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“The PRP and Its Applications”
Panel Presentation
With Tom DeFanti and Frank Wuerthwein
Nautilus and the National Research Platform
CENIC 2022 Annual Conference
September 27, 2022
1
Dr. Larry Smarr
Founding Director Emeritus, California Institute for Telecommunications and Information Technology;
Distinguished Professor Emeritus, Dept. of Computer Science and Engineering
Jacobs School of Engineering, UCSD
http://lsmarr.calit2.net
NSF CC*DNI Grant
$7.3M 10/2015-10/2020
Extended - In Year 7 Now
(GDC)
2015 Vision: The Pacific Research Platform Will Connect Science DMZs
Creating a Regional End-to-End Science-Driven Community Cyberinfrastructure
Source: John Hess, CENIC
Supercomputer
Centers
2015-2022: UCSD Designs PRP Data Transfer Nodes (DTNs) --
Flash I/O Network Appliances (FIONAs)
FIONAs Solved the Disk-to-Disk Data Transfer Problem
at Near Full Speed on Best-Effort 10G, 40G and 100G
FIONAs Designed by UCSD’s Phil Papadopoulos, John Graham,
Joe Keefe, and Tom DeFanti
https://pacificresearchplatform.org/fiona/
Add Up to 8 Nvidia GPUs Per 2U FIONA
To Add Machine Learning Capability
Up to 240TB Storage
Rotating Storage
4000 TB
PRP’s Nautilus is a Multi-Institution Hypercluster
Connected by Optical Networks
160 GPU & Storage FIONAs on 27 Partner Campuses
Networked Together at 10-100Gbps
As of Sept 21, 2022
2018/2019: PRP Game Changer!
Using Google’s Kubernetes to Orchestrate Containers Across the PRP
User
Applications
Clouds
Containers
PRP’s Nautilus Hypercluster Adopted Open-Source Kubernetes and Rook
to Orchestrate Software Containers and Manage Distributed Storage
“Kubernetes with Rook/Ceph Allows Us to Manage Petabytes of
Distributed Storage and GPUs for Data Science,
While We Measure and Monitor Network Use.”
--John Graham, UC San Diego
Nautilus Has Established a Distributed
Set of Ceph Storage Pools
Allows users to select the placement for
compute jobs relative to the storage pools.
PRP forms optimal-scale Ceph pools with
best performance and lowest latency
The PRP Web Site Provides Widely-Used Open-Source Services
For How to Join, Application Research, Development, and Collaboration
Five Major Components of
Nautilus Security
https://fasterdata.es.net/science-dmz/science-dmz-security/
2017-2020: NSF CHASE-CI Grant Adds a Machine Learning Layer
Built on Top of the Pacific Research Platform
Caltech
UCB
UCI UCR
UCSD
UCSC
Stanford
MSU
UCM
SDSU
NSF Grant for High Speed “Cloud” of 256 GPUs
For 30 ML Faculty & Their Students at 10 Campuses
for Training AI Algorithms on Big Data
PI: Larry Smarr, Calit2, UCSD
Co-PIs:
• Tajana Rosing, CSE, UCSD
• Ken Kreutz-Delgado, ECE, UCSD
• Ilkay Altintas, SDSC, UCSD
• Tom DeFanti, QI, UCSD
NSF Has Funded Two Extensions:
CHASE-CI ABR-Smarr PI &
CHASE-CI ENS-DeFanti PI
$2.8M
Original PRP
CENIC/PW Link
2018-2021: Toward the National Research Platform (TNRP) -
Using CENIC & Internet2 to Connect Quilt Regional R&E Networks
“Towards
The NRP”
3-Year Grant
Funded
by NSF
$2.5M
October 2018
Award #1826967
PI Smarr
Co-PIs Altintas
Papadopoulos
Wuerthwein
Rosing
DeFanti
The Open Science Grid (OSG)
Has Been Integrated With the PRP
In aggregate ~ 200,000 Intel x86 cores
used by ~400 projects
Source: Frank Würthwein,
OSG Exec Director; PRP co-PI; UCSD/SDSC OSG Federates ~100 Clusters Worldwide
All OSG User
Communities
Use HTCondor for
Resource Orchestration
SDSC
U.Chicago
FNAL
Caltech
Distributed
OSG Petabyte
Storage Caches
The Open Science Grid Delivers to Over 50 Fields of Science
2.4 Billion Core-Hours Per Year of Distributed High Throughput Computing
NCSA Delivered
~35,000 Core-Hours
Per Year in 1990
https://gracc.opensciencegrid.org/dashboard/db/gracc-home
CMS
ATLAS
More Than 1 Million GPU-Hours
on PRP Used via OSG Integration
Within the Last 2 Years
The New Pacific Research Platform Video
Highlights 3 Different Applications Out of 700 Nautilus Namespace Projects
Pacific Research Platform Video:
https://pacificresearchplatform.org/media/pacific-research-platform-video/
Co-Existence of Interactive and
Non-Interactive Computing on PRP
GPU Simulations Needed to Improve Ice Model.
=> Results in Significant Improvement
in Pointing Resolution for Multi-Messenger Astrophysics
NSF Large-Scale Observatories Are Using PRP and OSG
as a Cohesive, Federated, National-Scale Research Data Infrastructure
NSF’s IceCube & LIGO Both See Nautilus
as Just Another OSG Resource
IceCube Used Up to
300 of PRP’s 500
GPUs in 2021!
2017: PRP 20Gbps Connection of UCSD SunCAVE and UCM WAVE Over CENIC
2018-2019: Added Their 90 GPUs to PRP for Machine Learning Computations
Leveraging UCM Campus Funds and NSF CNS-1456638 & CNS-1730158 at UCSD
UC Merced WAVE (20 Screens, 20 GPUs) UCSD SunCAVE (70 Screens, 70 GPUs)
See These VR Facilities in Action in the PRP Video
NSF-Funded WIFIRE Uses PRP/CENIC to Couple Wireless Edge Sensors
With Supercomputers, Enabling Fire Modeling Workflows
Landscape data
WIFIRE Firemap
Fire Perimeter
Source: Ilkay Altintas, SDSC
Real-Time
Meteorological Sensors
Weather Forecasts
Work Flow
PRP
The PRP Has Emphasized
Expanding Diversity and Inclusion
• When the PRP Grant Was Funded in 2015, It Started With:
– 6 States Now 40 States
– 19 Campuses Now 95 Campuses
– 9 Minority Serving Institutions Now 20 MSIs
– 2 NSF EPCoR States Now 19 EPSCoR States, 2 Territories, and Wash DC
The Pacific Research Platform Is Only Possible
Because of the Prior Existence of CENIC!
https://cenic.org/blog/prp-fulfilling-the-promise-of-collapsing-space-and-time

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The PRP and Its Applications

  • 1. “The PRP and Its Applications” Panel Presentation With Tom DeFanti and Frank Wuerthwein Nautilus and the National Research Platform CENIC 2022 Annual Conference September 27, 2022 1 Dr. Larry Smarr Founding Director Emeritus, California Institute for Telecommunications and Information Technology; Distinguished Professor Emeritus, Dept. of Computer Science and Engineering Jacobs School of Engineering, UCSD http://lsmarr.calit2.net
  • 2. NSF CC*DNI Grant $7.3M 10/2015-10/2020 Extended - In Year 7 Now (GDC) 2015 Vision: The Pacific Research Platform Will Connect Science DMZs Creating a Regional End-to-End Science-Driven Community Cyberinfrastructure Source: John Hess, CENIC Supercomputer Centers
  • 3. 2015-2022: UCSD Designs PRP Data Transfer Nodes (DTNs) -- Flash I/O Network Appliances (FIONAs) FIONAs Solved the Disk-to-Disk Data Transfer Problem at Near Full Speed on Best-Effort 10G, 40G and 100G FIONAs Designed by UCSD’s Phil Papadopoulos, John Graham, Joe Keefe, and Tom DeFanti https://pacificresearchplatform.org/fiona/ Add Up to 8 Nvidia GPUs Per 2U FIONA To Add Machine Learning Capability Up to 240TB Storage
  • 4. Rotating Storage 4000 TB PRP’s Nautilus is a Multi-Institution Hypercluster Connected by Optical Networks 160 GPU & Storage FIONAs on 27 Partner Campuses Networked Together at 10-100Gbps As of Sept 21, 2022
  • 5. 2018/2019: PRP Game Changer! Using Google’s Kubernetes to Orchestrate Containers Across the PRP User Applications Clouds Containers
  • 6. PRP’s Nautilus Hypercluster Adopted Open-Source Kubernetes and Rook to Orchestrate Software Containers and Manage Distributed Storage “Kubernetes with Rook/Ceph Allows Us to Manage Petabytes of Distributed Storage and GPUs for Data Science, While We Measure and Monitor Network Use.” --John Graham, UC San Diego
  • 7. Nautilus Has Established a Distributed Set of Ceph Storage Pools Allows users to select the placement for compute jobs relative to the storage pools. PRP forms optimal-scale Ceph pools with best performance and lowest latency
  • 8. The PRP Web Site Provides Widely-Used Open-Source Services For How to Join, Application Research, Development, and Collaboration
  • 9. Five Major Components of Nautilus Security https://fasterdata.es.net/science-dmz/science-dmz-security/
  • 10. 2017-2020: NSF CHASE-CI Grant Adds a Machine Learning Layer Built on Top of the Pacific Research Platform Caltech UCB UCI UCR UCSD UCSC Stanford MSU UCM SDSU NSF Grant for High Speed “Cloud” of 256 GPUs For 30 ML Faculty & Their Students at 10 Campuses for Training AI Algorithms on Big Data PI: Larry Smarr, Calit2, UCSD Co-PIs: • Tajana Rosing, CSE, UCSD • Ken Kreutz-Delgado, ECE, UCSD • Ilkay Altintas, SDSC, UCSD • Tom DeFanti, QI, UCSD NSF Has Funded Two Extensions: CHASE-CI ABR-Smarr PI & CHASE-CI ENS-DeFanti PI $2.8M
  • 11. Original PRP CENIC/PW Link 2018-2021: Toward the National Research Platform (TNRP) - Using CENIC & Internet2 to Connect Quilt Regional R&E Networks “Towards The NRP” 3-Year Grant Funded by NSF $2.5M October 2018 Award #1826967 PI Smarr Co-PIs Altintas Papadopoulos Wuerthwein Rosing DeFanti
  • 12. The Open Science Grid (OSG) Has Been Integrated With the PRP In aggregate ~ 200,000 Intel x86 cores used by ~400 projects Source: Frank Würthwein, OSG Exec Director; PRP co-PI; UCSD/SDSC OSG Federates ~100 Clusters Worldwide All OSG User Communities Use HTCondor for Resource Orchestration SDSC U.Chicago FNAL Caltech Distributed OSG Petabyte Storage Caches
  • 13. The Open Science Grid Delivers to Over 50 Fields of Science 2.4 Billion Core-Hours Per Year of Distributed High Throughput Computing NCSA Delivered ~35,000 Core-Hours Per Year in 1990 https://gracc.opensciencegrid.org/dashboard/db/gracc-home CMS ATLAS More Than 1 Million GPU-Hours on PRP Used via OSG Integration Within the Last 2 Years
  • 14. The New Pacific Research Platform Video Highlights 3 Different Applications Out of 700 Nautilus Namespace Projects Pacific Research Platform Video: https://pacificresearchplatform.org/media/pacific-research-platform-video/
  • 15. Co-Existence of Interactive and Non-Interactive Computing on PRP GPU Simulations Needed to Improve Ice Model. => Results in Significant Improvement in Pointing Resolution for Multi-Messenger Astrophysics NSF Large-Scale Observatories Are Using PRP and OSG as a Cohesive, Federated, National-Scale Research Data Infrastructure NSF’s IceCube & LIGO Both See Nautilus as Just Another OSG Resource IceCube Used Up to 300 of PRP’s 500 GPUs in 2021!
  • 16. 2017: PRP 20Gbps Connection of UCSD SunCAVE and UCM WAVE Over CENIC 2018-2019: Added Their 90 GPUs to PRP for Machine Learning Computations Leveraging UCM Campus Funds and NSF CNS-1456638 & CNS-1730158 at UCSD UC Merced WAVE (20 Screens, 20 GPUs) UCSD SunCAVE (70 Screens, 70 GPUs) See These VR Facilities in Action in the PRP Video
  • 17. NSF-Funded WIFIRE Uses PRP/CENIC to Couple Wireless Edge Sensors With Supercomputers, Enabling Fire Modeling Workflows Landscape data WIFIRE Firemap Fire Perimeter Source: Ilkay Altintas, SDSC Real-Time Meteorological Sensors Weather Forecasts Work Flow PRP
  • 18. The PRP Has Emphasized Expanding Diversity and Inclusion • When the PRP Grant Was Funded in 2015, It Started With: – 6 States Now 40 States – 19 Campuses Now 95 Campuses – 9 Minority Serving Institutions Now 20 MSIs – 2 NSF EPCoR States Now 19 EPSCoR States, 2 Territories, and Wash DC
  • 19. The Pacific Research Platform Is Only Possible Because of the Prior Existence of CENIC! https://cenic.org/blog/prp-fulfilling-the-promise-of-collapsing-space-and-time