Librarians have an opportunity to get involved in research data management (RDM) by establishing credibility in this new area and learning new technical skills. RDM allows librarians to get closer to the research community and their processes. It also gives librarians access to unpublished research materials. The document discusses several roles and areas of engagement for librarians in RDM, including supporting RDM processes and workflows, infrastructure, governance, and skills development. It provides recommendations for libraries to get started with RDM and compares different training courses available to prepare librarians for RDM roles and competencies.
This tutorial deals with two software tools: VOSviewer and CitNetExplorer. VOSviewer (www.vosviewer.com) is a freely available tool for constructing and visualizing bibliographic coupling, co-citation, co-authorship, and term co-occurrence networks. These networks can be constructed based on data downloaded from Web of Science or Scopus. CitNetExplorer (www.citnetexplorer.nl) is a freely available tool for analyzing and visualizing citation networks of publications.
The aim of the tutorial is to provide the participants with a basic knowledge of VOSviewer and CitNetExplorer. Given time constraints, it will not be possible to explore the two tools in a fully comprehensive way, but the tutorial will offer a thorough introduction into the most essential features of the tools. This should be sufficient for the participants to perform all basic analyses that can be done using VOSviewer and CitNetExplorer. In addition, it should allow the participants to independently explore the tools in more detail.
The lecturers are Nees Jan van Eck and Ludo Waltman, both affiliated to the Centre for Science and Technology Studies (CWTS) of Leiden University. Nees Jan and Ludo are the developers and VOSviewer and CitNetExplorer, and they therefore have an in-depth knowledge of both software tools. Nees Jan and Ludo regularly organize courses and workshops on VOSviewer and CitNetExplorer (see for instance www.cwts.nl/Bibliometric-Network-Analysis-and-Science-Mapping-Using-VOSviewer), so they have a lot of experience in training people in the use of these tools.
A presentation on important conferences/events in digital library by Rupesh Kumar A, Assistant Professor, Department of Studies and Research in Library and Information Science, Tumkur University, Karnataka, India.
A digital library is a special library with a focused collection of digital objects that can include text, visual material, audio material, video material, stored as electronic media formats (as opposed to print, microform, or other media), along with means for organizing, storing, and retrieving the files and media contained in the library collection.
This PPT contain details of Z39.50 and useful for Library Science students. This protocol used for information retrieval and in the end list of different types of protocols are given.
This tutorial deals with two software tools: VOSviewer and CitNetExplorer. VOSviewer (www.vosviewer.com) is a freely available tool for constructing and visualizing bibliographic coupling, co-citation, co-authorship, and term co-occurrence networks. These networks can be constructed based on data downloaded from Web of Science or Scopus. CitNetExplorer (www.citnetexplorer.nl) is a freely available tool for analyzing and visualizing citation networks of publications.
The aim of the tutorial is to provide the participants with a basic knowledge of VOSviewer and CitNetExplorer. Given time constraints, it will not be possible to explore the two tools in a fully comprehensive way, but the tutorial will offer a thorough introduction into the most essential features of the tools. This should be sufficient for the participants to perform all basic analyses that can be done using VOSviewer and CitNetExplorer. In addition, it should allow the participants to independently explore the tools in more detail.
The lecturers are Nees Jan van Eck and Ludo Waltman, both affiliated to the Centre for Science and Technology Studies (CWTS) of Leiden University. Nees Jan and Ludo are the developers and VOSviewer and CitNetExplorer, and they therefore have an in-depth knowledge of both software tools. Nees Jan and Ludo regularly organize courses and workshops on VOSviewer and CitNetExplorer (see for instance www.cwts.nl/Bibliometric-Network-Analysis-and-Science-Mapping-Using-VOSviewer), so they have a lot of experience in training people in the use of these tools.
A presentation on important conferences/events in digital library by Rupesh Kumar A, Assistant Professor, Department of Studies and Research in Library and Information Science, Tumkur University, Karnataka, India.
A digital library is a special library with a focused collection of digital objects that can include text, visual material, audio material, video material, stored as electronic media formats (as opposed to print, microform, or other media), along with means for organizing, storing, and retrieving the files and media contained in the library collection.
This PPT contain details of Z39.50 and useful for Library Science students. This protocol used for information retrieval and in the end list of different types of protocols are given.
A presentation on Digital Preservation by Rupesh Kumar A, Assistant Professor, Department of Studies and Research in Library and Information Science, Tumkur University, Tumakuru, Karnataka, India.
The presentation gives an overview of what metadata is and why it is important. It also addresses the benefits that metadata can bring and offers advice and tips on how to produce good quality metadata and, to close, how EUDAT uses metadata in the B2FIND service.
November 2016
Digital Humanities: Role of Librarians and Libraries. The use of digital evidence & methods digital authoring, publishing, digital curation and preservation, digital use and reuse of scholarship.
This ppt is mainly for library professionals and digital humanities cohorts
Library automation refers to the implementation of information and communications technologies (ICT) in the libraries and information centres for replacing manual library operations. The term automation is used for any process which is done through input and output operation. Library automation system includes maintenance of large bibliographical database. The status of library automation depends on Interaction between human and computer to accomplish various tasks of the library automation systems. In order to provide and also to enable the records in the database. The international standards for bibliographic description of library automation system uses sophisticated software tools and standard to index search and display information from the database created.
Cuna Ekmekcioglu (University of Edinburgh) - “Engaging academic support libra...ARLGSW
Presentation from the 6th CILIP ARLG-SW Discover Academic Research and Training Support Conference (DARTS6). Dartington Hall, Totnes, Thursday 24th – Friday 25th May 2018
Libraries and Research Data Management – What Works? Lessons Learned from the...LIBER Europe
This presentation by Dr Birgit Schmidt was given at the Scholarly Communication and Research Infrastructures Steering Committee Workshop. The workshop title was Libraries and Research Data Management – What Works?
A presentation on Digital Preservation by Rupesh Kumar A, Assistant Professor, Department of Studies and Research in Library and Information Science, Tumkur University, Tumakuru, Karnataka, India.
The presentation gives an overview of what metadata is and why it is important. It also addresses the benefits that metadata can bring and offers advice and tips on how to produce good quality metadata and, to close, how EUDAT uses metadata in the B2FIND service.
November 2016
Digital Humanities: Role of Librarians and Libraries. The use of digital evidence & methods digital authoring, publishing, digital curation and preservation, digital use and reuse of scholarship.
This ppt is mainly for library professionals and digital humanities cohorts
Library automation refers to the implementation of information and communications technologies (ICT) in the libraries and information centres for replacing manual library operations. The term automation is used for any process which is done through input and output operation. Library automation system includes maintenance of large bibliographical database. The status of library automation depends on Interaction between human and computer to accomplish various tasks of the library automation systems. In order to provide and also to enable the records in the database. The international standards for bibliographic description of library automation system uses sophisticated software tools and standard to index search and display information from the database created.
Cuna Ekmekcioglu (University of Edinburgh) - “Engaging academic support libra...ARLGSW
Presentation from the 6th CILIP ARLG-SW Discover Academic Research and Training Support Conference (DARTS6). Dartington Hall, Totnes, Thursday 24th – Friday 25th May 2018
Libraries and Research Data Management – What Works? Lessons Learned from the...LIBER Europe
This presentation by Dr Birgit Schmidt was given at the Scholarly Communication and Research Infrastructures Steering Committee Workshop. The workshop title was Libraries and Research Data Management – What Works?
Libraries and Research Data Management – What Works? Summary of a Pre-Survey.LIBER Europe
This presentation by Rob Grim was given at the Scholarly Communication and Research Infrastructures Steering Committee Workshop. The workshop title was Libraries and Research Data Management – What Works?
Institutional research data services in Higher Education. Session 1.6 of the RDMRose v3 materials.
The JISC funded RDMRose project (June 2012-May 2013) was a collaboration between the libraries of the University of Leeds, Sheffield and York, with the Information School at Sheffield to provide an Open Educational Resource for information professionals on Research Data Management. The materials were revised between November 2014 and February 2015 for the consortium of North West Academic Libraries (NoWAL).
http://www.sheffield.ac.uk/is/research/projects/rdmrose
EUDAT & OpenAIRE Webinar: How to write a Data Management Plan - July 7, 2016|...EUDAT
| www.eudat.eu | 1st Session: July 7, 2016.
In this webinar, Sarah Jones (DCC) and Marjan Grootveld (DANS) talked through the aspects that Horizon 2020 requires from a DMP. They discussed examples from real DMPs and also touched upon the Software Management Plan, which for some projects can be a sensible addition
An introduction to Research Data Management and Data Management Planning presented at the University of the West of England on Wednesday 9th July 2014.
Supporting Research Data Management in UK Universities: the Jisc Managing Res...L Molloy
Research data management in the UK: interventions by the Jisc Managing Research Data programme and the Digital Curation Centre. Specifies the importance of academic librarians for RDM. Includes links to openly available training resources. Presentation by L Molloy to ExLibris event, 'Excellence in Academic Knowledge Management', Utrecht, 29 October 2013.
Similar to RDM librarians Skills & Competencies: roles & training (SPARC & COAR Member Workshop) (20)
Earliest Galaxies in the JADES Origins Field: Luminosity Function and Cosmic ...Sérgio Sacani
We characterize the earliest galaxy population in the JADES Origins Field (JOF), the deepest
imaging field observed with JWST. We make use of the ancillary Hubble optical images (5 filters
spanning 0.4−0.9µm) and novel JWST images with 14 filters spanning 0.8−5µm, including 7 mediumband filters, and reaching total exposure times of up to 46 hours per filter. We combine all our data
at > 2.3µm to construct an ultradeep image, reaching as deep as ≈ 31.4 AB mag in the stack and
30.3-31.0 AB mag (5σ, r = 0.1” circular aperture) in individual filters. We measure photometric
redshifts and use robust selection criteria to identify a sample of eight galaxy candidates at redshifts
z = 11.5 − 15. These objects show compact half-light radii of R1/2 ∼ 50 − 200pc, stellar masses of
M⋆ ∼ 107−108M⊙, and star-formation rates of SFR ∼ 0.1−1 M⊙ yr−1
. Our search finds no candidates
at 15 < z < 20, placing upper limits at these redshifts. We develop a forward modeling approach to
infer the properties of the evolving luminosity function without binning in redshift or luminosity that
marginalizes over the photometric redshift uncertainty of our candidate galaxies and incorporates the
impact of non-detections. We find a z = 12 luminosity function in good agreement with prior results,
and that the luminosity function normalization and UV luminosity density decline by a factor of ∼ 2.5
from z = 12 to z = 14. We discuss the possible implications of our results in the context of theoretical
models for evolution of the dark matter halo mass function.
Professional air quality monitoring systems provide immediate, on-site data for analysis, compliance, and decision-making.
Monitor common gases, weather parameters, particulates.
Introduction:
RNA interference (RNAi) or Post-Transcriptional Gene Silencing (PTGS) is an important biological process for modulating eukaryotic gene expression.
It is highly conserved process of posttranscriptional gene silencing by which double stranded RNA (dsRNA) causes sequence-specific degradation of mRNA sequences.
dsRNA-induced gene silencing (RNAi) is reported in a wide range of eukaryotes ranging from worms, insects, mammals and plants.
This process mediates resistance to both endogenous parasitic and exogenous pathogenic nucleic acids, and regulates the expression of protein-coding genes.
What are small ncRNAs?
micro RNA (miRNA)
short interfering RNA (siRNA)
Properties of small non-coding RNA:
Involved in silencing mRNA transcripts.
Called “small” because they are usually only about 21-24 nucleotides long.
Synthesized by first cutting up longer precursor sequences (like the 61nt one that Lee discovered).
Silence an mRNA by base pairing with some sequence on the mRNA.
Discovery of siRNA?
The first small RNA:
In 1993 Rosalind Lee (Victor Ambros lab) was studying a non- coding gene in C. elegans, lin-4, that was involved in silencing of another gene, lin-14, at the appropriate time in the
development of the worm C. elegans.
Two small transcripts of lin-4 (22nt and 61nt) were found to be complementary to a sequence in the 3' UTR of lin-14.
Because lin-4 encoded no protein, she deduced that it must be these transcripts that are causing the silencing by RNA-RNA interactions.
Types of RNAi ( non coding RNA)
MiRNA
Length (23-25 nt)
Trans acting
Binds with target MRNA in mismatch
Translation inhibition
Si RNA
Length 21 nt.
Cis acting
Bind with target Mrna in perfect complementary sequence
Piwi-RNA
Length ; 25 to 36 nt.
Expressed in Germ Cells
Regulates trnasposomes activity
MECHANISM OF RNAI:
First the double-stranded RNA teams up with a protein complex named Dicer, which cuts the long RNA into short pieces.
Then another protein complex called RISC (RNA-induced silencing complex) discards one of the two RNA strands.
The RISC-docked, single-stranded RNA then pairs with the homologous mRNA and destroys it.
THE RISC COMPLEX:
RISC is large(>500kD) RNA multi- protein Binding complex which triggers MRNA degradation in response to MRNA
Unwinding of double stranded Si RNA by ATP independent Helicase
Active component of RISC is Ago proteins( ENDONUCLEASE) which cleave target MRNA.
DICER: endonuclease (RNase Family III)
Argonaute: Central Component of the RNA-Induced Silencing Complex (RISC)
One strand of the dsRNA produced by Dicer is retained in the RISC complex in association with Argonaute
ARGONAUTE PROTEIN :
1.PAZ(PIWI/Argonaute/ Zwille)- Recognition of target MRNA
2.PIWI (p-element induced wimpy Testis)- breaks Phosphodiester bond of mRNA.)RNAse H activity.
MiRNA:
The Double-stranded RNAs are naturally produced in eukaryotic cells during development, and they have a key role in regulating gene expression .
THE IMPORTANCE OF MARTIAN ATMOSPHERE SAMPLE RETURN.Sérgio Sacani
The return of a sample of near-surface atmosphere from Mars would facilitate answers to several first-order science questions surrounding the formation and evolution of the planet. One of the important aspects of terrestrial planet formation in general is the role that primary atmospheres played in influencing the chemistry and structure of the planets and their antecedents. Studies of the martian atmosphere can be used to investigate the role of a primary atmosphere in its history. Atmosphere samples would also inform our understanding of the near-surface chemistry of the planet, and ultimately the prospects for life. High-precision isotopic analyses of constituent gases are needed to address these questions, requiring that the analyses are made on returned samples rather than in situ.
This pdf is about the Schizophrenia.
For more details visit on YouTube; @SELF-EXPLANATORY;
https://www.youtube.com/channel/UCAiarMZDNhe1A3Rnpr_WkzA/videos
Thanks...!
Richard's entangled aventures in wonderlandRichard Gill
Since the loophole-free Bell experiments of 2020 and the Nobel prizes in physics of 2022, critics of Bell's work have retreated to the fortress of super-determinism. Now, super-determinism is a derogatory word - it just means "determinism". Palmer, Hance and Hossenfelder argue that quantum mechanics and determinism are not incompatible, using a sophisticated mathematical construction based on a subtle thinning of allowed states and measurements in quantum mechanics, such that what is left appears to make Bell's argument fail, without altering the empirical predictions of quantum mechanics. I think however that it is a smoke screen, and the slogan "lost in math" comes to my mind. I will discuss some other recent disproofs of Bell's theorem using the language of causality based on causal graphs. Causal thinking is also central to law and justice. I will mention surprising connections to my work on serial killer nurse cases, in particular the Dutch case of Lucia de Berk and the current UK case of Lucy Letby.
RDM librarians Skills & Competencies: roles & training (SPARC & COAR Member Workshop)
1. RESEARCH DATA MANAGEMENT
Librarians Skills & Competencies
Roles & Training
Pedro Príncipe – pedroprincipe@sdum.uminho.pt
Joint COAR/SPARC Workshop
[April 14, 2014]
2. What does RDM offer to librarians?
Chance:
to establish credibility in a new area of
engagement
to learn new ‘technical skills’.
Opportunity:
to get closer to the research community and their
research processes (closer working relationships).
to get your hands dirty with unpublished or raw
materials that are the building blocks of
knowledge.
5. WHAT RESEARCH DATA
MANAGEMENT PROCESSES
ARE WE SUPPORTING?
What Research Data Management processes we need to support?
What Research Data Management processes are we suppose to support?
5
8. 10 Recommendations for libraries to get
started with research data management
Regrouping the recommendations – Areas of engagement
Support services
#1 Offer research data management support, including data management plans for grant applications, intellectual
property rights advice and information materials. Assist faculty with data management plans and the integration of
data management into the curriculum.
#6 Support the lifecycle for research data by providing services for storage, discovery and permanent access.
Infrastructure & standards
#2 Engage in the development of metadata and data standards and provide metadata services for research data.
#5 Liaise and partner with researchers, research groups, data archives and data centers to foster an
interoperable infrastructure for data access, discovery and data sharing.
#7 Promote research data citation by applying persistent identifiers to research data.
#8 Provide an institutional Data Catalogue or Data Repository, depending on available infrastructure.
#10 Offer or mediate secure storage for dynamic and static research data in co-operation with institutional IT
units and/or seek exploitation of appropriate cloud services.
Policy & disciplinary practices
#4 Actively participate in institutional research data policy development, including resource plans. Encourage
and adopt open data policies where appropriate in the research data life cycle.
#7 ... (with some disciplinary views on data citation)
Skills & staffing
#3 Create Data Librarian posts and develop professional staff skills for data librarianship.
#1 … and the integration of data management into the curriculum.
8
9. Areas of RDM engagement
Support
services
Infrastructure
& standards
Policy &
disciplinary
practices
Skills &
staffing
10. Roles & competences
Simple exercise:
Map LIBER recommendations
With some of the competences identified by RDMRose
project (http://rdmrose.group.shef.ac.uk/?page_id=10#session-13-the-lis-role-in-rdm)
11. Some highlights of LIBER
Recommendations
RDM support on data management plans for grant
applications and advice on intellectual property
rights.
Reference interview management, knowledge of RDM
principles
Knowledge of institutional and extra-institutional
resources
Knowledge of researchers’ needs, knowledge of available
material
Provide metadata services for research data.
Metadata skills
12. Some highlights of LIBER
Recommendations
Encourage and adopt open data policies.
Knowledge of researchers’ needs, knowledge of
available material
Audit interviews, knowledge of RDM principles,
metadata, licensing
Participate in institutional research data
policy developments
Strategic understanding and influencing skills
Knowledge of institution
13. Some highlights of LIBER
Recommendations
Liaise and partner with researchers, research
groups, data archives and centers to foster an
infrastructure for data access, discovery and sharing.
Knowledge of institution
Knowledge of RDM principles, relevant technologies and
processes, metadata
Support the lifecycle for research data by providing
services for storage, discovery and access.
Knowledge of RDM principles, relevant technologies and
processes, metadata
Metadata skills
14. Some highlights of LIBER
Recommendations
Provide an institutional Data Catalogue or Data
Repository, depending on available infrastructure.
Audit interviews, knowledge of RDM principles,
metadata, licensing
Knowledge of RDM principles, relevant technologies and
processes, metadata
Get involved in subject specific data management
practice.
Understanding of RDM best practices as they apply to
relevant disciplines; pedagogic skills
Knowledge of institution
21. PhD
student
university
research
team
individual
researcher
supra-
university
Where do I safely keep my
data from my fieldwork, as
I travel home?
How can I best keep
years worth of research
data secure and
accessible for when I
and others need to re-
use it?
How do we ensure
compliance to funders’
requirement for several
years of open access to
data?
How do we ensure we
have access to our
research data after some
of the team have left?
How can our
research
collaborations share
data, and make
them available once
complete?
Seeking the real win + win + win + win + win……
Tony Weir, Director, IT Infrastructure, UoE
41. RDM Support (University of Amsterdam)
http://figshare.com/articles/RDM_Support_basic_tr
aining_course_for_information_specialists/1285313
41
42.
43.
44. RDM Support (University of Amsterdam)
http://figshare.com/articles/RDM_Support_basic_tr
aining_course_for_information_specialists/1285313
44
45. Course comparisons
RDMRose
Intro & roles
Policy & practice
Lifecycle & DMPs
Support landscape
(Open) data
RDM, repositories,
metadata &
citation
Case study & job
descriptions
Roles &
responsibilities.
Reflecton.
Essentials 4
data support
Definitions
Planning
Collecting,
describing &
storing data
Archive, publish,
cite data
Policy, practice,
licensing
Data support,
roles, case
studies
SupportDM
Intro to data
& RDM
Supporting
researchers
DMPs
What to keep
and why
Cataloguing
data
Data sharing
RDM Support
Intro to RDM
Data & services
DMPs
Data storage &
retention
Data description
Rules on
research data
Data sharing
and reuse
DIY Kit
Research data
explained
DMPs
Documentation
Storage &
security
Ethics &
copyright
Data sharing
Case study
Intros
Policy
DMPs
Description
Storage
Case studiesRoles
Legal issues
Archive & share
Support &
services
Sarah Jones @sjDCC slide
http://www.dcc.ac.uk/sites/default/files/documents/events/workshops/Comparing-notes/RDM-courses.pptx
46. We need to…
gain confidence
and understanding rdm issues
46
47. DO NOT USE LACK OF INFRASTRUTURE
AS AN EXCUSE NOT TO START WITH
RDM SERVICES
Lesson Learned:
47
Have a vote first for all recommendations – show the color which fits best for you
What is the main color of all votes (for each of the 10 recommendations)
Analyzing several training resources we find some common themes (institutional level or national or border level)
An Open Educational Resource on RDM tailored for information professionals
An Open Educational Resource on RDM tailored for information professionals
Provided by EDINA and Data Library, University of Edinburgh in association with the UK Data Archive, Digital Curation Centre (DCC), and Distributed Data Curation Center at the Purdue University Libraries.
Session 1: Data management planning
Session 2: Organising & documenting data
Session 3: Data storage & security
Session 4: Ethics & copyright
Session 5: Data sharing
Provided by EDINA and Data Library, University of Edinburgh in association with the UK Data Archive, Digital Curation Centre (DCC), and Distributed Data Curation Center at the Purdue University Libraries.
University of East London, new university with a desire to build its research capacity.
University of East London, new university with a desire to build its research capacity.
RDM Support is a basic training course in research data management (support) for information specialists. The training course was developed by Mariëtte van Selm for the information specialists of the Library of the University of Amsterdam (UvA), within the framework of the RDM Support project (2013-2015). The training course was held from January to April 2014.
RDM Support is a basic training course in research data management (support) for information specialists. The training course was developed by Mariëtte van Selm for the information specialists of the Library of the University of Amsterdam (UvA), within the framework of the RDM Support project (2013-2015). The training course was held from January to April 2014.