The study investigated marks of hypogenic karstification in the carbonate aquifer system of Buda Thermal Karst, Hungary. Cavities and mud losses indicating deep karstification were analyzed in 78 water exploration wells and found to occur in all carbonate hydrostratigraphical units, including marls. The connection between cavities and structural elements was detected in some cases but not demonstrable in others. Cavities were found from several meters to 300-350 meters depth and crossed multiple formations, though not both Triassic and Eocene units. Future work will further compare cavity presence to geological logs.