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FIP1/RCP Binding to Golgin-97
 Regulates Retrograde Transport from
Recycling Endosomes to the trans-Golgi
               Network
        Mol. Biol. Cell. 2010 21(17): 3041 – 3053

                  Presented by
                 Mariam Rizkallah
        Cell and Molecular Biology Course,
         The American University in Cairo
                November 15, 2011
              Mariam Rizkallah - BIOT502 - Nov 15, 2011
Outline




Mariam Rizkallah - BIOT502 - Nov 15, 2011
Introduction: Vesicular Traffic




Image credit: Molecular Cell Biology, Fifth Edition © 2003 W.H. Freeman and Company
                                          Mariam Rizkallah - BIOT502 - Nov 15, 2011
Introduction: Vesicular Traffic
                       Nascent Peptides Fate
                             From ER

 Enzymes and structural                                   Transport vesicles
  proteins remain in ER                                   bud to cis-Golgi

                               Vesicle membrane proteins              Cisternal maturation
                                 recycled or missorted                through Golgi
                                      bud back to ER


          Golgi-resident proteins              Secretion             Lysosome membrane
          retrotransport to Golgi              (regulated            or soluble proteins
                                               or constitutive)      bud to late endosome




                   Mariam Rizkallah - BIOT502 - Nov 15, 2011
Introduction: Where to Go?
• Soluble NSF Attachment
  Protein REceptor (SNAREs)
  crucial for cargo sorting
• Membrane budding from
  donor organelle, and
  fusion with target
  organelle
• Vesicle internal membrane
  proteins (v-SNAREs) join
  with target membrane
  proteins (t-SNAREs)
                                                              Image credit: Molecular Cell Biology, Fifth
                  Mariam Rizkallah - BIOT502 - Nov 15, 2011
                                                              Edition © 2003 W.H. Freeman and Company
Introduction: Where to Go?
•    Rab (GTPase superfamily), and Rab-mediated docking
•    VAMP (vesicle-associated membrane protein) as type of v-SNAREs
•    Syntaxin (integral) and SNAP-25 (attached) as types of t-SNAREs
•    SNARE coiled-coil complexes
•    NSF-catalyzed hydrolysis of ATP and dissociation of the SNARE complexes




Image credit: Molecular Cell Biology, Fifth Edition © 2003 W.H. Freeman and Company
                                          Mariam Rizkallah - BIOT502 - Nov 15, 2011
The Trans-Golgi Network (TGN)
•Extension of the trans-Golgi
•Sorting station (proteins and
  lipids)
•Golgins: regulate transport and
  maintain structure
•Cargo is either:
- Transported to lysosomes
  (mannose 6-phosphate receptor)
- Packaged for secretion
                                              The intracellular structures known at the
- Reside TNG (Golgins)                        Golgi complex are involved in protein
•Problem: Which Golgin regulates              processing and secretion.

  what transport?                             Image credits: Golgi - Biology Encyclopedia
                    Mariam Rizkallah - BIOT502 - Nov 15, 2011
Model for FIP1/RCP Function in
              Retrograde Transport




Image credits: http://adoptamicrobe.blogspot.com/2006/06/escherichia-coli.html
                                  Mariam Rizkallah - BIOT502 - Nov 15, 2011
Retrograde Transport of TNG38, STxB
            and VAMP4
• Major players:
  - Rab11: Retrograde transport regulation
  - Golgin-97: TNG’s t-SNAREs (GRIP domain and
  FIP1/RCP-binding/coiled-coil domain)
  - FIP1/RCP: RE’s v-SNAREs




                 Mariam Rizkallah - BIOT502 - Nov 15, 2011
Who Did It?
• Identifying the major players through:
  - Knockdown of Rab11a/b or its interacting protein
  FIP1/RCP to prove that EE/RE –and not EE/LE— to
  TNG transport is Rab11-mediated [Control: ]
  - Investigation of FIP1/RCP direct binding to Golgin-
  97 in vitro and in vivo to prove that binding is
  required for the retrograde transport from EE/RE –
  and not EE/LE— to the TGN [Control: CI-MPR6]


                  Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results and Conclusions
1. Rab11 Is Required for the Localization of TGN38 to
    TGN
Rationale: Investigation of the role of Rab11
Methods:
HeLa cells-Tac-TNG38 transfected with siRNA against
Rab11a and/or b
Knockdown of both a/b resulted in:
      - Retention of TNG38
      - Redistribution of FIP1/RCP to cytoplasm
      - Decrease in FIPs levels (FIP1/RCP and FIP5/Rip11)

                   Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results: Rab11 Is Required for the
     Localization of TGN38 to TGN
Immunoblotting




Localization of FIP1/RCP




                           Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results: Rab11 Is Required for the
  Localization of TGN38 to TGN




                                                      E-G: Mock
            Staining With Antibodies                  H-J: FIP1/RCP

          Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results and Conclusions
2. FIP1/RCP Is Required for Retrograde TGN38
    Transport
Rationale:
Investigation of role of different FIPs
Methods:
HeLa cells-Tac-TNG38 transfected with siRNA against
Knockdown of FIP5/Rip11, FIP1/RCP, and FIP3 resulted in:
       - Redistribution of Tac-TGN38 from TGN to
perinuclear punctuate organelles


                   Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results: FIP1/RCP Is Required for
  Retrograde TGN38 Transport




    Immunoblotting                               Localization of FIP1/RCP
               Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results: FIP1/RCP Is Required for
  Retrograde TGN38 Transport




                                                      C-E: Mock
                                                      F-H: FIP1/RCP KD
                                                      I-M: Higher
                                                      magnification

          Mariam Rizkallah - BIOT502 - Nov 15, 2011
Results: FIP1/RCP Is Required for
  Retrograde TGN38 Transport




                                                               Slides from
                                                               17-29 were
                                                              not prepared

  HeLa cells treated with either mock siRNA or FIP1/RCP siRNA

                  Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011
Conclusion
1. Identified Golgin-97 as binding partner for FIP1/RCP
   (Immunoppt and yeast two-hybrid and glutathione
   bead pulldown assays)
2. Knockdown results in accumulation of TGN38 in
   endocytic organelles containing the retromer
   complex (SNX1), EpsinR, and transferrin receptor.
3. Interaction between Golgin-97 and FIP1/RCP
   suggests that FIP1/RCP may act as a tethering factor,
   which mediates EE/RE-derived retrograde carrier
   docking and subsequent fusion at the TGN.


                  Mariam Rizkallah - BIOT502 - Nov 15, 2011
References
• Jing, J., Junutula, J. R., Wu, C., Burden, J., Matern, H., Peden,
  A. A., & Prekeris, R. (2010). FIP1/RCP binding to Golgin-97
  regulates retrograde transport from recycling endosomes to
  the trans-Golgi network. Molecular biology of the cell, 21(17),
  3041-53. doi:10.1091/mbc.E10-04-0313
• Lee, M.-S., Cherla, R. P., & Tesh, V. L. (2010). Shiga Toxins:
  Intracellular Trafficking to the ER Leading to Activation of Host
  Cell Stress Responses. Toxins, 2(6), 1515-35. Molecular
  Diversity Preservation International.
  doi:10.3390/toxins2061515



                      Mariam Rizkallah - BIOT502 - Nov 15, 2011
Questions




Mariam Rizkallah - BIOT502 - Nov 15, 2011
Mariam Rizkallah - BIOT502 - Nov 15, 2011

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Mrr cmb journal_club_20111115

  • 1. FIP1/RCP Binding to Golgin-97 Regulates Retrograde Transport from Recycling Endosomes to the trans-Golgi Network Mol. Biol. Cell. 2010 21(17): 3041 – 3053 Presented by Mariam Rizkallah Cell and Molecular Biology Course, The American University in Cairo November 15, 2011 Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 2. Outline Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 3. Introduction: Vesicular Traffic Image credit: Molecular Cell Biology, Fifth Edition © 2003 W.H. Freeman and Company Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 4. Introduction: Vesicular Traffic Nascent Peptides Fate From ER Enzymes and structural Transport vesicles proteins remain in ER bud to cis-Golgi Vesicle membrane proteins Cisternal maturation recycled or missorted through Golgi bud back to ER Golgi-resident proteins Secretion Lysosome membrane retrotransport to Golgi (regulated or soluble proteins or constitutive) bud to late endosome Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 5. Introduction: Where to Go? • Soluble NSF Attachment Protein REceptor (SNAREs) crucial for cargo sorting • Membrane budding from donor organelle, and fusion with target organelle • Vesicle internal membrane proteins (v-SNAREs) join with target membrane proteins (t-SNAREs) Image credit: Molecular Cell Biology, Fifth Mariam Rizkallah - BIOT502 - Nov 15, 2011 Edition © 2003 W.H. Freeman and Company
  • 6. Introduction: Where to Go? • Rab (GTPase superfamily), and Rab-mediated docking • VAMP (vesicle-associated membrane protein) as type of v-SNAREs • Syntaxin (integral) and SNAP-25 (attached) as types of t-SNAREs • SNARE coiled-coil complexes • NSF-catalyzed hydrolysis of ATP and dissociation of the SNARE complexes Image credit: Molecular Cell Biology, Fifth Edition © 2003 W.H. Freeman and Company Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 7. The Trans-Golgi Network (TGN) •Extension of the trans-Golgi •Sorting station (proteins and lipids) •Golgins: regulate transport and maintain structure •Cargo is either: - Transported to lysosomes (mannose 6-phosphate receptor) - Packaged for secretion The intracellular structures known at the - Reside TNG (Golgins) Golgi complex are involved in protein •Problem: Which Golgin regulates processing and secretion. what transport? Image credits: Golgi - Biology Encyclopedia Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 8. Model for FIP1/RCP Function in Retrograde Transport Image credits: http://adoptamicrobe.blogspot.com/2006/06/escherichia-coli.html Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 9. Retrograde Transport of TNG38, STxB and VAMP4 • Major players: - Rab11: Retrograde transport regulation - Golgin-97: TNG’s t-SNAREs (GRIP domain and FIP1/RCP-binding/coiled-coil domain) - FIP1/RCP: RE’s v-SNAREs Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 10. Who Did It? • Identifying the major players through: - Knockdown of Rab11a/b or its interacting protein FIP1/RCP to prove that EE/RE –and not EE/LE— to TNG transport is Rab11-mediated [Control: ] - Investigation of FIP1/RCP direct binding to Golgin- 97 in vitro and in vivo to prove that binding is required for the retrograde transport from EE/RE – and not EE/LE— to the TGN [Control: CI-MPR6] Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 11. Results and Conclusions 1. Rab11 Is Required for the Localization of TGN38 to TGN Rationale: Investigation of the role of Rab11 Methods: HeLa cells-Tac-TNG38 transfected with siRNA against Rab11a and/or b Knockdown of both a/b resulted in: - Retention of TNG38 - Redistribution of FIP1/RCP to cytoplasm - Decrease in FIPs levels (FIP1/RCP and FIP5/Rip11) Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 12. Results: Rab11 Is Required for the Localization of TGN38 to TGN Immunoblotting Localization of FIP1/RCP Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 13. Results: Rab11 Is Required for the Localization of TGN38 to TGN E-G: Mock Staining With Antibodies H-J: FIP1/RCP Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 14. Results and Conclusions 2. FIP1/RCP Is Required for Retrograde TGN38 Transport Rationale: Investigation of role of different FIPs Methods: HeLa cells-Tac-TNG38 transfected with siRNA against Knockdown of FIP5/Rip11, FIP1/RCP, and FIP3 resulted in: - Redistribution of Tac-TGN38 from TGN to perinuclear punctuate organelles Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 15. Results: FIP1/RCP Is Required for Retrograde TGN38 Transport Immunoblotting Localization of FIP1/RCP Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 16. Results: FIP1/RCP Is Required for Retrograde TGN38 Transport C-E: Mock F-H: FIP1/RCP KD I-M: Higher magnification Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 17. Results: FIP1/RCP Is Required for Retrograde TGN38 Transport Slides from 17-29 were not prepared HeLa cells treated with either mock siRNA or FIP1/RCP siRNA Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 18. Mariam Rizkallah - BIOT502 - Nov 15, 2011
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  • 24. Mariam Rizkallah - BIOT502 - Nov 15, 2011
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  • 28. Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 29. Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 30. Conclusion 1. Identified Golgin-97 as binding partner for FIP1/RCP (Immunoppt and yeast two-hybrid and glutathione bead pulldown assays) 2. Knockdown results in accumulation of TGN38 in endocytic organelles containing the retromer complex (SNX1), EpsinR, and transferrin receptor. 3. Interaction between Golgin-97 and FIP1/RCP suggests that FIP1/RCP may act as a tethering factor, which mediates EE/RE-derived retrograde carrier docking and subsequent fusion at the TGN. Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 31. References • Jing, J., Junutula, J. R., Wu, C., Burden, J., Matern, H., Peden, A. A., & Prekeris, R. (2010). FIP1/RCP binding to Golgin-97 regulates retrograde transport from recycling endosomes to the trans-Golgi network. Molecular biology of the cell, 21(17), 3041-53. doi:10.1091/mbc.E10-04-0313 • Lee, M.-S., Cherla, R. P., & Tesh, V. L. (2010). Shiga Toxins: Intracellular Trafficking to the ER Leading to Activation of Host Cell Stress Responses. Toxins, 2(6), 1515-35. Molecular Diversity Preservation International. doi:10.3390/toxins2061515 Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 32. Questions Mariam Rizkallah - BIOT502 - Nov 15, 2011
  • 33. Mariam Rizkallah - BIOT502 - Nov 15, 2011

Editor's Notes

  1. STEC, HUS, assemble in ER, apoptosis
  2. Different cargo, different golgins