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Mining Data for Ore: Natural
Language Processing to
Identify Lithium Minerals in
Scientific Literature
Natalia Martinez Ojeda
Polytechnic University of Puerto Rico
Michael Whittaker (mentor)
Lawrence Berkeley National Lab
Berkeley Lab Undergraduate Research (BLUR) Internship Program
EERE Energy Storage Program
Agenda
Introduction
Materials and
Methods
Results
Conclusions
Introduction
Lithium is important, because it is a part of battery
technology. We don’t have enough and we need better
ways to extract it.
Introduction
Finding sources of lithium can be
a challenge. Lithium is difficult to
detect.
We don’t know much about it,
which can make it costly to
extract.
Introduction
Clay Minerals: an untapped source of lithium
Classifying Clay Minerals
International Mineralogical
Association
• Approved
• Grandfathered
• Renamed
• Redefined
• Questionable
The Clay Minerals Society
• Source Clays
• Special Clays
Natural Language Processing
Kononova et al. (2021)
Goal of the project
Natural Language
Processing
hectorite
Materials
• Experiments ran using Python
• Anaconda Individual Edition
• Word2vec
• Lists from:
• International Mineralogical Society
• The Clay Minerals Society
• Elsevier Science Direct API
• Google Drive API
Methods
• Hectorite 100 Most Similar Words
• Filtering Method: Manual vs List Filtering
• Hectorite vs Synthetic Hectorite
• Hectorite – lithium experiment
mat2vec
• Gathering a text corpus clay mineral literature
• Preprocessing
• Text representation
• Training the model
• Doing the queries
hec2vec
Results: Hectorite in
mat2vec
100 Most
Similar
Words to
Hectorite
100 Most
Similar
Words to
Hectorite
(Manually
Filtered)
montmorillonite
saponite
vermiculite
LAPONITE_®
bentonite
sodium_montmorillonite
cloisite_®_na+
synthetic_hectorite
laponite_RD
fluorohectorite
beidellite
taeniolite
kaolinite
wyoming_bentonite
sepiolite
magadiite
synthetic_saponite
laponite
montmorrillonite
nontronite
vermiculites
h-montmorillonite
XLG
MX80
cheto
rectorite
Kunipia-F
wyoming_montmorillonite
hectorite
-40
-30
-20
-10
0
10
20
30
40
-60 -40 -20 0 20 40 60
t-SNE_2
t-SNE_1
Hectorite Top 100 Most Similar Words:
Manually Filtered
100 Most
Similar
Words to
Hectorite
(List
Filtering)
rectorite
nontronite
kaolinite
magadiite
montmorillonite
saponite
vermiculite beidellite
sepiolite
illite
synthetic_hectorite
cheto
wyoming_montmorillonite
SAz-2
SAz-1
SWy-1
SWy-2
STx-1
hectorite
-600
-400
-200
0
200
400
600
800
-600 -500 -400 -300 -200 -100 0 100 200 300 400 500
t-SN_2
t-SNE_1
Hectorite Top 100 Most Similar Words
with Automatic Filter
100 Most
Similar
Words:
Hectorite
vs
Synthetic
Hectorite
hectorite
montmorillonite
saponite
vermiculite
LAPONITE_®
bentonite
sodium_montmorillonite
cloisite_®_na+
synthetic_hectorite
laponite_R
fluorohectorite
beidellite
taeniolite
kaolinite
wyoming_bentonite
sepiolite
magadiite
synthetic_saponite
laponite
nontronite
h-montmorillonite
XLG
MX80
cheto
rectorite
Kunipia-F
wyoming_montmorillonite
synthetic_hectorite
XLG
laponite
laponite_RD
AlMt
fluorohectorite
synthetic_saponite
montmorillonite
wyoming_montmorillonite
LapO
organically_modified_
montmorillonites
hectorite
cloisite_®_na+
somasif
-100
-80
-60
-40
-20
0
20
40
-80 -60 -40 -20 0 20 40 60 80
t-SNE_2
t-SNE_!
Hectorite (Blue) and Synthetic Hectorite (Red) Top 100 Filtered
Hectorite Synthetic Hectorite
Hectorite – lithium… What do you Get?
Comparison Between the Most Similar Words to Hectorite-lithium Vector and Hectorite.
hectorite-lithium hectorite
montmorillonite 0.542133451 montmorillonite 0.743198991
vermiculite 0.445565403 vermiculite 0.6347211
saponite 0.442161977 saponite 0.665687919
SWy-1 0.436179101 SWy-1 0.603581309
bentonite 0.426019549 bentonite 0.60954994
laponite_RD 0.424249649 laponite_RD 0.594052732
kaolinite 0.416843653 kaolinite 0.585838616
SWy-2 0.415204555 SWy-2 0.603053212
SWy2 0.596270919
synthetic_hectorite 0.406463742 synthetic_hectorite 0.597940624
beidellite 0.390393943 beidellite 0.587989688
cloisite_®_na+ 0.390286058 cloisite_®_na+ 0.602291822
wyoming_bentonite 0.38052845 wyoming_bentonite 0.584869027
Results: Hectorite in
hec2vec
100 Most
Similar
Words to
Hectorite
100 Most
Similar
Words to
Hectorite
(Manually
Filtered)
Hectorite – lithium… What do you Get?
Comparison Between the Most Similar Words to Hectorite-lithium Vector and Hectorite
word hectorite-lithium hectorite
montmorillonite 0.721055269 0.764317989
sepiolite 0.700928926 0.853842497
bentonite 0.69544071 0.685807884
saponite 0.648790061 0.862108946
montmorillonites 0.645610392 0.908462226
kaolin 0.642410934 0.684036136
zeolite 0.628637791 0.800811887
vermiculite 0.619120359 0.754984796
halloysite 0.617966712 0.846212149
attapulgite 0.612860382 0.825950325
beidellite 0.60122323 0.866034865
goethite 0.599569619 0.681477785
palygorskite 0.597968638 0.80305177
talc 0.580389857 0.819097161
kaolinite 0.57166183 0.49003166
rectorite 0.563381553 0.78731674
cloisite 0.546381652 0.679059327
laponite 0.537446022 0.886646152
SWy-1 0.530636072 0.774285376
SWy-2 0.527460277 0.851882219
nontronite 0.526098669 0.817075312
Conclusions
•There is a relation between hectorite and other clay minerals
such as montmorillonite, sepiolite, vermiculite. This is consistent
with Güven (1988) Grew et al. (2019), and Hazen et al. (2015).
•There is a relation between natural hectorite and synthetic
hectorite. In the 100 most similar words:
•Laponite association with hectorite found on both mat2vec and
hec2vec.
•Flourhectorite found on mat2vec.
•This is consistent with Güven (1988).
•Lithium is a key element in hectorite, since eliminating lithium
from hectorite decreases the similarity with the other clay
minerals.
Questions?

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Mining Data for Ore Natural Language Processing to Identify Lithium Minerals in Scientific Literature