This study evaluated long-term outcomes of complete endoscopic stone removal versus incomplete stone removal with stent placement in 211 elderly patients aged 85 years or older with bile duct stones. Patients who underwent complete stone removal had a significantly higher overall survival rate but similar disease-specific survival rate compared to those who underwent incomplete stone removal. The proportion of patients with dementia was higher in the incomplete removal group. Complete stone removal can be safely performed in elderly patients, and advanced age should not preclude attempting full stone clearance.