The study characterized 270 MRSA isolates from Colombia to determine molecular epidemiology and virulence genes. PFGE analysis identified dominant clones related to the Chilean and USA300-0114 clones. MLST found sequence types ST1110 and ST1111 related to known clones. SCCmec typing showed types I, II, IVa-c. Virulence genes like enterotoxins, exfoliative toxins, and adhesins were present. Mortality was higher for HA-MRSA and infections like bacteremia. The presence of certain genes was associated with increased severity and pathology.
This study analyzed blood cultures from neonatal intensive care unit patients from 1997 to 2001 in Tripoli Medical Center, Libya. A total of 1431 blood culture sets from 1092 patients were positive for bacterial growth in 801 sets, representing 648 cases of neonatal bacteraemia. The most common causative agents were members of the Enterobacteriaceae family including Serratia, Klebsiella, and Enterobacter species as well as coagulase-negative and positive Staphylococci. Antibiotic susceptibility testing found high levels of resistance among the most frequent pathogens, though resistance to newer antibiotics like aztreonam and imipenem was less common. Resistance in Staphylococcus to anti-stap
Yeasts such as Candida are common causes of bloodstream infections in ICU patients. Candida infections in the ICU have a high mortality rate of 15-25% and are the 4th most common cause of hospital-acquired bloodstream infections. Diagnosis can be challenging due to low sensitivity of blood cultures, but newer tests such as PCR, antigen detection assays, and MALDI-TOF mass spectrometry provide more rapid detection of Candida compared to standard culture methods. The presence of risk factors such as abdominal surgery, central venous catheters, antibiotics use, and prolonged ICU stay increase the risk of developing Candida bloodstream infections in critically ill patients.
Clinical Mycology U F Medical Students 12 05 07 Final2raj kumar
The document discusses several key points about fungal infections:
1) Fungi are common in nature but relatively few cause disease in humans, usually superficial infections or allergies. Major disease-causing fungi include Candida, Aspergillus, and Zygomycetes.
2) Risk factors for invasive fungal infections include surgery, immunosuppression, and broad-spectrum antibiotic use. Candida infections are the most common cause of healthcare-associated bloodstream infections.
3) Early diagnosis and treatment of invasive fungal infections is important, as mortality can be high. Removing intravascular catheters and restoring immune function are also important aspects of management.
This document discusses Candida infections in the ICU, including epidemiology, risk factors, pathogenesis, diagnosis, and treatment. Some key points:
- Candida species are the most common fungal pathogens in hospitals and ICUs, responsible for 17% of healthcare-associated infections. Non-albicans Candida species now account for around 50% of infections.
- Risk factors for invasive Candida infections include prolonged ICU stay, broad-spectrum antibiotic use, surgery, and underlying conditions like diabetes that impair immunity. Heavy Candida colonization is an independent risk factor.
- Diagnosis is challenging as symptoms mimic bacterial infections. Culture-based methods are slow. Biomarkers like beta-D-
This document reports a case of Saccharomyces cerevisiae fungemia in an 8-month-old baby receiving chemotherapy for acute myeloid leukemia. The patient was receiving Saccharomyces boulardii capsules as prophylaxis against diarrhea when a strain of S. cerevisiae was isolated from their blood culture. While S. boulardii and S. cerevisiae are difficult to distinguish, this case raises concerns about potential infectious risks from biotherapeutic agents in immunocompromised patients. The patient recovered after treatment with amphotericin-B and removal of their central venous catheter.
Fungal infections caused by Candida and Aspergillus species are increasingly common in critically ill patients. These infections are associated with high morbidity and mortality. Clinicians must have a high index of suspicion given the challenges of diagnosis in ICU patients. Treatment is complicated by potential adverse drug reactions and interactions.
Incidence rate of multidrug-resistant organisms in a tertiary care hospital, ...Apollo Hospitals
Antimicrobial resistance to microorganisms is a growing public health concern globally, especially in developing countries. This study was conducted to study the incidence rate of multidrug-resistant organisms with their antibiotic sensitivity pattern.
This study analyzed blood cultures from neonatal intensive care unit patients from 1997 to 2001 in Tripoli Medical Center, Libya. A total of 1431 blood culture sets from 1092 patients were positive for bacterial growth in 801 sets, representing 648 cases of neonatal bacteraemia. The most common causative agents were members of the Enterobacteriaceae family including Serratia, Klebsiella, and Enterobacter species as well as coagulase-negative and positive Staphylococci. Antibiotic susceptibility testing found high levels of resistance among the most frequent pathogens, though resistance to newer antibiotics like aztreonam and imipenem was less common. Resistance in Staphylococcus to anti-stap
Yeasts such as Candida are common causes of bloodstream infections in ICU patients. Candida infections in the ICU have a high mortality rate of 15-25% and are the 4th most common cause of hospital-acquired bloodstream infections. Diagnosis can be challenging due to low sensitivity of blood cultures, but newer tests such as PCR, antigen detection assays, and MALDI-TOF mass spectrometry provide more rapid detection of Candida compared to standard culture methods. The presence of risk factors such as abdominal surgery, central venous catheters, antibiotics use, and prolonged ICU stay increase the risk of developing Candida bloodstream infections in critically ill patients.
Clinical Mycology U F Medical Students 12 05 07 Final2raj kumar
The document discusses several key points about fungal infections:
1) Fungi are common in nature but relatively few cause disease in humans, usually superficial infections or allergies. Major disease-causing fungi include Candida, Aspergillus, and Zygomycetes.
2) Risk factors for invasive fungal infections include surgery, immunosuppression, and broad-spectrum antibiotic use. Candida infections are the most common cause of healthcare-associated bloodstream infections.
3) Early diagnosis and treatment of invasive fungal infections is important, as mortality can be high. Removing intravascular catheters and restoring immune function are also important aspects of management.
This document discusses Candida infections in the ICU, including epidemiology, risk factors, pathogenesis, diagnosis, and treatment. Some key points:
- Candida species are the most common fungal pathogens in hospitals and ICUs, responsible for 17% of healthcare-associated infections. Non-albicans Candida species now account for around 50% of infections.
- Risk factors for invasive Candida infections include prolonged ICU stay, broad-spectrum antibiotic use, surgery, and underlying conditions like diabetes that impair immunity. Heavy Candida colonization is an independent risk factor.
- Diagnosis is challenging as symptoms mimic bacterial infections. Culture-based methods are slow. Biomarkers like beta-D-
This document reports a case of Saccharomyces cerevisiae fungemia in an 8-month-old baby receiving chemotherapy for acute myeloid leukemia. The patient was receiving Saccharomyces boulardii capsules as prophylaxis against diarrhea when a strain of S. cerevisiae was isolated from their blood culture. While S. boulardii and S. cerevisiae are difficult to distinguish, this case raises concerns about potential infectious risks from biotherapeutic agents in immunocompromised patients. The patient recovered after treatment with amphotericin-B and removal of their central venous catheter.
Fungal infections caused by Candida and Aspergillus species are increasingly common in critically ill patients. These infections are associated with high morbidity and mortality. Clinicians must have a high index of suspicion given the challenges of diagnosis in ICU patients. Treatment is complicated by potential adverse drug reactions and interactions.
Incidence rate of multidrug-resistant organisms in a tertiary care hospital, ...Apollo Hospitals
Antimicrobial resistance to microorganisms is a growing public health concern globally, especially in developing countries. This study was conducted to study the incidence rate of multidrug-resistant organisms with their antibiotic sensitivity pattern.
This document discusses next generation sequencing to identify bacteria, fungi, and viruses from patient samples. It summarizes discussions and presentations from several ear, nose, and throat doctors and researchers on using DNA sequencing to diagnose biofilm infections. DNA sequencing was able to identify more pathogens than traditional cultures and provided faster results. Identifying biofilms is important as they are resistant to antibiotics and cause chronic infections. The document promotes using a molecular diagnostic test from PathoGenius to identify pathogens in patient samples, which it says provides faster, more comprehensive results than cultures and is covered by Medicare.
Antifungal Strategies in the Intensive Care UnitsYazan Kherallah
Discuss the different anti-fungal treatment strategies for suspected systemic candidiasis in the intensive care units: prophylaxis, preemptive, empiric and definitive.
Evaluation of resistance profile of pseudomonas aeruginosa with reference to ...iosrjce
This study evaluated the resistance profile and biofilm production of 112 Pseudomonas aeruginosa isolates from clinical samples. It found:
1) Isolates exhibited high resistance to ciprofloxacin (50.89%), ceftazidime (38.39%), and ceftriaxone (34.82%), but all isolates were susceptible to imipenem.
2) 48 isolates were biofilm producers, most commonly from pus and sputum samples. Biofilm producers showed significantly higher resistance to several antibiotics compared to non-producers.
3) 17 isolates were multi-drug resistant, and most (12/17) were biofilm producers. Biofilm production was significantly associated with multi-drug resistance.
The document discusses the prevalence and incidence of invasive fungal infections in Nigeria, finding rates of 5-12% for various fungi like Candida and Cryptococcus in various studies. It notes that invasive fungal infections have increased globally in recent decades and are often identified post-mortem rather than pre-mortem. Major risk factors for invasive fungal infections include neutropenia, use of antibiotics, immunosuppression, and prolonged ICU stays.
Fungal infections in hematology patients: advances in prophylaxis and treatmentspa718
This document summarizes advances in prophylaxis and treatment of fungal infections in hematology patients. It discusses risk stratification approaches and various randomized controlled trials comparing different antifungal agents for prophylaxis. Trials showed posaconazole, micafungin, and voriconazole reduced incidence of invasive fungal infections compared to fluconazole or itraconazole in high-risk patients. The document also reviews empirical antifungal therapy approaches and measures of success in clinical trials comparing liposomal amphotericin B, voriconazole, and caspofungin.
Common variable immunodeficiency (CVID) is characterized by hypogammaglobulinemia, poor response to vaccination, and increased susceptibility to infection. It is the most common symptomatic antibody deficiency disorder. The pathogenesis of CVID involves defects in B cell differentiation and antibody production that can be caused by genetic mutations affecting surface molecules, cytosolic proteins, or nuclear factors involved in B cell development and antibody class switching. While most cases of CVID are sporadic, about 5-25% show familial inheritance in an autosomal dominant pattern.
This research article describes a novel method using high-density peptide microarrays and computational analysis to identify B-cell epitopes in patients with celiac disease. Overlapping peptide sequences from native and deamidated gliadin proteins were synthesized onto silicon wafers. Serum samples from celiac patients and controls were tested on the microarrays. Computational analysis identified distinct epitope sets that differentiated celiac patients from controls with high accuracy. The identified epitopes have potential for developing improved diagnostic tests for celiac disease.
- The document discusses chronic granulomatous disease (CGD), an immunodeficiency caused by a defect in the NADPH oxidase complex resulting in recurrent infections.
- It covers the genetics, clinical presentation including infections by bacteria, fungi and mycobacteria, diagnostic testing such as NBT and DHR, and management including antimicrobial prophylaxis and IFN-γ therapy.
- Mendelian susceptibility to mycobacterial disease is also discussed, which is caused by defects in IFN-γ signaling and results in selective predisposition to mycobacterial infections despite otherwise normal health. Causative genes involved in IFN-γ production and response are identified.
Advanced Next Generation DNA sequencing can more accurately diagnose infections by identifying bacteria, fungi, and viruses compared to traditional culture techniques. This allows for better treatment decisions. PathoGenius Laboratory uses Next Generation Sequencing to identify microbes in samples, providing physicians with diagnostic results to inform customized treatment. Previous methods of relying only on culture were found to significantly underrepresent the microbes present. Molecular diagnostic techniques provide more comprehensive information about biofilms and chronic infections compared to traditional approaches.
Cefditoren pivoxil:a new antibiotic for the treatment of respiratory infectionsJordi Roig
Cefditoren pivoxil is a new oral cephalosporin antibiotic for the treatment of respiratory tract infections. It has high in vitro activity against common respiratory pathogens like Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis. Clinical trials showed that cefditoren was as effective as other antibiotics like amoxicillin-clavulanate, cefuroxime, and clarithromycin in treating conditions like acute otitis media, acute sinusitis, acute pharyngotonsillitis, and acute exacerbations of chronic bronchitis. Cefditoren demonstrated bactericidal activity against penicillin-resistant S. pneumoniae strains
The study analyzed blood samples from 68 cancer patients in Iran to identify the presence and species of Candida infecting the patients and determine the resistance pattern to Amphotericin B. PCR testing identified Candida in 5 samples, with 2 samples containing C. albicans and 3 containing non-albicans Candida species. The non-albicans species showed high resistance to Amphotericin B. The results demonstrate that non-albicans Candida is a common infection in cancer patients in Iran and shows resistance to antifungal drugs.
This document discusses treatment options for Legionnaires' disease, including macrolides versus fluoroquinolones. It summarizes several studies comparing these drug classes and finds azithromycin and levofloxacin to be equally effective with shorter treatment duration for fluoroquinolones. Severe Legionnaires' disease is associated with higher mortality, especially if initial appropriate treatment is delayed or inadequate. Prognostic factors for death include an APACHE score over 15, shock, immunosuppression, and acute renal failure.
The document discusses invasive fungal infections in critically ill patients. It notes that these infections have increased due to factors like immunosuppression from medical therapies. Common fungal pathogens include Candida species and Aspergillus. Diagnosis can be challenging as cultures often have low sensitivity. Biomarkers like galactomannan and beta-D-glucan can help but have limitations. Early treatment with antifungals is important to reduce mortality, though choice of agent depends on individual patient and infecting organism factors. Fungal infections should be considered in critically ill patients with persistent fever despite antibiotics.
This study characterized carbapenem-resistant Acinetobacter baumannii (CNSAb) isolates collected from burn patients at a hospital in Tehran, Iran. Of the 92 A. baumannii isolates tested, 69 were confirmed to be CNSAb based on imipenem resistance. Antibiotic susceptibility testing found high resistance rates to multiple classes of antibiotics. Molecular analysis identified several beta-lactamase genes conferring resistance. Most isolates belonged to international clones and sequence types previously seen worldwide. Genetic analysis using multiple methods found diversity but also the presence of dominant strains. The study provides information on the antibiotic resistance and genetic characteristics of CNSAb in Iranian burn patients.
Dr. José Antonio Ortega Martell presented on allergic rhinitis (AR) and the role of intranasal corticosteroids (INS) in its treatment. AR is a common condition worldwide that can impair quality of life. While symptoms can be relieved by various medications, INS are the most effective treatment due to their ability to reduce inflammation and prevent exacerbations. INS work both acutely and prevent persistent minimal inflammation. Potential side effects are typically minor and can be reduced by proper administration. INS should be used as the preferred treatment for AR due to their efficacy and ability to alter the disease course over time.
This document discusses factors related to the treatment of community-acquired pneumonia (CAP). It notes that Streptococcus pneumoniae is the leading cause of CAP and risk factors for infection include age over 65, comorbidities, and recent antibiotic use. Mortality is higher in CAP patients with COPD, septic shock, or inappropriate initial antibiotic treatment. Early administration of antibiotics within 4 hours is associated with lower mortality. Combination antibiotic therapy is more effective than monotherapy for pneumococcal bacteremia.
Activation-of-human-immunodeficiency-virus-type-1-expression-by-Gardnerella-v...Farhad B. Hashemi, PhD
This study found that lysates from Gardnerella vaginalis, a bacteria commonly associated with bacterial vaginosis, significantly stimulated HIV expression in monocytoid cells and certain T cell lines. G. vaginalis lysates activated HIV long terminal repeat transcription and increased NF-kB binding activity in HIV-infected cells, indicating an effect on HIV transcription. The activation of HIV production by G. vaginalis suggests that G. vaginalis infection in the genital tract may increase the risk of HIV transmission by enhancing HIV expression levels in the genital tract. This could help explain the link between bacterial vaginosis and increased sexual transmission of HIV.
The document discusses principles of treating infectious illnesses in critical care, with a focus on antibiotic resistance and choice of antibiotics. It covers several topics: the impact of antibiotic use on resistance; choosing initial antibiotics and tailoring treatment based on culture results; applying pharmacology and pharmacodynamics to optimize bacterial killing; and reviewing guidelines for specific infections. It also provides an overview of antibiotic classes, mechanisms of action, considerations for dosing in renal impairment, and highlights specific agents like penicillins, cephalosporins, and vancomycin.
This study analyzed 321 infections caused by extended-spectrum beta-lactamase (ESBL)-producing bacteria at a hospital in Rhode Island from 2006-2011. The number of such infections increased each year. While Klebsiella pneumoniae was previously dominant, there was a shift to Escherichia coli as the predominant organism. Resistance to common oral antibiotics was high. A comparison with studies in Pakistan found similar high resistance levels in ESBL-producing E. coli isolates from hospitalized patients in Islamabad and Peshawar.
This document discusses next generation sequencing to identify bacteria, fungi, and viruses from patient samples. It summarizes discussions and presentations from several ear, nose, and throat doctors and researchers on using DNA sequencing to diagnose biofilm infections. DNA sequencing was able to identify more pathogens than traditional cultures and provided faster results. Identifying biofilms is important as they are resistant to antibiotics and cause chronic infections. The document promotes using a molecular diagnostic test from PathoGenius to identify pathogens in patient samples, which it says provides faster, more comprehensive results than cultures and is covered by Medicare.
Antifungal Strategies in the Intensive Care UnitsYazan Kherallah
Discuss the different anti-fungal treatment strategies for suspected systemic candidiasis in the intensive care units: prophylaxis, preemptive, empiric and definitive.
Evaluation of resistance profile of pseudomonas aeruginosa with reference to ...iosrjce
This study evaluated the resistance profile and biofilm production of 112 Pseudomonas aeruginosa isolates from clinical samples. It found:
1) Isolates exhibited high resistance to ciprofloxacin (50.89%), ceftazidime (38.39%), and ceftriaxone (34.82%), but all isolates were susceptible to imipenem.
2) 48 isolates were biofilm producers, most commonly from pus and sputum samples. Biofilm producers showed significantly higher resistance to several antibiotics compared to non-producers.
3) 17 isolates were multi-drug resistant, and most (12/17) were biofilm producers. Biofilm production was significantly associated with multi-drug resistance.
The document discusses the prevalence and incidence of invasive fungal infections in Nigeria, finding rates of 5-12% for various fungi like Candida and Cryptococcus in various studies. It notes that invasive fungal infections have increased globally in recent decades and are often identified post-mortem rather than pre-mortem. Major risk factors for invasive fungal infections include neutropenia, use of antibiotics, immunosuppression, and prolonged ICU stays.
Fungal infections in hematology patients: advances in prophylaxis and treatmentspa718
This document summarizes advances in prophylaxis and treatment of fungal infections in hematology patients. It discusses risk stratification approaches and various randomized controlled trials comparing different antifungal agents for prophylaxis. Trials showed posaconazole, micafungin, and voriconazole reduced incidence of invasive fungal infections compared to fluconazole or itraconazole in high-risk patients. The document also reviews empirical antifungal therapy approaches and measures of success in clinical trials comparing liposomal amphotericin B, voriconazole, and caspofungin.
Common variable immunodeficiency (CVID) is characterized by hypogammaglobulinemia, poor response to vaccination, and increased susceptibility to infection. It is the most common symptomatic antibody deficiency disorder. The pathogenesis of CVID involves defects in B cell differentiation and antibody production that can be caused by genetic mutations affecting surface molecules, cytosolic proteins, or nuclear factors involved in B cell development and antibody class switching. While most cases of CVID are sporadic, about 5-25% show familial inheritance in an autosomal dominant pattern.
This research article describes a novel method using high-density peptide microarrays and computational analysis to identify B-cell epitopes in patients with celiac disease. Overlapping peptide sequences from native and deamidated gliadin proteins were synthesized onto silicon wafers. Serum samples from celiac patients and controls were tested on the microarrays. Computational analysis identified distinct epitope sets that differentiated celiac patients from controls with high accuracy. The identified epitopes have potential for developing improved diagnostic tests for celiac disease.
- The document discusses chronic granulomatous disease (CGD), an immunodeficiency caused by a defect in the NADPH oxidase complex resulting in recurrent infections.
- It covers the genetics, clinical presentation including infections by bacteria, fungi and mycobacteria, diagnostic testing such as NBT and DHR, and management including antimicrobial prophylaxis and IFN-γ therapy.
- Mendelian susceptibility to mycobacterial disease is also discussed, which is caused by defects in IFN-γ signaling and results in selective predisposition to mycobacterial infections despite otherwise normal health. Causative genes involved in IFN-γ production and response are identified.
Advanced Next Generation DNA sequencing can more accurately diagnose infections by identifying bacteria, fungi, and viruses compared to traditional culture techniques. This allows for better treatment decisions. PathoGenius Laboratory uses Next Generation Sequencing to identify microbes in samples, providing physicians with diagnostic results to inform customized treatment. Previous methods of relying only on culture were found to significantly underrepresent the microbes present. Molecular diagnostic techniques provide more comprehensive information about biofilms and chronic infections compared to traditional approaches.
Cefditoren pivoxil:a new antibiotic for the treatment of respiratory infectionsJordi Roig
Cefditoren pivoxil is a new oral cephalosporin antibiotic for the treatment of respiratory tract infections. It has high in vitro activity against common respiratory pathogens like Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis. Clinical trials showed that cefditoren was as effective as other antibiotics like amoxicillin-clavulanate, cefuroxime, and clarithromycin in treating conditions like acute otitis media, acute sinusitis, acute pharyngotonsillitis, and acute exacerbations of chronic bronchitis. Cefditoren demonstrated bactericidal activity against penicillin-resistant S. pneumoniae strains
The study analyzed blood samples from 68 cancer patients in Iran to identify the presence and species of Candida infecting the patients and determine the resistance pattern to Amphotericin B. PCR testing identified Candida in 5 samples, with 2 samples containing C. albicans and 3 containing non-albicans Candida species. The non-albicans species showed high resistance to Amphotericin B. The results demonstrate that non-albicans Candida is a common infection in cancer patients in Iran and shows resistance to antifungal drugs.
This document discusses treatment options for Legionnaires' disease, including macrolides versus fluoroquinolones. It summarizes several studies comparing these drug classes and finds azithromycin and levofloxacin to be equally effective with shorter treatment duration for fluoroquinolones. Severe Legionnaires' disease is associated with higher mortality, especially if initial appropriate treatment is delayed or inadequate. Prognostic factors for death include an APACHE score over 15, shock, immunosuppression, and acute renal failure.
The document discusses invasive fungal infections in critically ill patients. It notes that these infections have increased due to factors like immunosuppression from medical therapies. Common fungal pathogens include Candida species and Aspergillus. Diagnosis can be challenging as cultures often have low sensitivity. Biomarkers like galactomannan and beta-D-glucan can help but have limitations. Early treatment with antifungals is important to reduce mortality, though choice of agent depends on individual patient and infecting organism factors. Fungal infections should be considered in critically ill patients with persistent fever despite antibiotics.
This study characterized carbapenem-resistant Acinetobacter baumannii (CNSAb) isolates collected from burn patients at a hospital in Tehran, Iran. Of the 92 A. baumannii isolates tested, 69 were confirmed to be CNSAb based on imipenem resistance. Antibiotic susceptibility testing found high resistance rates to multiple classes of antibiotics. Molecular analysis identified several beta-lactamase genes conferring resistance. Most isolates belonged to international clones and sequence types previously seen worldwide. Genetic analysis using multiple methods found diversity but also the presence of dominant strains. The study provides information on the antibiotic resistance and genetic characteristics of CNSAb in Iranian burn patients.
Dr. José Antonio Ortega Martell presented on allergic rhinitis (AR) and the role of intranasal corticosteroids (INS) in its treatment. AR is a common condition worldwide that can impair quality of life. While symptoms can be relieved by various medications, INS are the most effective treatment due to their ability to reduce inflammation and prevent exacerbations. INS work both acutely and prevent persistent minimal inflammation. Potential side effects are typically minor and can be reduced by proper administration. INS should be used as the preferred treatment for AR due to their efficacy and ability to alter the disease course over time.
This document discusses factors related to the treatment of community-acquired pneumonia (CAP). It notes that Streptococcus pneumoniae is the leading cause of CAP and risk factors for infection include age over 65, comorbidities, and recent antibiotic use. Mortality is higher in CAP patients with COPD, septic shock, or inappropriate initial antibiotic treatment. Early administration of antibiotics within 4 hours is associated with lower mortality. Combination antibiotic therapy is more effective than monotherapy for pneumococcal bacteremia.
Activation-of-human-immunodeficiency-virus-type-1-expression-by-Gardnerella-v...Farhad B. Hashemi, PhD
This study found that lysates from Gardnerella vaginalis, a bacteria commonly associated with bacterial vaginosis, significantly stimulated HIV expression in monocytoid cells and certain T cell lines. G. vaginalis lysates activated HIV long terminal repeat transcription and increased NF-kB binding activity in HIV-infected cells, indicating an effect on HIV transcription. The activation of HIV production by G. vaginalis suggests that G. vaginalis infection in the genital tract may increase the risk of HIV transmission by enhancing HIV expression levels in the genital tract. This could help explain the link between bacterial vaginosis and increased sexual transmission of HIV.
The document discusses principles of treating infectious illnesses in critical care, with a focus on antibiotic resistance and choice of antibiotics. It covers several topics: the impact of antibiotic use on resistance; choosing initial antibiotics and tailoring treatment based on culture results; applying pharmacology and pharmacodynamics to optimize bacterial killing; and reviewing guidelines for specific infections. It also provides an overview of antibiotic classes, mechanisms of action, considerations for dosing in renal impairment, and highlights specific agents like penicillins, cephalosporins, and vancomycin.
This study analyzed 321 infections caused by extended-spectrum beta-lactamase (ESBL)-producing bacteria at a hospital in Rhode Island from 2006-2011. The number of such infections increased each year. While Klebsiella pneumoniae was previously dominant, there was a shift to Escherichia coli as the predominant organism. Resistance to common oral antibiotics was high. A comparison with studies in Pakistan found similar high resistance levels in ESBL-producing E. coli isolates from hospitalized patients in Islamabad and Peshawar.
Molecular biomarkers can be used for several purposes in infectious disease research and clinical practice. These include detecting pathogens, measuring antibody responses, identifying markers of virulence, resistance, and disease severity, and understanding human immune responses and genetic susceptibility. Challenges include lack of sensitivity, mobile genetic elements, and changes in RNA sequences. Whole genome sequencing allows investigation of microbial phylogeny, evolution, and virulence factors.
This document discusses the role of physician attire, such as white coats, in the transmission of pathogens in healthcare settings. It summarizes evidence that white coats and other articles of clothing, like neckties, can become contaminated with pathogens like MRSA and C. difficile. While removing white coats has not been definitively proven to reduce infection rates, there is biological plausibility that contaminated clothing can transmit pathogens between patients. The document concludes that given the potential benefits and lack of risks, changing attire policies to "bare below the elbows" is a reasonable precautionary measure.
This study analyzed 200 pus samples to determine the incidence of methicillin-resistant Staphylococcus aureus (MRSA) and associated risk factors. 80 samples were found to contain S. aureus, of which 29 tested positive for the mecA gene, confirming MRSA. Testing methods like cefoxitin disk diffusion and oxacillin screen agar were compared to the PCR gold standard. The cefoxitin test showed 96.55% sensitivity and 96.22% specificity for detecting MRSA, outperforming oxacillin tests. Risk factors like hospital acquisition, diabetes, and sex were also analyzed. The study concludes that cefoxitin testing is an effective alternative to PCR for MRSA detection
Antibiotics in the management of chronic periodontitis.pptmalti19
This document summarizes evidence on the use of adjunctive antibiotics for chronic periodontitis. A systematic review of 25 studies found some additional benefits of antibiotics in deep pockets, including 0.2-0.6 mm more attachment gain and 0.2-0.8 mm more probing depth reduction. However, the clinical relevance is uncertain given limitations in defining chronic periodontitis and its microbiota. Overall, current studies have not conclusively established benefits of adjunctive antibiotics, so they cannot be routinely indicated as adjuncts for chronic periodontitis.
This document outlines Patient Safety Goal 4 to tackle antimicrobial resistance as part of WHO's 3rd Global Patient Safety Challenge. It describes 3 indicators to monitor the incidence of MRSA, ESBL-Klebsiella Pneumoniae, and ESBL-E.coli infections. Data on newly identified multidrug resistant organism cases will be collected and the infection rates calculated monthly. Strategies like implementing antibiotic guidelines, stewardship programs, and national campaigns aim to optimize antibiotic use and contain the spread of antimicrobial resistance.
The document discusses treatment of invasive fungal infections. It begins by defining invasive fungal infections and describing the epidemiology. Common fungi that cause invasive infections include Aspergillus and Candida. Risk factors include prolonged neutropenia from chemotherapy or hematopoietic stem cell transplants. Available antifungal drug classes are discussed along with their mechanisms of action including azoles, polyenes, and echinocandins. Treatment recommendations from clinical guidelines are summarized for conditions like candidemia and invasive aspergillosis.
This document provides information about Staphylococcus aureus (staph), including methicillin-sensitive Staph aureus (MSSA) and methicillin-resistant Staph aureus (MRSA). It discusses the emergence of antibiotic resistance in staph over time, risk factors for MRSA infection, differences between community-acquired and healthcare-associated MRSA, and treatment approaches for soft tissue infections.
This study explores the association between MRSA and immune evasion cluster (IEC) genes in cancer and non-cancer patients. Genomic DNA was extracted from S. aureus isolates and tested for antibiotic resistance and the presence of IEC genes using PCR and gel electrophoresis. The results found no association between MRSA and patient age/sex. Certain IEC genes like sea were more prevalent in cancer patients. Both cancer and non-cancer MRSA isolates showed resistance to multiple antibiotic classes and carried the mecA gene. Phage typing identified 8 IEC genetic variants with types A and B predominating. The study analyzed how IEC genes may impact MRSA resistance in cancer patients.
This study explores the association between MRSA and immune evasion cluster genes in cancer and non-cancer patients. Genomic DNA was extracted from S. aureus isolates and tested for antibiotic resistance and the presence of specific genes. The results showed that all isolates contained the escien gene, while the distribution of other genes like pvl, chp, and sak were similar between cancer and non-cancer patients. The sea gene was more associated with cancer patients. Eight distinct genetic variants were identified by phage typing. The conclusions state that molecular analysis of genes helps understand resistance development and considering new therapies based on the association of cancer with immune evasion genes in MRSA.
Dr. Kurt Stevenson - Antimicrobial Resistance Surveillance and Management in ...John Blue
This document summarizes antimicrobial resistance surveillance in hospitals and communities. It discusses the increasing issues of antibiotic resistance over time, with predictions from 1966 that bacterial diseases would be eliminated by 2000 proving inaccurate. The document outlines various multidrug resistant organisms of concern, including MRSA, and the need to track resistance patterns and transmission. It presents a case study describing the identification of the ST-239 strain of MRSA in a surveillance program, which was previously uncommon in the US. Overall it emphasizes the growing challenges of antimicrobial resistance for treatment of infections.
Current Issues in Foodborne Illness Caused by Staphylococcus aureusdedmark
Presented at 2013 Arkansas Association for Food Protection annual conference.
Mark E. Hart, Ph.D.
Division of Microbiology
National Center for Toxicological Research
Food and Drug Administration
Nosocomial infections, also known as hospital-acquired infections, are infections that patients acquire during the course of receiving treatment for other conditions within a healthcare setting. The document discusses the epidemiology, sources, common microorganisms, types of infections, diagnosis, treatment and prevention of nosocomial infections. It notes that approximately 2 million patients suffer from hospital-acquired infections annually worldwide, with around 100,000 deaths. Common types of nosocomial infections mentioned include urinary tract infections, respiratory infections, surgical site infections, ventilator-associated pneumonia, and septicemia. Prevention strategies focus on proper hand hygiene, limiting unnecessary procedures and devices, and following infection control protocols.
This document summarizes the pathophysiology of toxic shock syndrome caused by gram-positive bacteria such as Staphylococcus aureus and Streptococcus pyogenes. It explains that toxic shock syndrome results from bacterial toxins called superantigens that activate up to 30% of host T cells by binding simultaneously to the T-cell receptor and MHC class II molecule. This bypass of normal antigen processing triggers a "cytokine avalanche" of excessive T-cell activation and cytokine release that causes tissue damage and multi-organ failure. Early identification, source control with antimicrobials that suppress toxin production like clindamycin and linezolid, and intravenous immunoglobulin administration may help mitigate the immune response and improve outcomes from this
This document summarizes a study on multidrug resistant organisms and their antibiotic resistance patterns among intensive care unit patients in Surat City, India. The study found that Pseudomonas aeruginosa and Klebsiella species were the most common causes of healthcare-associated infections. It also found high resistance of these organisms to cephalosporins but that amikacin and imipenem were the most effective antibiotics. Regular monitoring of resistance patterns was deemed important for guiding empirical treatment of infections in ICU patients.
A study of antibiotic resistance of Extended-Spectrum Beta-Lactamases produci...Premier Publishers
This study investigated antibiotic resistance of Extended-Spectrum Beta-Lactamases (ESBLs) producing Enterobacteriaceae isolated at the University Hospital of Befelatanana in Madagascar. The study found 73 ESBL producing isolates over 6 months, representing 6.3% of total bacteria cultured. The most common ESBL species were Klebsiella spp (34.2%), E. coli (32.9%), and Enterobacter spp (30.1%). All isolates were resistant to amoxicillin, amoxicillin-clavulanic acid, and 3rd generation cephalosporins. Resistance to other antibiotics ranged from 0% to over 75%. Patients under
This document provides an overview of oropharyngeal candidiasis including its etiology, epidemiology, clinical manifestations, diagnosis, and treatment. Key points include: Candida albicans is the most common cause, infecting 45-65% of children and 52% of adults. Risk factors include diabetes, immunosuppression, antibiotics, and xerostomia. Clinical presentations include pseudomembranous, erythematous, and hyperplastic lesions. Diagnosis involves microscopy, culture, and histology. Treatment involves topical or systemic antifungals like nystatin, fluconazole, or echinocandins depending on severity. Prevention emphasizes managing predisposing factors and good oral
The study found a high prevalence of multi-drug resistant Streptococcus pneumoniae (MDR-SP) among healthy children in Thailand. Nasal swabs were collected from 237 children across different age groups and districts. 16% of children were found to carry S. pneumoniae. Isolates showed high rates of resistance to commonly used antibiotics. Genetic analysis found diversity among the strains, indicating horizontal gene transfer. The misuse of antibiotics is contributing to the rise of MDR bacteria by promoting horizontal gene transfer of resistance genes. This poses a significant health threat, particularly to children, as effective treatments are compromised.
4. INTRODUCTION
Staphylococcus From the Greck sthapylé meaning bunch of grapes
Gram Positive Bacteria
Facultative bacteria growth: growing in aerobic
and anaerobic enviroments
Microorganims in the skin and mucous of
humans and animals
Cell wall: pollysaccharide capsule to protect from
phagocytosis
Secreat liquid with monosaccharides, proteins and
peptides: to increase their bond sterenght
5. Aureus Facultative anaerobic bacteria
Gram Positive Bacteria
Produce diseases like
Main cause of nosocomial infections: passing
easily into the bloodstream
Pollysaccharide cell envelope: increase adhesion
capacity, prevents recognition, reinforces it´s
antiphagocytic effect
INTRODUCTION
Benign skin infections:
folliculitis
Benign mucosal
infections: conjunctivitis
Life threatening
diseases:
ostomyelitis, meningitis
, sepsis, pneumonia
8. INTRODUCTION
Virulence factors
Structural components
Virulence factors Action
Capsule Inhibits chemotaxis and phagocytosis
Extracelular
pollysaccharides
Facilites adhesion
Peptidoglycan Stimulates cell lysis and production of endogenous pyrogens
Teichoic acid Staphylococcus adhesion to fibronectin
MSCRAMM Increase tissue adhesion
Protein A Inmune response decreases
9. INTRODUCTION
Virulence factors
Enzymes
Virulence factors Action
Coagulase Transformation of fibrinogen to fibrin (inmune response
decreases)
Hyaluronidase Destruction of hialuronic acid to the spread of s.aureus
Fibrinolysin Dissolves fibrin clots
Lipases Lipid hydrolisis: acumulation of s.aureus
Endonucleases/DNAsa DNA hydrolysis
Beta lactamases
10. INTRODUCTION
Virulence factors
Toxins
Virulence factors Action
Cytotoxins Destroys cells
Exfoliative toxins Cutaneous damages
Enterotoxins Gastrointestinal problems by openin channels
TSST-1 Toxic shock: lymphocyte activation for citokine production
11. Methicillin-resistant Staphylococcus aureus (MRSA)
Infection that doesnt improve with the first line of antibiotics
Acquired in the hospital or in the community
HA
Chilean clone
Brazilian clone
CA USA 300
Virulence factors: severity of infections
Proteolytic activity,
toxic and litic effects
Frequent in patients with weakened
inmune systems
INTRODUCTION
12. Methicillin-resistant Staphylococcus aureus (MRSA)
INTRODUCTION
Symptoms and sings
Skin: red,
swollen
and sore
Secretion
of pus
Wounds
that dont
heal
Chest
pain
Cough
Shortness
of breath
Fatigue
14. OBJECTIVE
To determine the molecular epidemilogy and presence of
virulence genes in community-acquired (CA) and hospital-
acquired (HA) methicillin-resistant Staphylococus aureus
(MRSA) insolates and their relationship to clinical outcomes.
16. MATERIALES Y MÉTODOS
Población de estudio
Junio 2006-Diciembre 2007
Mayores de 18 años
Hospitales de 3° nivel
Muestras clínicas
Enviadas a la laboratorio
de referencia
Datos clínicos
Infección
Resultado
Recaída
Mejora
Muerte
30 días
Sangre
Secreciones
Tejidos blandos
Heridas
18. MATERIALES Y MÉTODOS
PRC: Reacción en cadena de polimerasa
*Kary Mullis --- > 80´s
*Amplificación directa de un gen o un
fragmento de DNA
*Incremento en el número de copias
de un DNA en corto tiempo
21. PRC y el staphylococcus aureus resistente a la meticilina???
MATERIALES Y MÉTODOS
Confirmar especie y resistencia a
meticilina.
*Enterotoxina
*Exfoliativa
*Hemolisina
*Shock Tóxico
*Protíenas adhesivas
Presencia de
23. MATERIALES Y MÉTODOS
PFGE: Electroforesis en gel de campo pulsátil
ELECTROFORESIS
Utilización de corriente eléctrica
controlada
Separación de biomoléculas según:
Carga Tamaño
24. MATERIALES Y MÉTODOS
PFGE: Electroforesis en gel de campo pulsátil
*Reducción del movimiento de las
moléculas utilizando un medio que
oponga resistencia =GEL
Los fragmentos son sometidos a
cargas eléctricas en diferentes
direcciones.
25. MATERIALES Y MÉTODOS
PFGE: Electroforesis en gel de campo pulsátil
*Separación de grandes
fragmentos de DNA
Induce reordenamiento
por cambios eléctricos
periódicos constantes
Duración en el campo
eléctrico determina el tamaño
del fragmento.
26. MATERIALES Y MÉTODOS
Susceptibilidad antimicrobiana Métodos para determinar la
susceptibilidad de los organismos a
agentes antimicrobianos.
*Oxacilina
*Gentamicina
*Rifampicina
*Eritromicina
*Ciprofloxacina
*Vancomicina
*Linezoild
*Tetraciclina
*Clindamicina
*Trimetropim
*Sulfametoxazol
30. Se obtuvieron diferentes patrones de los 270
aislados
• F, U, D, G, H, K,O y P
Por PFGE buscando relación
genética con
• Clon Chileno, Clon USA300-0114,
Clon pediátrico
RESULTADOS
31. • 162 (60 %)
• Clon Chileno -
relación genética
(>78,8%)
PATRÓN F
• 86(31,8%)
• USA300-0114 –
relación genética
(>79%)
PATRÓN U
• 4(1,5%)
• Clon pediátrico–
relación genética
(79%)
PATRÓN D
RESULTADOS
32. • ST1110 - 2 aislamientos
Clon Chileno – gen arcC
• ST1111 – 1 aislamiento
Clon Pediátrico – gen arcC
ANÁLISIS POR MLST
RESULTADOS
34. RESULTADOS
Factores de Virulencia
• Genes sem, sen y seo (184), seg (173), sei (154) ------- Grupo de genes de la
enterotoxina ( EGC )
• Toxina exfoliativa A (52 CA-MRSA y 171 HA-MSRA)
• Toxina exfoliativa B (4)
• Genes sej and seg (2 HA-MRSA)
• Genes sek, seq y lukF-PV/luckS-PS (CA –MRSA)
• Proteínas de unión a fibronectina A y B (CA-MRSA)
37. RESULTADOS
MORTALIDAD • Relación entre la mortalidad y la
infección por HA – MRSA en
comparación con CA-MRSA ( 21 vs
10,6 %)
• Aumento en mortalidad en pacientes
con bacteriemia (45,9%), neumonía (
43,8%), en comparación con infección
en el sitio quirúrgico (10,8%)
• Existen relación directos entre
factores de virulencia y patologías
desarrolladas
39. DISCUSSION
INVESTIGATORS IDEA AGREE OR DISAGREE
Ferry T, Thomas D,
Genestier AL, Bes M, et al.
Described a greater
prevalence of the egc –
positive isolates recovered
from surfaces infections
compared to invasive
infections.
Ferry T, Thomas D,
Genestier AL, Bes M, et al
Observed a negative
relationship between the
egc cluster and clinical
severity
40. DISCUSSION
INVESTIGATORS IDEA AGREE OR DISAGREE
Van Belkun A, Melles DC,
Snijders SV et al
They did not find any
evidence of an association
of the egc cluster with
mortlity in patients with
MRSA- related bacteremia.
Bae IG, Tonthat GT,
Stryjewsky ME et al
They found a paradoxically
higther rate of clinical
healing through the
presence of some adhesive
genes
42. CONCLUSIONS
*Staphylococcus aureus is a microorganism
that causes problems in hospitals, because
when people go to the hospital for many
surgeries can be infected with the organism
*The high quantity of isolates of MRSA are a major problem for a
treatment, this microorganism is difficult to eradicate because when we
want kill the pathogen agent, we found that each clones of MRSA has a
important number of isolates with genomic differences between its.
43. CONCLUSIONS
*The types of MRSA ( USA300-0114, pediatric y
Chilean ) has many genes that generate the
different between its, that to permite separate
the isolates in families. The genetic variability
is essential as a survival mechanism of the
organism.
*This article is very important because the investigators developed a
study for explain the molecular and genetic causes in Staphylococcus
aureus infection, based in identify the genetic variability, then when
they identified the genes that generate differences between clones, the
investigators found the relationship between genes and diseases