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COMPARISON OF 3 MOLECULAR METHODS TO DETECT ANEUPLOIDIES  IN PRENATAL DIAGNOSIS Jeremie Gras*, Nathalie Lannoy, Xavier Pepermans, Marie Ravoet, Marianne Philippe   Center for Human Genetics, UCL Saint­Luc University, Brussels   (*Now at Clinique Saint­Luc Bouge)  ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Examples of results     47,XY,+18 using MLPA  47,XX,+21 using MAQ 47,XX,+21 using BoBs 3. Results: comparison with FISH Legend:  Not. Int: result that could not be interpreted Sample µ : insufficient sample [DNA] µ: insufficient DNA concentration ,[object Object],[object Object],[object Object],[object Object],[object Object],5. Sensitivity for mosaic detection   +21 mosaic study using BoBs   % of abnormal cells detected T21 – 50 % T21 – 40 % T21 – 30 % T21 – 20 % ,[object Object],[object Object],[object Object],[object Object],[object Object],BoBs, Di George BoBs, Williams Beurens ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Contact:   [email_address]   Luminex Genescan Genescan Separation of amplified products Yes NO NO CE Marking Yes NO NO Detection of micro deletions Yes Yes NO Triploid analysis +13, +18, +21 Aneusomies X,Y +13, +18, +21 Aneusomies X,Y +13, +18, +21 Aneusomies X,Y Aneuploidies detected PerkinElmer Multiplicon MRC-Holland Manufacturer Bacs-on-Beads MAQ assay  MLPA Normal 46,XY 46,XY 46,XY AF 10 Normal 46,XY 46,XY 46,XY AF 9 Normal 46,XY 46,XY 46,XY AF 8 Normal 46,XX 46,XX 46,XX AF 7  Normal 46,XY sample µ 46,XY AF 5 Normal 46,XX 46,XX 46,XX AF 4 Normal 46,XX 46,XX 46,XX AF 3 Normal 46,XY 46,XY 46,XY AF 2 FISH BoBs MAQ MLPA Normal 46,XY [ADN] µ [ADN] µ AF 20 Normal 46,XX Not int. 46,XX AF 19 +21 47,XY,+21 47,XY,+21 Not int. AF 18 Normal 46,XX 46,XX 46,XX AF 17  XXY 47,XXY 47,XXY 47,XXY AF 16 Normal 46,XY 46,XY 46,XY AF 15 Normal 46,XY 46,XY 46,XY AF 14 Normal 46,XY 46,XY 46,XY AF 13 Normal 46,XX 46,XX 46,XX AF 12 Normal 46,XX sample µ 46,XX AF 11 FISH BoBs MAQ MLPA Normal 46,XX 46,XX 46,XX AF 29 Normal 46,XX Not int. 46,XX AF 28 Normal 46,XY 46,XY 46,XY AF 27  Normal 46,XY 46,XY 46,XY AF 26 Normal sample µ sample µ 46,XX AF 25 Normal 46,XY Not int. 46,XY AF 24 Normal 46,XY 46,XY 46,XY AF 23 Normal 46,XY 46,XY 46,XY AF 22 Normal 46,XX 46,XX 46,XX AF 21 FISH BoBs MAQ MLPA Normal 46,XX 46,XX 46,XX AF 36 Normal 46,XY 46,XY 46,XY AF 35 Normal 46,XY 46,XY 46,XY AF 34 FISH BoBs MAQ MLPA Normal 46,XX 46,XX 46,XX CVS 10 47,XX,+21 47,XX,+21 47,XX,+21 Not. Int. CVS 9 Normal 46,XY 46,XY 46,XY CVS 8 Normal 46,XY 46,XY 46,XY CVS 7  Normal 46,XY 46,XY 46,XY CVS 6 Normal 46,XY 46,XY 46,XY CVS 5 47,XX,+21 47,XX,+21 47,XX,+21 47,XX,+21 CVS 4 45,XO 45,XO 45,XO 45,XO CVS 3 Normal 46,XX Not. Int. 46,XX CVS 2 47,XY, +18 47,XY, +18 Not. Int. 47,XX,+18 CVS 1 FISH BoBs MAQ MLPA Normal 46,XY 46,XY 46,XY CVS 17  Normal 46,XY 46,XY Not. Int. CVS 16 47,XX,+21 47,XX,+21 47,XX,+21 47,XX,+21 CVS 15 Normal 46,XX 46,XX 46,XX CVS 14 47,XY,+18 47,XX,+18 47,XX,+18 47,XX,+18 CVS 13 47,XY,+18 47,XY,+18 47,XY,+18 47,XY,+18 CVS 12 47,XX,+21 47,XX,+21 47,XX,+21 47,XX,+21 CVS 11 FISH BoBs MAQ MLPA 30 % 30 % 40 % XXY  mosaic 30 % 50% at the limit 50 % not detected  XXX  mosaic 30 % 40 %  50 % not detected  XO  mosaic 30 % 30 % 30 % XYY  mosaic 30 % 50 % 50 % not detected  +18 mosaic 20 % 50 % 50 % not detected  +21 mosaic BoBs MAQ MLPA

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J.Gras Aneuploidy 2011

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