 10 May 12
  33. 33. biodiversity.aq • www.biodiversity.aq • data.biodiversity.aq • ipt.biodiversity.aq • afg.biodiversity.aq • atlas.biodiversity.aq • share.biodiversity.aq • mars.biodiversity.aq ?Thursday 10 May 12
  34. 34. www. biodiversity.aq • general website • latest news • contact • sponsors • governance • ressourcesThursday 10 May 12
  35. 35. www. biodiversity.aq -Resources-Thursday 10 May 12
  36. 36. www. biodiversity.aq -shared repository-Thursday 10 May 12
  37. 37. www. biodiversity.aq -Mendeley-Thursday 10 May 12
  38. 38. www. biodiversity.aq -Pictures-Thursday 10 May 12
  39. 39. data. biodiversity.aq • find primary biodiversity data • visualize occurrence data on map • view taxonomic data • download data • view metrics • send feedback • access technical documentationThursday 10 May 12
  40. 40. Data portal recipe • Language: Ruby • Framework: Rails(ActiveRecord) and YUI • (smart) Search engine: Full text (ElasticSearch-Lucene) • Database/GIS server/SpatialDB: PostGresql/ Geoserver/PostGIS • Mapping client: OpenLayers • Web services: RESTish (all resources) • Protocols/Standards: DIF, DwC, DwC-A, Tapir…etc • GBIF tools : HIT, IPT • Hosting: BeBIF (ULB/VUB joint IT Center) • Metadata systems: GCMD API (DIF), EMLThursday 10 May 12
  41. 41. Data portal recipeThursday 10 May 12
  42. 42. Data portal recipe GEO ORIENTEDThursday 10 May 12
  43. 43. Data portal recipe GEO ORIENTED OPEN SOURCEThursday 10 May 12
  44. 44. Data portal recipe GEO ORIENTED OPEN SOURCE FLEXIBLEThursday 10 May 12
  45. 45. Data portal recipe GEO ORIENTED OPEN SOURCE FLEXIBLE INTEROPERABLEThursday 10 May 12
  46. 46. Data portal recipe GEO ORIENTED OPEN SOURCE FLEXIBLE INTEROPERABLE EXPANDABLEThursday 10 May 12
  47. 47. data. biodiversity.aqThursday 10 May 12
  48. 48. Thursday 10 May 12
  49. 49. Thursday 10 May 12
  50. 50. Thursday 10 May 12
  51. 51. Thursday 10 May 12
  52. 52. Thursday 10 May 12
  53. 53. ipt. biodiversity.aq • Integrated Publishing Toolkit • standardize and clean your data • manage your primary biodiversity data • manage your associated metadata • choose your collaborators • generate and submit a Data Paper • push data and metadata to Information SystemsThursday 10 May 12
  54. 54. ipt. biodiversity.aqThursday 10 May 12
  55. 55. ipt. biodiversity.aqThursday 10 May 12
  56. 56. ipt. biodiversity.aqThursday 10 May 12
  57. 57. ipt. biodiversity.aqThursday 10 May 12
  58. 58. ipt. biodiversity.aqThursday 10 May 12
  59. 59. Reward data publishing Metadata document Data PaperThursday 10 May 12
  60. 60. The Data Paper • A scholarly journal publication whose primary purpose is to describe a dataset or group of datasets, rather than to report a research investigation. • Benefits of the Data Paper – Scholarly credit to Data Publishers – Describe the data in structured human readable form – Bring the existence of the data to the attention of the scholarly communityThursday 10 May 12
  61. 61. Incentivising Data DiscoveryThursday 10 May 12
  62. 62. Step-by-Step • Complete metadata of a dataset using metadata editor in IPT 2.0.2 • Generate ‘Data Paper’ manuscript (menu: Manage Resource – RTF Download) • Submit the manuscript for possible publication in one of the PenSoft publication (ZooKeys, PhytoKeys, BioRisks, NeoBiota, Biodiversity Data Journal, Nature Conservation). • Revision (if any) is carried out using metadata editor in IPT 2.0.2 and manuscript re-submitted to PenSoft Open Journal SystemThursday 10 May 12
  63. 63. Once paper is accepted • Digital Object Identifier is assigned to the Data Paper • Paper is published in (a) print format, (b) PDF format, (c) semantically enhanced HTML, and (d) XML is archived in PubMedCentral • DOI of the Data Paper is linked with the Persistent Identifier of the metadata document in the GBIF Registry • Data Paper is indexed by Web of Knowledge (ISI), PubMedCentral, Scopus, Zoological Record, Google Scholar, CAB Abstracts, Directory of Open Access Journal (DOAJ), EBSCO.Thursday 10 May 12
  64. 64. Important to consider • Metadata is complete in all the respect • All the claims are adequately substantiated • Data described in ‘Data Paper’ is freely available at the time of submission of the manuscriptThursday 10 May 12
  65. 65. This is real ZooKeys 185: 73–78 (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition doi: 10.3897/zookeys.185.3078 DAtA PAPEr A peer-reviewed open-access journal 73 www.zookeys.org Launched to accelerate biodiversity research Antarctic Starfish (Echinodermata, Asteroidea) from the ANDEEP3 expedition Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2 1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt, 1050, Brussels, Belgium Corresponding author: Bruno Danis (bruno.danis@gmail.com) Academic editor: Vishwas Chavan  |  Received 13 March 2012  |  Accepted 18 April 2012  |  Published 23 April 2012 Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078 Abstract This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea. Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from -41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ). The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132 specimens. The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this study, most of the information available focused on starfish from shallower depths than 1000m. This dataset allowed to make unique observations, such as the fact that some species were only present at very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti, Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below -3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er- emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)). Even if the number of records is relatively small, the data bring many new insights on the taxonomic, bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The dataset also brings to light six species, newly reported in the Southern Ocean. The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys- tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux- Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC- BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Thursday 10 May 12
  66. 66. This is real ZooKeys 185: 73–78 (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition doi: 10.3897/zookeys.185.3078 DAtA PAPEr A peer-reviewed open-access journal 73 www.zookeys.org Launched to accelerate biodiversity research Antarctic Starfish (Echinodermata, Asteroidea) from the ANDEEP3 expedition Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2 1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt, 1050, Brussels, Belgium Corresponding author: Bruno Danis (bruno.danis@gmail.com) Academic editor: Vishwas Chavan  |  Received 13 March 2012  |  Accepted 18 April 2012  |  Published 23 April 2012 Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078 Abstract This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea. Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from -41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ). The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132 specimens. The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this study, most of the information available focused on starfish from shallower depths than 1000m. This dataset allowed to make unique observations, such as the fact that some species were only present at very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti, Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below -3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er- emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)). Even if the number of records is relatively small, the data bring many new insights on the taxonomic, bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The dataset also brings to light six species, newly reported in the Southern Ocean. The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys- tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux- Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC- BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Thursday 10 May 12
  67. 67. This is real ZooKeys 185: 73–78 (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition doi: 10.3897/zookeys.185.3078 DAtA PAPEr A peer-reviewed open-access journal 73 www.zookeys.org Launched to accelerate biodiversity research Antarctic Starfish (Echinodermata, Asteroidea) from the ANDEEP3 expedition Impact Factor: 0.514 Bruno Danis1, Michel Jangoux2, Jennifer Wilmes2 1 ANTABIF, 29, rue Vautier, 1000, Brussels, Belgium 2 Université Libre de Bruxelles, 50, av FD Roosevelt, 1050, Brussels, Belgium Corresponding author: Bruno Danis (bruno.danis@gmail.com) Academic editor: Vishwas Chavan  |  Received 13 March 2012  |  Accepted 18 April 2012  |  Published 23 April 2012 Citation: Danis B, Jangoux M, Wilmes J (2012) Antarctic Starfish (Echinodermata: asteroidea) from the ANDEEP3 expedition. ZooKeys 185: 73–78. doi: 10.3897/zookeys.185.3078 Abstract This dataset includes information on sea stars collected during the ANDEEP3 expedition, which took place in 2005. The expedition focused on deep-sea stations in the Powell Basin and Weddell Sea. Sea stars were collected using an Agassiz trawl (3m, mesh-size 500µm), deployed in 16 stations during the ANTXXII/3 (ANDEEP3, PS72) expedition of the RV Polarstern. Sampling depth ranged from 1047 to 4931m. Trawling distance ranged from 731 to 3841m. The sampling area ranges from -41°S to -71°S (latitude) and from 0 to -65°W (longitude). A complete list of stations is available from the PANGAEA data system (http://www.pangaea.de/PHP/CruiseReports.php?b=Polarstern), including a cruise report (http://epic-reports.awi.de/3694/1/PE_72.pdf ). The dataset includes 50 records, with individual counts ranging from 1-10, reaching a total of 132 specimens. The andeep3-Asteroidea is a unique dataset as it covers an under-explored region of the Southern Ocean, and that very little information was available regarding Antarctic deep-sea starfish. Before this study, most of the information available focused on starfish from shallower depths than 1000m. This dataset allowed to make unique observations, such as the fact that some species were only present at very high depths (Hymenaster crucifer, Hymenaster pellucidus, Hymenaster praecoquis, Psilaster charcoti, Freyella attenuata, Freyastera tuberculata, Styrachaster chuni and Vemaster sudatlanticus were all found below -3770m), while others displayed remarkable eurybathy, with very high depths amplitudes (Bathybiaster loripes (4842m), Lysasterias adeliae (4832m), Lophaster stellans (4752m), Cheiraster planeta (4708m), Er- emicaster crassus (4626m), Lophaster gaini (4560m) and Ctenodiscus australis (4489m)). Even if the number of records is relatively small, the data bring many new insights on the taxonomic, bathymetric and geographic distributions of Southern starfish, covering a very large sampling zone. The dataset also brings to light six species, newly reported in the Southern Ocean. The quality of the data was controlled very thoroughly, by means of on-board Polarstern GPS sys- tems, checking of identification by a renowned specialist (Prof. Michel Jangoux, Université Libre de Brux- Copyright Bruno Danis et al. This is an open access article distributed under the terms of the Creative Commons Attribution License 3.0 (CC- BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.Thursday 10 May 12
  68. 68. afg. biodiversity.aq • Identification aid • Publication/sharing platform for customized Field Guides • High quality (useful) pictures • Expert Descriptions • Built dynamically from various sources • Generate a pdf for your taxa/area of interest, and shareThursday 10 May 12
  69. 69. afg. biodiversity.aqThursday 10 May 12
  70. 70. afg. biodiversity.aqThursday 10 May 12
  71. 71. afg. biodiversity.aqThursday 10 May 12
  72. 72. atlas. biodiversity.aqThursday 10 May 12
  73. 73. atlas. biodiversity.aq • Biogeographic Atlas of the Southern OceanThursday 10 May 12
  74. 74. atlas. biodiversity.aq • Biogeographic Atlas of the Southern Ocean • Redo of Hedgepeth 1969 FolioThursday 10 May 12
  75. 75. atlas. biodiversity.aq • Biogeographic Atlas of the Southern Ocean • Redo of Hedgepeth 1969 Folio • Predictive approachThursday 10 May 12
  76. 76. atlas. biodiversity.aq • Biogeographic Atlas of the Southern Ocean • Redo of Hedgepeth 1969 Folio • Predictive approach • Static and dynamic versionsThursday 10 May 12
  77. 77. atlas. biodiversity.aqThursday 10 May 12
  78. 78. atlas. biodiversity.aq • Dynamic approach to a Biogeographic AtlasThursday 10 May 12
  79. 79. atlas. biodiversity.aq • Dynamic approach to a Biogeographic Atlas • Collaborative project: 70+ specialists involvedThursday 10 May 12
  80. 80. atlas. biodiversity.aq • Dynamic approach to a Biogeographic Atlas • Collaborative project: 70+ specialists involved • interdisciplinary: taxonomy, oceanography, ecology, phylogeography, modelization, data management, GIS, conservationistsThursday 10 May 12
  81. 81. atlas. biodiversity.aq • Dynamic approach to a Biogeographic Atlas • Collaborative project: 70+ specialists involved • interdisciplinary: taxonomy, oceanography, ecology, phylogeography, modelization, data management, GIS, conservationists • Modelization workshop coming upThursday 10 May 12
  82. 82. Available data layers Slope Bathymetry Chlorophyll Distance to the continent Distance to bird colonies Distance to ice Distance to shelf Distance to canyon Floor temperature + ANTABIF Occurrence recordsThursday 10 May 12
  83. 83. Available data layers Slope Bathymetry Chlorophyll Distance to the continent Distance to bird colonies Distance to ice Distance to shelf Distance to canyon Floor temperature + ANTABIF Occurrence recordsThursday 10 May 12
  84. 84. Thursday 10 May 12
  85. 85. Perspectives for MARSThursday 10 May 12
  86. 86. Community • Get the Community involved in data management • Enhance interoperability • Optimize research efforts/resources • Towards integrative, connected science through Open AccessThursday 10 May 12
  87. 87. Challenges • Data deluge • Digital divides • Missing data types • Orphan datasets • Cultural changeThursday 10 May 12
  88. 88. ANTABIF on MARSThursday 10 May 12
  89. 89. ANTABIF on MARS • Architectural plasticityThursday 10 May 12
  90. 90. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extensionThursday 10 May 12
  91. 91. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extension • GBIF IPT/HITThursday 10 May 12
  92. 92. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extension • GBIF IPT/HIT • InteroperabilityThursday 10 May 12
  93. 93. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extension • GBIF IPT/HIT • Interoperability • ElasticSearchThursday 10 May 12
  94. 94. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extension • GBIF IPT/HIT • Interoperability • ElasticSearch • Strong communityThursday 10 May 12
  95. 95. ANTABIF on MARS • Architectural plasticity • DarwinCore + MiXS extension • GBIF IPT/HIT • Interoperability • ElasticSearch • Strong community • Incentives and valorizationThursday 10 May 12
  96. 96. Thanks and questions? @biodiversityaq image  ©  NY  Times  Thursday 10 May 12
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