1. The study analyzed tetrapod diversity over the Jurassic-Cretaceous boundary using subsampling methods to account for biases in the fossil record.
2. Results showed a prolonged decline in tetrapod diversity through the transition period rather than a single mass extinction event. Extinctions targeted more basal groups and were highest in late Jurassic.
3. Primary drivers of global diversity changes were found to be eustatic sea level changes and paleotemperature, though sampling effects could not be fully ruled out.
Mapping Tools to Support Protected Area Managementreo-southamerica
• Bathymetry
• Biological and habitat information
• Management zones
• Oil and gas activities
• Oceanographic data
• Remotely-operated vehicle tracks
• Underwater photographs
Nourishment and Nursery Habitats: Dietary and Habitat-Use Biomarkers in the Saltmarsh
Created by Kathryn Brinegar @ University of North Carolina at Charlotte
Barry Berejikian's presentation on Steelhead survival rates in Puget Sound, at the 2014 Nisqually Annual Program Review. Barry is a scientist for NOAA.
Mapping Tools to Support Protected Area Managementreo-southamerica
• Bathymetry
• Biological and habitat information
• Management zones
• Oil and gas activities
• Oceanographic data
• Remotely-operated vehicle tracks
• Underwater photographs
Nourishment and Nursery Habitats: Dietary and Habitat-Use Biomarkers in the Saltmarsh
Created by Kathryn Brinegar @ University of North Carolina at Charlotte
Barry Berejikian's presentation on Steelhead survival rates in Puget Sound, at the 2014 Nisqually Annual Program Review. Barry is a scientist for NOAA.
Windermere Science Project stakeholder meeting presentations.
Winfield on the trophic ecology of invasive roach and native charr and perch. Long term study based upon gut content and stable isotope analyses
Pol Tarrats presentation on Sefs9 - Geneva 2015
CLAM project - Global Change in Mountain Lakes
"Study and understand the present to explain the past"
ABSTRACT: Grab samples from Enol Lake (1080 m.a.s.l., Picos de Europa National Park, Spain) were collected to evaluate the chironomid community composition, structure and spatial and temporal variability. We obtained 3 replicate samples at 4, 8, 12, 16 and 20 m water depth four times per year (May, July, September and November) in two consecutive years (2013 and 2014), with a total of 120 samples analyzed. A total of 19 taxa were identified, although the dominant taxa in all samples were Paratanytarsus, Chironomus, Tanytarsus and Procladius choreus. Chironomusand Stictochironomus taxa abundance increased with depth while the more abundant taxa in the littoral were Paratanytarsus,Endochironomus and Corynoneura. Seasonal changes concern many chironomid taxa, although it is more relevant in the case ofCorynoneura, Tanytarsus and Procladius. Spatial changes are mostly related to the presence of macrophytes and algae, especially Chara, as chironomid composition and abundance are very different in samples from macrophyte-rich and poor areas.
Slides of the talk given by Simone Vincenzi (www.simonevincenzi.com), European Research Council Marie Curie Fellow, at the Wildlife & Conservation Biology Seminar Series, UC Berkeley, 24th of October 2014
Presentation by Dr. Jonathan J. Cole, Cary Institute of Ecosystem Studies
Starting in its earliest development, limnology has tended to view lakes as rather isolated from their terrestrial watersheds. This view of lakes as microcosms (Forbes 1887) proved useful in some ways, but it failed to help explain phenomena such as eutrophication which is driven by the external input of nutrients. While the study of limiting nutrients has fully embraced the watershed for decades, the study of C cycling in lakes has maintained a somewhat microcosm viewpoint. This is a viewpoint in which organic C is envisioned as being formed almost entirely by photosynthesis within the system (autochthonous sources); exogenous sources are largely ignored, downplayed, or assumed to be refractory. A number of disparate research threads in recent decades have completely overturned this view.
"Integrated science for integrated management: fairy tale or finally here?" by Phillip Levin, Northwest Fisheries Science Center, USA
ICES ASC Plenary lecture Thursday 18 September 2014
Genetic diversity and phylogeography of
Polynesian Sandalwood (Santalum insulare) by chloroplastic and nuclear microsatellite markers: definition of genetical provenances in Pacific Islands and Asia
Shawn Rummel, Trout Unlimited, "Recovery of Coldwater Ecosystems Following Tr...Michael Hewitt, GISP
This project aims to provide a better understanding of how post-treatment monitoring should be conducted in order to ensure that both the water quality and biological communities are responding positively to the treatment. Preliminary results have shown improvements in water quality following treatment of AMD as well as a shift in the benthic macorinvertebrate community from pollution tolerant taxa to pollution sensitive taxa.
Monitoring Climate Variability and Impact in NV: What's A PA Country Gal Doin...DRIscience
How did a PA Country Gal become a science geek and end up in the desert?
What is the Desert Research Institute?
Some of my research projects include Monitoring Climate Variability, Impact of Climate on Basin Scale ET, and hot new NV research
A presentation designed to inform researchers about how they can use ScienceOpen for advanced search and discovery and increasing their research impact.
Windermere Science Project stakeholder meeting presentations.
Winfield on the trophic ecology of invasive roach and native charr and perch. Long term study based upon gut content and stable isotope analyses
Pol Tarrats presentation on Sefs9 - Geneva 2015
CLAM project - Global Change in Mountain Lakes
"Study and understand the present to explain the past"
ABSTRACT: Grab samples from Enol Lake (1080 m.a.s.l., Picos de Europa National Park, Spain) were collected to evaluate the chironomid community composition, structure and spatial and temporal variability. We obtained 3 replicate samples at 4, 8, 12, 16 and 20 m water depth four times per year (May, July, September and November) in two consecutive years (2013 and 2014), with a total of 120 samples analyzed. A total of 19 taxa were identified, although the dominant taxa in all samples were Paratanytarsus, Chironomus, Tanytarsus and Procladius choreus. Chironomusand Stictochironomus taxa abundance increased with depth while the more abundant taxa in the littoral were Paratanytarsus,Endochironomus and Corynoneura. Seasonal changes concern many chironomid taxa, although it is more relevant in the case ofCorynoneura, Tanytarsus and Procladius. Spatial changes are mostly related to the presence of macrophytes and algae, especially Chara, as chironomid composition and abundance are very different in samples from macrophyte-rich and poor areas.
Slides of the talk given by Simone Vincenzi (www.simonevincenzi.com), European Research Council Marie Curie Fellow, at the Wildlife & Conservation Biology Seminar Series, UC Berkeley, 24th of October 2014
Presentation by Dr. Jonathan J. Cole, Cary Institute of Ecosystem Studies
Starting in its earliest development, limnology has tended to view lakes as rather isolated from their terrestrial watersheds. This view of lakes as microcosms (Forbes 1887) proved useful in some ways, but it failed to help explain phenomena such as eutrophication which is driven by the external input of nutrients. While the study of limiting nutrients has fully embraced the watershed for decades, the study of C cycling in lakes has maintained a somewhat microcosm viewpoint. This is a viewpoint in which organic C is envisioned as being formed almost entirely by photosynthesis within the system (autochthonous sources); exogenous sources are largely ignored, downplayed, or assumed to be refractory. A number of disparate research threads in recent decades have completely overturned this view.
"Integrated science for integrated management: fairy tale or finally here?" by Phillip Levin, Northwest Fisheries Science Center, USA
ICES ASC Plenary lecture Thursday 18 September 2014
Genetic diversity and phylogeography of
Polynesian Sandalwood (Santalum insulare) by chloroplastic and nuclear microsatellite markers: definition of genetical provenances in Pacific Islands and Asia
Shawn Rummel, Trout Unlimited, "Recovery of Coldwater Ecosystems Following Tr...Michael Hewitt, GISP
This project aims to provide a better understanding of how post-treatment monitoring should be conducted in order to ensure that both the water quality and biological communities are responding positively to the treatment. Preliminary results have shown improvements in water quality following treatment of AMD as well as a shift in the benthic macorinvertebrate community from pollution tolerant taxa to pollution sensitive taxa.
Monitoring Climate Variability and Impact in NV: What's A PA Country Gal Doin...DRIscience
How did a PA Country Gal become a science geek and end up in the desert?
What is the Desert Research Institute?
Some of my research projects include Monitoring Climate Variability, Impact of Climate on Basin Scale ET, and hot new NV research
A presentation designed to inform researchers about how they can use ScienceOpen for advanced search and discovery and increasing their research impact.
Championing open science as an early career researcherJonathan Tennant
Presentation given at the Conference on Open Science in the European Research Area, Ljubljana, Slovania, November 2016. https://www.uni-lj.si/research_and_development/open_science/
Presentation given at the ISMTE European meeting in Brussels, November 2016. The theme is Open Communication in scholarly publishing. More details here: http://www.ismte.org/page/2016EuroConference
Slide 1: Title Slide
Extrachromosomal Inheritance
Slide 2: Introduction to Extrachromosomal Inheritance
Definition: Extrachromosomal inheritance refers to the transmission of genetic material that is not found within the nucleus.
Key Components: Involves genes located in mitochondria, chloroplasts, and plasmids.
Slide 3: Mitochondrial Inheritance
Mitochondria: Organelles responsible for energy production.
Mitochondrial DNA (mtDNA): Circular DNA molecule found in mitochondria.
Inheritance Pattern: Maternally inherited, meaning it is passed from mothers to all their offspring.
Diseases: Examples include Leber’s hereditary optic neuropathy (LHON) and mitochondrial myopathy.
Slide 4: Chloroplast Inheritance
Chloroplasts: Organelles responsible for photosynthesis in plants.
Chloroplast DNA (cpDNA): Circular DNA molecule found in chloroplasts.
Inheritance Pattern: Often maternally inherited in most plants, but can vary in some species.
Examples: Variegation in plants, where leaf color patterns are determined by chloroplast DNA.
Slide 5: Plasmid Inheritance
Plasmids: Small, circular DNA molecules found in bacteria and some eukaryotes.
Features: Can carry antibiotic resistance genes and can be transferred between cells through processes like conjugation.
Significance: Important in biotechnology for gene cloning and genetic engineering.
Slide 6: Mechanisms of Extrachromosomal Inheritance
Non-Mendelian Patterns: Do not follow Mendel’s laws of inheritance.
Cytoplasmic Segregation: During cell division, organelles like mitochondria and chloroplasts are randomly distributed to daughter cells.
Heteroplasmy: Presence of more than one type of organellar genome within a cell, leading to variation in expression.
Slide 7: Examples of Extrachromosomal Inheritance
Four O’clock Plant (Mirabilis jalapa): Shows variegated leaves due to different cpDNA in leaf cells.
Petite Mutants in Yeast: Result from mutations in mitochondrial DNA affecting respiration.
Slide 8: Importance of Extrachromosomal Inheritance
Evolution: Provides insight into the evolution of eukaryotic cells.
Medicine: Understanding mitochondrial inheritance helps in diagnosing and treating mitochondrial diseases.
Agriculture: Chloroplast inheritance can be used in plant breeding and genetic modification.
Slide 9: Recent Research and Advances
Gene Editing: Techniques like CRISPR-Cas9 are being used to edit mitochondrial and chloroplast DNA.
Therapies: Development of mitochondrial replacement therapy (MRT) for preventing mitochondrial diseases.
Slide 10: Conclusion
Summary: Extrachromosomal inheritance involves the transmission of genetic material outside the nucleus and plays a crucial role in genetics, medicine, and biotechnology.
Future Directions: Continued research and technological advancements hold promise for new treatments and applications.
Slide 11: Questions and Discussion
Invite Audience: Open the floor for any questions or further discussion on the topic.
What is greenhouse gasses and how many gasses are there to affect the Earth.moosaasad1975
What are greenhouse gasses how they affect the earth and its environment what is the future of the environment and earth how the weather and the climate effects.
(May 29th, 2024) Advancements in Intravital Microscopy- Insights for Preclini...Scintica Instrumentation
Intravital microscopy (IVM) is a powerful tool utilized to study cellular behavior over time and space in vivo. Much of our understanding of cell biology has been accomplished using various in vitro and ex vivo methods; however, these studies do not necessarily reflect the natural dynamics of biological processes. Unlike traditional cell culture or fixed tissue imaging, IVM allows for the ultra-fast high-resolution imaging of cellular processes over time and space and were studied in its natural environment. Real-time visualization of biological processes in the context of an intact organism helps maintain physiological relevance and provide insights into the progression of disease, response to treatments or developmental processes.
In this webinar we give an overview of advanced applications of the IVM system in preclinical research. IVIM technology is a provider of all-in-one intravital microscopy systems and solutions optimized for in vivo imaging of live animal models at sub-micron resolution. The system’s unique features and user-friendly software enables researchers to probe fast dynamic biological processes such as immune cell tracking, cell-cell interaction as well as vascularization and tumor metastasis with exceptional detail. This webinar will also give an overview of IVM being utilized in drug development, offering a view into the intricate interaction between drugs/nanoparticles and tissues in vivo and allows for the evaluation of therapeutic intervention in a variety of tissues and organs. This interdisciplinary collaboration continues to drive the advancements of novel therapeutic strategies.
Observation of Io’s Resurfacing via Plume Deposition Using Ground-based Adapt...Sérgio Sacani
Since volcanic activity was first discovered on Io from Voyager images in 1979, changes
on Io’s surface have been monitored from both spacecraft and ground-based telescopes.
Here, we present the highest spatial resolution images of Io ever obtained from a groundbased telescope. These images, acquired by the SHARK-VIS instrument on the Large
Binocular Telescope, show evidence of a major resurfacing event on Io’s trailing hemisphere. When compared to the most recent spacecraft images, the SHARK-VIS images
show that a plume deposit from a powerful eruption at Pillan Patera has covered part
of the long-lived Pele plume deposit. Although this type of resurfacing event may be common on Io, few have been detected due to the rarity of spacecraft visits and the previously low spatial resolution available from Earth-based telescopes. The SHARK-VIS instrument ushers in a new era of high resolution imaging of Io’s surface using adaptive
optics at visible wavelengths.
Toxic effects of heavy metals : Lead and Arsenicsanjana502982
Heavy metals are naturally occuring metallic chemical elements that have relatively high density, and are toxic at even low concentrations. All toxic metals are termed as heavy metals irrespective of their atomic mass and density, eg. arsenic, lead, mercury, cadmium, thallium, chromium, etc.
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
Deep Behavioral Phenotyping in Systems Neuroscience for Functional Atlasing a...Ana Luísa Pinho
Functional Magnetic Resonance Imaging (fMRI) provides means to characterize brain activations in response to behavior. However, cognitive neuroscience has been limited to group-level effects referring to the performance of specific tasks. To obtain the functional profile of elementary cognitive mechanisms, the combination of brain responses to many tasks is required. Yet, to date, both structural atlases and parcellation-based activations do not fully account for cognitive function and still present several limitations. Further, they do not adapt overall to individual characteristics. In this talk, I will give an account of deep-behavioral phenotyping strategies, namely data-driven methods in large task-fMRI datasets, to optimize functional brain-data collection and improve inference of effects-of-interest related to mental processes. Key to this approach is the employment of fast multi-functional paradigms rich on features that can be well parametrized and, consequently, facilitate the creation of psycho-physiological constructs to be modelled with imaging data. Particular emphasis will be given to music stimuli when studying high-order cognitive mechanisms, due to their ecological nature and quality to enable complex behavior compounded by discrete entities. I will also discuss how deep-behavioral phenotyping and individualized models applied to neuroimaging data can better account for the subject-specific organization of domain-general cognitive systems in the human brain. Finally, the accumulation of functional brain signatures brings the possibility to clarify relationships among tasks and create a univocal link between brain systems and mental functions through: (1) the development of ontologies proposing an organization of cognitive processes; and (2) brain-network taxonomies describing functional specialization. To this end, tools to improve commensurability in cognitive science are necessary, such as public repositories, ontology-based platforms and automated meta-analysis tools. I will thus discuss some brain-atlasing resources currently under development, and their applicability in cognitive as well as clinical neuroscience.
Salas, V. (2024) "John of St. Thomas (Poinsot) on the Science of Sacred Theol...Studia Poinsotiana
I Introduction
II Subalternation and Theology
III Theology and Dogmatic Declarations
IV The Mixed Principles of Theology
V Virtual Revelation: The Unity of Theology
VI Theology as a Natural Science
VII Theology’s Certitude
VIII Conclusion
Notes
Bibliography
All the contents are fully attributable to the author, Doctor Victor Salas. Should you wish to get this text republished, get in touch with the author or the editorial committee of the Studia Poinsotiana. Insofar as possible, we will be happy to broker your contact.
DERIVATION OF MODIFIED BERNOULLI EQUATION WITH VISCOUS EFFECTS AND TERMINAL V...Wasswaderrick3
In this book, we use conservation of energy techniques on a fluid element to derive the Modified Bernoulli equation of flow with viscous or friction effects. We derive the general equation of flow/ velocity and then from this we derive the Pouiselle flow equation, the transition flow equation and the turbulent flow equation. In the situations where there are no viscous effects , the equation reduces to the Bernoulli equation. From experimental results, we are able to include other terms in the Bernoulli equation. We also look at cases where pressure gradients exist. We use the Modified Bernoulli equation to derive equations of flow rate for pipes of different cross sectional areas connected together. We also extend our techniques of energy conservation to a sphere falling in a viscous medium under the effect of gravity. We demonstrate Stokes equation of terminal velocity and turbulent flow equation. We look at a way of calculating the time taken for a body to fall in a viscous medium. We also look at the general equation of terminal velocity.
3. History of the Jurassic/Cretaceous boundary
• Pioneering work by Newell, Raup, Sepkoski (and his compendia)
• Originally considered to be a ‘major extinction’
• Understood general controls on the fossil record
• Current consensus: NOT a mass extinction
Jon Tennant Background
Raup (1976) Raup and Sepkoski (1982) Hallam (1986)
4. The structure of the fossil record
Jon Tennant Background
Smith and McGowan (2011)
Tennant et al. (2016)
Raw diversity is not a reliable
estimate of ‘true’ or relative diversity
The fossil record is affected by several
levels of sampling filters/’biases’
5. Why the J/K boundary?
Jon Tennant Background
Benson and Butler (2011)
Nicholson et al. (2015)
Zanno and Makovicky (2013)
Bronzati et al. (2015)
Newham et al. (2014)
6. What do we want to know?
1. What is the structure of changes in tetrapod
diversity over the J/K transition? Was there a
‘hidden’ mass extinction?
2. What external factors were responsible for
mediating these changes?
Jon Tennant Methods
7. Data. More data.
• 4907 species
• 15,472 occurrences, 7314 references
• Split into higher taxonomic clades
• Fully aquatic or non-marine
• Palaeocontinents
• Time binning methods
Jon Tennant Methods
Tennant et al. (2016)
9. • Tetrapod SQS diversity
falls in both the non-
marine and marine realms
• Finer clade-level dynamics
obscured
• Bootstrapping provides
constraints to overall
patterns
Jon Tennant Results
10. Dinosaur diversity
Jon Tennant Results
• SQS shows greatest decline in theropods
• Sauropods too poorly sampled in Berriasian
• PDE shows greatest decline in sauropods
• Decline less emphasised in theropods
11. Non-dinosaurian tetrapod diversity
Jon Tennant Results
• Staggered pulses of decline and radiation of new clades
• No singular marked ‘event’ at the boundary itself
• Smaller bodied sized animals generally more poorly sampled
12. Marine tetrapod diversity
Jon Tennant Results
• Earliest Cretaceous very poorly sampled
• Seems to track pattern of a global
eustatic lowstand
• Similar pattern seen in PDE
• Sampling from continuous lineages
great for ‘filling in the gaps’
13. A hidden mass extinction at the J/K
boundary?
• No. A prolonged wave of extinctions through the ‘transition’,
coupled with radiations of new groups
• Extinctions target more ‘basal’ groups, and are highest at the
end of the Jurassic
• Magnitude of diversity loss varies – ~33% for ornithischians
to 75-80% for theropods and pterosaurs
• High Late Jurassic origination rates for different groups do
not confer an extinction survival advantage
Jon Tennant Conclusions
18. What controls Jurassic/Cretaceous diversity?
• Primary driver on a global scale was eustatic sea level
• Palaeotemperature also an important factor
• Sampling over-prints raw diversity estimates
• Subsampling methods appear to alleviate sampling
issues
• Cannot rule out evidence of a local common cause
factor in North America
Jon Tennant Conclusions
19. • Major flood basalt and bolide activity
• Marine revolution in micro-organism communities
• Oligotrophic marine conditions likely related to the sea-level regression across the J/K boundary
• Have to consider all levels of an ecosystem and the environment to build a complete picture