El lunes y martes 20 y 21 de noviembre coordinamos un simposio internacional en la Fundación Ramón Areces, sobre los defectos del transporte de aminoácidos.
Prof. Sima Lev - The role of Nir proteins in phosphatidylinositol (PI) transp...Sima Lev
1) Nir proteins are involved in phosphatidylinositol transport between membranes and localizing to membrane contact sites.
2) Nir2 specifically functions at ER-Golgi and ER-plasma membrane contact sites to transport phosphatidylinositol between the membranes.
3) Nir2 interacts with VAP proteins and its localization and lipid transport activity is affected by mutations in VAP proteins, influencing membrane morphology and traffic.
Sima Lev: VAP-B and its role in Amyotrophic lateral sclerosis Sima Lev
VAP-B and its role in Amyotrophic lateral sclerosis
The document discusses VAP-B and its role in Amyotrophic lateral sclerosis (ALS). ALS is a neurodegenerative disorder characterized by motor neuron death. The P56S mutation in VAP-B has been linked to familial ALS and causes protein aggregation, ubiquitination, and insolubility. The mutation induces conformational changes in VAP-B that enhance oligomerization and prevent interaction with lipid transfer proteins, impairing membrane trafficking and lipid homeostasis. This leads to endoplasmic reticulum stress, proteasomal dysfunction, and motor neuron degeneration.
Discriminating Facts from Artefacts in the Secreted Ly-6 Protein FamilyChris Southan
The document discusses several issues related to accurately characterizing the secreted Ly-6 protein family based on bioinformatic analysis. It describes the discovery of novel rat Ly-6 proteins from urine samples and EST data, but also finds chimeric mRNA sequences that combined portions of unrelated genes with Ly-6 sequences, complicating the analysis. Genome mapping showed the chimeras did not represent real gene fusions but likely arose from artifacts. While many rat and mouse homologs were identified, clear orthologs between species were difficult to determine due to high sequence divergence over time.
This document discusses adrenoleukodystrophy (ALD), which is caused by mutations in the ABCD1 gene. The ABCD1 gene contains 10 exons and encodes a peroxisomal membrane protein involved in fatty acid metabolism. The study examines a patient with ALD caused by a splicing mutation, c.1780+2T>G, in the ABCD1 gene. Experiments such as PCR, RT-PCR, and bioinformatics analysis predict this mutation causes abnormal splicing. The results suggest the mutation leads to exon skipping or intron retention, preventing proper transcription of the ABCD1 gene and explaining the patient's lack of the ALD protein.
This research project studied post-translational modifications (PTMs) of nicotinamide phosphoribosyltransferase (NAMPT) through site-directed mutagenesis. NAMPT is the rate-limiting enzyme in the NAD+ salvage pathway. The document details the cloning of NAMPT cDNA into expression vectors, generation of point mutations at various PTM sites, expression and purification of mutant proteins, and initial analysis. Future work will involve further mutagenesis and characterization of the mutated NAMPT proteins to better understand how PTMs regulate NAMPT activity and NAD+ regeneration.
The document summarizes a study that investigated the role of glycosyltransferases in regulating leukocyte interactions with selectins. Key findings include:
1) A PSGL-1 variant called 19Fc containing a single O-glycan site was used to determine glycan distribution at the N-terminus of PSGL-1 via mass spectrometry. This found core-2 sLeX and disialylated T-antigen glycans.
2) Overexpression of ST6GalNAc-2 in HL-60 cells reduced sLeX expression and binding to P-, L-, and E-selectins, increasing rolling velocities.
3) ST6GalNAc-2 compet
The document discusses the functional interaction between mGlu1a and GABAB receptors. It first provides background on G protein-coupled receptors and their importance as drug targets. It then reviews evidence that mGlu1a and GABAB receptors physically interact in cortical neurons and Purkinje cells based on co-localization and co-immunoprecipitation studies. The study aims to further investigate the physical interaction between the receptors and the mechanism underlying their functional cross-talk using biophysical techniques like BRET, TR-FRET, and cell-surface co-immunoprecipitation. Preliminary data suggests mGlu1a and GABAB do not form complexes at the cell surface but may oligomerize intracellularly.
Prof. Sima Lev - The role of Nir proteins in phosphatidylinositol (PI) transp...Sima Lev
1) Nir proteins are involved in phosphatidylinositol transport between membranes and localizing to membrane contact sites.
2) Nir2 specifically functions at ER-Golgi and ER-plasma membrane contact sites to transport phosphatidylinositol between the membranes.
3) Nir2 interacts with VAP proteins and its localization and lipid transport activity is affected by mutations in VAP proteins, influencing membrane morphology and traffic.
Sima Lev: VAP-B and its role in Amyotrophic lateral sclerosis Sima Lev
VAP-B and its role in Amyotrophic lateral sclerosis
The document discusses VAP-B and its role in Amyotrophic lateral sclerosis (ALS). ALS is a neurodegenerative disorder characterized by motor neuron death. The P56S mutation in VAP-B has been linked to familial ALS and causes protein aggregation, ubiquitination, and insolubility. The mutation induces conformational changes in VAP-B that enhance oligomerization and prevent interaction with lipid transfer proteins, impairing membrane trafficking and lipid homeostasis. This leads to endoplasmic reticulum stress, proteasomal dysfunction, and motor neuron degeneration.
Discriminating Facts from Artefacts in the Secreted Ly-6 Protein FamilyChris Southan
The document discusses several issues related to accurately characterizing the secreted Ly-6 protein family based on bioinformatic analysis. It describes the discovery of novel rat Ly-6 proteins from urine samples and EST data, but also finds chimeric mRNA sequences that combined portions of unrelated genes with Ly-6 sequences, complicating the analysis. Genome mapping showed the chimeras did not represent real gene fusions but likely arose from artifacts. While many rat and mouse homologs were identified, clear orthologs between species were difficult to determine due to high sequence divergence over time.
This document discusses adrenoleukodystrophy (ALD), which is caused by mutations in the ABCD1 gene. The ABCD1 gene contains 10 exons and encodes a peroxisomal membrane protein involved in fatty acid metabolism. The study examines a patient with ALD caused by a splicing mutation, c.1780+2T>G, in the ABCD1 gene. Experiments such as PCR, RT-PCR, and bioinformatics analysis predict this mutation causes abnormal splicing. The results suggest the mutation leads to exon skipping or intron retention, preventing proper transcription of the ABCD1 gene and explaining the patient's lack of the ALD protein.
This research project studied post-translational modifications (PTMs) of nicotinamide phosphoribosyltransferase (NAMPT) through site-directed mutagenesis. NAMPT is the rate-limiting enzyme in the NAD+ salvage pathway. The document details the cloning of NAMPT cDNA into expression vectors, generation of point mutations at various PTM sites, expression and purification of mutant proteins, and initial analysis. Future work will involve further mutagenesis and characterization of the mutated NAMPT proteins to better understand how PTMs regulate NAMPT activity and NAD+ regeneration.
The document summarizes a study that investigated the role of glycosyltransferases in regulating leukocyte interactions with selectins. Key findings include:
1) A PSGL-1 variant called 19Fc containing a single O-glycan site was used to determine glycan distribution at the N-terminus of PSGL-1 via mass spectrometry. This found core-2 sLeX and disialylated T-antigen glycans.
2) Overexpression of ST6GalNAc-2 in HL-60 cells reduced sLeX expression and binding to P-, L-, and E-selectins, increasing rolling velocities.
3) ST6GalNAc-2 compet
The document discusses the functional interaction between mGlu1a and GABAB receptors. It first provides background on G protein-coupled receptors and their importance as drug targets. It then reviews evidence that mGlu1a and GABAB receptors physically interact in cortical neurons and Purkinje cells based on co-localization and co-immunoprecipitation studies. The study aims to further investigate the physical interaction between the receptors and the mechanism underlying their functional cross-talk using biophysical techniques like BRET, TR-FRET, and cell-surface co-immunoprecipitation. Preliminary data suggests mGlu1a and GABAB do not form complexes at the cell surface but may oligomerize intracellularly.
An increasing number of de novo missense variants have been identified in the GRIN family of genes encoding glutamate receptors, which play multiple roles in the central nervous system including mediation of a slow, calcium permeable component of synaptic transmission. This presentation will introduce the NMDA receptor family and summarize broadly what is known about the GRIN variants across multiple genes. The rationale underlying functional analysis both in vitro and in vivo will be presented, along with a snapshot of the procedures utilized by the Center for Functional Evaluation of Rare Variants. The terms “gain-of-function” and “loss-of-function” will be considered in the context of functional data, and specific data provided illustrating how these properties can vary with gene, location of the variant, and altered function among multiple properties of NMDA receptors.
Glycan Structural Analysis Throughout Biotherapeutic Development SGS
Glycosylation is a key structural and functional element found on a wide variety of biotherapeutics. As such, alterations in glycan profile can significantly affect the efficacy of a drug through, for example, half life in the bloodstream or biological activity as well as being a potential source of immunogenicity. The glycan profile can be selected and controlled through the choice of cell line as well as control of bioreactor conditions. The use of analytical techniques that provide structural data on this type of post translational modification are vital in the development and characterisation of biologics. Techniques in glycan structural characterisation are discussed in this presentation.
NMDA receptors play crucial roles in excitatory synaptic transmission. Rare variants in genes that encode receptor subunits are associated with several intractable neurodevelopmental disorders, including developmental and epileptic encephalopathy (DEE). To extend understanding of these intractable childhood diseases, we have begun to model these variants in laboratory mice.
Models studied so far are a constitutive knockin for GRIN2A variant p.Ser644Gly (S644G) based on one case, and a GRIN2D variant, p.Val667Ile (V667I), noted in at least three unrelated cases. Homozygous and heterozygous Grin2a S644G mice exhibit altered hippocampal morphology at 2 weeks, and homozygotes exhibit lethal tonic-clonic seizures in week 3. Heterozygotes have a normal lifespan without spontaneous seizures, but display a variety of distinct features including
resistance to electrically induced limbic seizures, as well as hyperactivity and repetitive and reduced anxiety behaviors. Multielectrode recordings of mutant neuronal networks reveal hyperexcitability and altered bursting and synchronicity of both mutant genotypes. When expressed in heterologous cells, mutant receptors exhibit enhanced NMDAR agonist potency and slow deactivation following rapid removal of glutamate, as occurs at synapses. Consistent with this, NMDAR-mediated synaptic currents in hippocampal slices from mutant mice show a prolonged deactivation time course. Standard antiepileptic drug monotherapy was ineffective in the patient, but combined treatment of NMDAR antagonists with antiepileptic drugs substantially reduced the seizure burden albeit without appreciable developmental improvement. Chronic treatment of homozygous mutant mouse pups with NMDAR antagonists delayed the onset of lethal seizures but did not prevent them.
Grin2d V667I knockin mice are at an earlier stage of study. In contrast to Grin2a S644G, V667I heterozygous mice are severely impaired and suffer from lethal tonic-clonic seizures with an onset from about 18 days to 3 months. The impairment precludes natural mating such that the line needs to be propagated by ovary transplantation. Young heterozygotes adults in video-EEG also exhibit very frequent interictal epileptiform spiking and spike-wave discharge activity, resembling absence seizures. Preliminary histology shows significant pyknotic nuclei appearing to evidence
cell death in the cerebral cortex. Pup developmental milestones, while not evidencing significant developmental delay, show unusual features including excessive maternal separation induced pup vocalization. Further studies are ongoing. Together these efforts illustrate the power of modelling severe neurodevelopmental seizure disorders using multiple experimental modalities and suggest their utility in identifying and evaluating new therapies.
Nicholas Young, Sphingosine 1-phosphate Receptor Subtype Influence over Gliob...Nicholas Young
My talk presenting my thesis work per invitation of Research and Development Division of Genzyme Corporation to the Lipid Storage Disorders Department. October 5, 2007. Boston, MA: "Sphingosine 1-phosphate Receptor Subtype Influence over Glioblastoma Multiforme Pathology". My PhD was earned through the Integrated Biomedical Sciences, September 2007, The Ohio State University, College of Medicine Columbus, OH. Area of focus for my PhD: Biochemical and Molecular Disease Mechanisms. Dissertation title: Sphingosine 1-phosphate Receptor Subtype Influence Over Glioblastoma Multiforme Malignant Behavior"
1) The document examines how elevating O-GlcNAc levels through OGA inhibition or increasing OGT substrate availability affects mitochondrial function.
2) Experiments found that elevated O-GlcNAc levels decreased mitochondrial respiration and ATP production, while reducing reactive oxygen species levels.
3) Pathway analysis predicted that the NRF2-mediated oxidative stress response, a key regulator of antioxidants, was downregulated with elevated O-GlcNAc. Protein expression of antioxidant genes regulated by NRF2, such as TXNRD1, were also reduced.
4) Together, the results demonstrate that prolonged alterations to cellular O-GlcNAc homeostasis impact mitochondrial function and metabolism.
This document discusses the roles of O-linked β-N-acetylglucosamine (O-GlcNAc) in physiology and the analytical challenges of studying it. O-GlcNAc is a post-translational modification found on nuclear and cytosolic proteins that is involved in nutrient sensing and the regulation of many cellular processes. It has extensive crosstalk with phosphorylation and over 3000 protein sites have been mapped to date. Increased global O-GlcNAcylation, even over just 2.5 hours, affects the occupancy of nearly every phosphorylated site that is actively cycling. Many kinases are also regulated by O-GlcNAcylation, with over 40 synaptic kinases identified as being O-
El lunes y martes 20 y 21 de noviembre coordinamos un simposio internacional en la Fundación Ramón Areces, sobre los defectos del transporte de aminoácidos.
GC1 mutations can cause early epileptic encephalopathies. The document discusses:
1) GC1 mutations have been found in children with early epileptic encephalopathies and suppression bursts. GC1 is the mitochondrial glutamate carrier that transports glutamate into mitochondria.
2) Inactivating GC1 in astrocyte cultures leads to decreased NADH production, impaired mitochondrial membrane potential activation by glutamate, and decreased ATP levels.
3) This suggests GC1 is crucial for astrocyte glutamate metabolism and mitochondrial function, and its deficiency may cause excitotoxicity through impaired glutamate clearance from the extracellular space.
N-methyl-D-aspartate receptors (NMDARs) mediate a slow component of excitatory synaptic transmission that plays important roles in normal brain function and development. A large number of disease-associated variants in the GRIN gene family encoding NMDAR GluN subunits have been identified in patients with various neurological and neuropsychiatric disorders. Many of these variants reduce the function of NMDARs by a range of different mechanisms, including
reduced glutamate potency, reduced glycine potency, accelerated deactivation time course, reduced current response amplitude, decreased surface expression, and/or reduced open probability. This talk will focus on three positive allosteric modulators of NMDAR receptor function (24(S)-hydroxycholesterol, pregnenolone sulfate, tobramycin) and two co-agonists (D-serine and D-cycloserine) on their ability to mitigate the diminished function of NMDARs harboring GRIN variants. We examined the effects of these modulators on NMDARs that contained 24 different loss-of-function missense variants in GRIN1, GRIN2A, or GRIN2B. The clinical phenotypes of the patients hosting these variants include epilepsy/seizures and/or developmental delay/intellectual disability. Some patients have autistic behavior or show symptoms of ADHD. For all variants, some aspect of the
reduced function was partially restored. Moreover, some variants showed enhanced sensitivity to positive allosteric modulators compared to wild type receptors. These results raise the possibility that enhancement of NMDAR function by positive allosteric modulators may be a useful therapeutic strategy.
RNA splicing mutations and human disease: Pompe disease - Emanuele Buratti
Convegno del 25 novembre "Diagnosi e management della glicogenosi tipo 2" - Centro di coordinamento regionale malattie rare FVG
This summary provides an overview of a study that characterized the kinetics of nicotinamide phosphoribosyltransferase (Nampt), an enzyme involved in the NAD+ salvage pathway. The researchers developed a fluorescence-based assay to monitor Nampt activity and its inhibition by FK866. They determined the kinetic parameters Km, Kcat, and Kcat/Km for wild type Nampt and mutants, finding the Y188F mutant lacked activity. Preliminary data confirmed FK866 inhibition of Nampt in a dose-dependent manner, with an IC50 of 1.204 μM. Future work will further validate mutant kinetics and inhibition controls.
Final Activity Nampt Poster Summer 2012Katelyn Pina
This study aimed to characterize the kinetics of nicotinamide phosphoribosyltransferase (Nampt) and the effects of mutations on its activity. A fluorescence-based assay was optimized to monitor Nampt's reaction and generate Michaelis-Menten kinetics. Preliminary data showed wild-type Nampt could be inhibited by FK866 as expected. The Y188F mutant lacked activity, confirming the importance of that residue, while the Y188D mutant showed activity reduction. Further experiments are needed to fully analyze the kinetics of wild-type and mutant Nampt.
Glutamatergic neurotransmission involves glutamate, the major excitatory neurotransmitter in the brain. There are two pathways for glutamate synthesis from precursors and multiple receptor types including NMDA, AMPA, KA, and metabotropic receptors. The different receptor subunits provide diversity in function. Glutamate signaling is involved in many brain pathways and clinical implications include roles in schizophrenia, Parkinson's disease, and drug mechanisms of action.
Los días 20 y 21 de octubre de 2016, la Fundacion Ramón Areces organizó un simposio internacional para analizar las 'Enfermedades raras de la piel: de la clínica al gen y viceversa'. El doctor Fernando Larcher Laguzzi, del CIEMAT-Universidad Carlos III de Madrid-IIS Fundación Jiménez Díaz, ejerció de coordinador.
N-acetyl-D-glucosamine kinase (NAGK) interacts with dynein light-chain roadblock type 1 (DYNLRB1) at dendritic branch points in neurons. Immunocytochemistry and proximity ligation assays showed colocalization of NAGK and DYNLRB1 on microtubule fibers at dendritic branches. NAGK was also found to interact with Golgi outposts and DYNLRB1 at branch points, indicating a tripartite interaction between NAGK, dynein, and Golgi that regulates dendritic growth and branching. Introduction of a peptide derived from DYNLRB1 stunted dendrite development in cultured neurons.
Advances in LC/MS methodologies for the characterisation of complex glycoprot...Quality Assistance s.a.
Dr. Arnaud Delobel from Quality Assistance spoke on "Advances in LC/MS methodologies for the characterisation of complex glycoproteins (case study: Etanercept)" at the "Challenges and Opportunities in Protein Analytics" day in Brussels.
For more information on our expertise and services, visit: www.quality-assistance.com
Follow us on social media:
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Facebook: https://www.facebook.com/QualityAssistanceBelgium
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Quality Assistance S.A. is a leading European Contract Research Organisation providing the pharmaceutical industry with all the analytical services required by EMA and FDA regulations for the development and marketing of innovative human medicinal products.
We assist our clients from candidate selection, through non-clinical and clinical studies, to marketing authorisation, using our state-of-the-art, product-dedicated expertise in analytical sciences.
For each customer and each project, we design customised solutions, define analytical protocols, develop and validate specific new analytical methods and perform characterisation, stability, pharmacokinetic, biomarker and immunogenicity studies as well as batch release testing, in order to evaluate the Quality, Safety and Efficacy of the given drugs.
1) A transposon sequencing screen identified the citrate synthase gene gltA as having decreased abundance in wild-type mice lungs but not in Lcn2-/- mice during Klebsiella pneumoniae infection, suggesting an interaction between gltA and murine Lcn2.
2) Validation experiments showed a gltA mutant strain had a significant fitness defect compared to the wild type in wild-type mice but not in Lcn2-/- mice. The gltA mutant grew similarly to wild type in rich media but not in minimal media, and growth was restored by glutamate or human serum supplementation.
3) Further experiments showed the gltA mutant had a defect in the spleen
GAPDH, a well-known glycolytic enzyme, mediatesPei-Ju Chin
This document proposes experiments to investigate how the glycolytic enzyme GAPDH (TDH3 in yeast) mediates apoptosis through epigenetic mechanisms. The first aim is to test if the protein interaction between SET and GAPDH regulates caspase-independent apoptosis by regulating granzyme A activity. The second aim is to determine if GAPDH-mediated expression of histone H2B, influenced by redox status, exerts apoptotic potential in cadmium-stressed yeast cells. Experiments include in vitro and in vivo assays of granzyme A activity and use of yeast mutants and complementation to assess the roles of TDH3, SET and H2B in apoptosis.
Drosophila (fruit flies) are commonly used as a model for neural development research due to several advantages: they are inexpensive to culture, have a small and well-known genome, a short lifecycle, and many genetic tools available. Thomas Hunt Morgan established Drosophila as a genetic model in the early 1900s and won the 1933 Nobel Prize for this work. The Drosophila genome was fully sequenced in 2000, aiding further research. Drosophila have a 10-day lifecycle and well-studied embryonic neural development and neuroblast mapping. Genetic tools like P-element insertions and the UAS-GAL4 system allow for gene overexpression and knockdown experiments. Drosophila research has provided insights into neural pathways, phot
GABAergic control of excitatory input to striatal spiny projection neurons (S...Maximilian Darrah
This study examined GABAergic control of striatal projection neurons (SPNs) using calcium imaging in mouse brain slices. The results showed that inhibitory GABA inputs modulate excitatory responses in SPNs, with a stronger effect in indirect pathway SPNs expressing D2 receptors compared to direct pathway SPNs expressing D1 receptors. Application of the GABAA receptor antagonist gabazine increased calcium transients more in D2 SPNs, while the benzodiazepine diazepam inhibited responses in D2 but not D1 SPNs. These findings provide insights into how GABA signaling differentially regulates the two output pathways of the basal ganglia to control movement.
Jordi Torren - Coordinador del proyecto ESVAC. Agencia Europea de Medicamento...Fundación Ramón Areces
El martes 5 de junio del 2018 organizamos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre el consumo de antibióticos y transmisión de resistencia entre humanos y animales.
Dominique L. Monnet Director del programa ARHAI (Antimicrobial Resistance an...Fundación Ramón Areces
El martes 5 de junio del 2018 organizamos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre el consumo de antibióticos y transmisión de resistencia entre humanos y animales.
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Similar to Francisco Zafra Centro de Biologia Molecular Severo Ochoa. CSIC-UAM.
An increasing number of de novo missense variants have been identified in the GRIN family of genes encoding glutamate receptors, which play multiple roles in the central nervous system including mediation of a slow, calcium permeable component of synaptic transmission. This presentation will introduce the NMDA receptor family and summarize broadly what is known about the GRIN variants across multiple genes. The rationale underlying functional analysis both in vitro and in vivo will be presented, along with a snapshot of the procedures utilized by the Center for Functional Evaluation of Rare Variants. The terms “gain-of-function” and “loss-of-function” will be considered in the context of functional data, and specific data provided illustrating how these properties can vary with gene, location of the variant, and altered function among multiple properties of NMDA receptors.
Glycan Structural Analysis Throughout Biotherapeutic Development SGS
Glycosylation is a key structural and functional element found on a wide variety of biotherapeutics. As such, alterations in glycan profile can significantly affect the efficacy of a drug through, for example, half life in the bloodstream or biological activity as well as being a potential source of immunogenicity. The glycan profile can be selected and controlled through the choice of cell line as well as control of bioreactor conditions. The use of analytical techniques that provide structural data on this type of post translational modification are vital in the development and characterisation of biologics. Techniques in glycan structural characterisation are discussed in this presentation.
NMDA receptors play crucial roles in excitatory synaptic transmission. Rare variants in genes that encode receptor subunits are associated with several intractable neurodevelopmental disorders, including developmental and epileptic encephalopathy (DEE). To extend understanding of these intractable childhood diseases, we have begun to model these variants in laboratory mice.
Models studied so far are a constitutive knockin for GRIN2A variant p.Ser644Gly (S644G) based on one case, and a GRIN2D variant, p.Val667Ile (V667I), noted in at least three unrelated cases. Homozygous and heterozygous Grin2a S644G mice exhibit altered hippocampal morphology at 2 weeks, and homozygotes exhibit lethal tonic-clonic seizures in week 3. Heterozygotes have a normal lifespan without spontaneous seizures, but display a variety of distinct features including
resistance to electrically induced limbic seizures, as well as hyperactivity and repetitive and reduced anxiety behaviors. Multielectrode recordings of mutant neuronal networks reveal hyperexcitability and altered bursting and synchronicity of both mutant genotypes. When expressed in heterologous cells, mutant receptors exhibit enhanced NMDAR agonist potency and slow deactivation following rapid removal of glutamate, as occurs at synapses. Consistent with this, NMDAR-mediated synaptic currents in hippocampal slices from mutant mice show a prolonged deactivation time course. Standard antiepileptic drug monotherapy was ineffective in the patient, but combined treatment of NMDAR antagonists with antiepileptic drugs substantially reduced the seizure burden albeit without appreciable developmental improvement. Chronic treatment of homozygous mutant mouse pups with NMDAR antagonists delayed the onset of lethal seizures but did not prevent them.
Grin2d V667I knockin mice are at an earlier stage of study. In contrast to Grin2a S644G, V667I heterozygous mice are severely impaired and suffer from lethal tonic-clonic seizures with an onset from about 18 days to 3 months. The impairment precludes natural mating such that the line needs to be propagated by ovary transplantation. Young heterozygotes adults in video-EEG also exhibit very frequent interictal epileptiform spiking and spike-wave discharge activity, resembling absence seizures. Preliminary histology shows significant pyknotic nuclei appearing to evidence
cell death in the cerebral cortex. Pup developmental milestones, while not evidencing significant developmental delay, show unusual features including excessive maternal separation induced pup vocalization. Further studies are ongoing. Together these efforts illustrate the power of modelling severe neurodevelopmental seizure disorders using multiple experimental modalities and suggest their utility in identifying and evaluating new therapies.
Nicholas Young, Sphingosine 1-phosphate Receptor Subtype Influence over Gliob...Nicholas Young
My talk presenting my thesis work per invitation of Research and Development Division of Genzyme Corporation to the Lipid Storage Disorders Department. October 5, 2007. Boston, MA: "Sphingosine 1-phosphate Receptor Subtype Influence over Glioblastoma Multiforme Pathology". My PhD was earned through the Integrated Biomedical Sciences, September 2007, The Ohio State University, College of Medicine Columbus, OH. Area of focus for my PhD: Biochemical and Molecular Disease Mechanisms. Dissertation title: Sphingosine 1-phosphate Receptor Subtype Influence Over Glioblastoma Multiforme Malignant Behavior"
1) The document examines how elevating O-GlcNAc levels through OGA inhibition or increasing OGT substrate availability affects mitochondrial function.
2) Experiments found that elevated O-GlcNAc levels decreased mitochondrial respiration and ATP production, while reducing reactive oxygen species levels.
3) Pathway analysis predicted that the NRF2-mediated oxidative stress response, a key regulator of antioxidants, was downregulated with elevated O-GlcNAc. Protein expression of antioxidant genes regulated by NRF2, such as TXNRD1, were also reduced.
4) Together, the results demonstrate that prolonged alterations to cellular O-GlcNAc homeostasis impact mitochondrial function and metabolism.
This document discusses the roles of O-linked β-N-acetylglucosamine (O-GlcNAc) in physiology and the analytical challenges of studying it. O-GlcNAc is a post-translational modification found on nuclear and cytosolic proteins that is involved in nutrient sensing and the regulation of many cellular processes. It has extensive crosstalk with phosphorylation and over 3000 protein sites have been mapped to date. Increased global O-GlcNAcylation, even over just 2.5 hours, affects the occupancy of nearly every phosphorylated site that is actively cycling. Many kinases are also regulated by O-GlcNAcylation, with over 40 synaptic kinases identified as being O-
El lunes y martes 20 y 21 de noviembre coordinamos un simposio internacional en la Fundación Ramón Areces, sobre los defectos del transporte de aminoácidos.
GC1 mutations can cause early epileptic encephalopathies. The document discusses:
1) GC1 mutations have been found in children with early epileptic encephalopathies and suppression bursts. GC1 is the mitochondrial glutamate carrier that transports glutamate into mitochondria.
2) Inactivating GC1 in astrocyte cultures leads to decreased NADH production, impaired mitochondrial membrane potential activation by glutamate, and decreased ATP levels.
3) This suggests GC1 is crucial for astrocyte glutamate metabolism and mitochondrial function, and its deficiency may cause excitotoxicity through impaired glutamate clearance from the extracellular space.
N-methyl-D-aspartate receptors (NMDARs) mediate a slow component of excitatory synaptic transmission that plays important roles in normal brain function and development. A large number of disease-associated variants in the GRIN gene family encoding NMDAR GluN subunits have been identified in patients with various neurological and neuropsychiatric disorders. Many of these variants reduce the function of NMDARs by a range of different mechanisms, including
reduced glutamate potency, reduced glycine potency, accelerated deactivation time course, reduced current response amplitude, decreased surface expression, and/or reduced open probability. This talk will focus on three positive allosteric modulators of NMDAR receptor function (24(S)-hydroxycholesterol, pregnenolone sulfate, tobramycin) and two co-agonists (D-serine and D-cycloserine) on their ability to mitigate the diminished function of NMDARs harboring GRIN variants. We examined the effects of these modulators on NMDARs that contained 24 different loss-of-function missense variants in GRIN1, GRIN2A, or GRIN2B. The clinical phenotypes of the patients hosting these variants include epilepsy/seizures and/or developmental delay/intellectual disability. Some patients have autistic behavior or show symptoms of ADHD. For all variants, some aspect of the
reduced function was partially restored. Moreover, some variants showed enhanced sensitivity to positive allosteric modulators compared to wild type receptors. These results raise the possibility that enhancement of NMDAR function by positive allosteric modulators may be a useful therapeutic strategy.
RNA splicing mutations and human disease: Pompe disease - Emanuele Buratti
Convegno del 25 novembre "Diagnosi e management della glicogenosi tipo 2" - Centro di coordinamento regionale malattie rare FVG
This summary provides an overview of a study that characterized the kinetics of nicotinamide phosphoribosyltransferase (Nampt), an enzyme involved in the NAD+ salvage pathway. The researchers developed a fluorescence-based assay to monitor Nampt activity and its inhibition by FK866. They determined the kinetic parameters Km, Kcat, and Kcat/Km for wild type Nampt and mutants, finding the Y188F mutant lacked activity. Preliminary data confirmed FK866 inhibition of Nampt in a dose-dependent manner, with an IC50 of 1.204 μM. Future work will further validate mutant kinetics and inhibition controls.
Final Activity Nampt Poster Summer 2012Katelyn Pina
This study aimed to characterize the kinetics of nicotinamide phosphoribosyltransferase (Nampt) and the effects of mutations on its activity. A fluorescence-based assay was optimized to monitor Nampt's reaction and generate Michaelis-Menten kinetics. Preliminary data showed wild-type Nampt could be inhibited by FK866 as expected. The Y188F mutant lacked activity, confirming the importance of that residue, while the Y188D mutant showed activity reduction. Further experiments are needed to fully analyze the kinetics of wild-type and mutant Nampt.
Glutamatergic neurotransmission involves glutamate, the major excitatory neurotransmitter in the brain. There are two pathways for glutamate synthesis from precursors and multiple receptor types including NMDA, AMPA, KA, and metabotropic receptors. The different receptor subunits provide diversity in function. Glutamate signaling is involved in many brain pathways and clinical implications include roles in schizophrenia, Parkinson's disease, and drug mechanisms of action.
Los días 20 y 21 de octubre de 2016, la Fundacion Ramón Areces organizó un simposio internacional para analizar las 'Enfermedades raras de la piel: de la clínica al gen y viceversa'. El doctor Fernando Larcher Laguzzi, del CIEMAT-Universidad Carlos III de Madrid-IIS Fundación Jiménez Díaz, ejerció de coordinador.
N-acetyl-D-glucosamine kinase (NAGK) interacts with dynein light-chain roadblock type 1 (DYNLRB1) at dendritic branch points in neurons. Immunocytochemistry and proximity ligation assays showed colocalization of NAGK and DYNLRB1 on microtubule fibers at dendritic branches. NAGK was also found to interact with Golgi outposts and DYNLRB1 at branch points, indicating a tripartite interaction between NAGK, dynein, and Golgi that regulates dendritic growth and branching. Introduction of a peptide derived from DYNLRB1 stunted dendrite development in cultured neurons.
Advances in LC/MS methodologies for the characterisation of complex glycoprot...Quality Assistance s.a.
Dr. Arnaud Delobel from Quality Assistance spoke on "Advances in LC/MS methodologies for the characterisation of complex glycoproteins (case study: Etanercept)" at the "Challenges and Opportunities in Protein Analytics" day in Brussels.
For more information on our expertise and services, visit: www.quality-assistance.com
Follow us on social media:
LinkedIn: https://www.linkedin.com/company/quality-assistance
Twitter: https://twitter.com/QA_Belgium
Facebook: https://www.facebook.com/QualityAssistanceBelgium
Google +: https://plus.google.com/103676189647965359292
Quality Assistance S.A. is a leading European Contract Research Organisation providing the pharmaceutical industry with all the analytical services required by EMA and FDA regulations for the development and marketing of innovative human medicinal products.
We assist our clients from candidate selection, through non-clinical and clinical studies, to marketing authorisation, using our state-of-the-art, product-dedicated expertise in analytical sciences.
For each customer and each project, we design customised solutions, define analytical protocols, develop and validate specific new analytical methods and perform characterisation, stability, pharmacokinetic, biomarker and immunogenicity studies as well as batch release testing, in order to evaluate the Quality, Safety and Efficacy of the given drugs.
1) A transposon sequencing screen identified the citrate synthase gene gltA as having decreased abundance in wild-type mice lungs but not in Lcn2-/- mice during Klebsiella pneumoniae infection, suggesting an interaction between gltA and murine Lcn2.
2) Validation experiments showed a gltA mutant strain had a significant fitness defect compared to the wild type in wild-type mice but not in Lcn2-/- mice. The gltA mutant grew similarly to wild type in rich media but not in minimal media, and growth was restored by glutamate or human serum supplementation.
3) Further experiments showed the gltA mutant had a defect in the spleen
GAPDH, a well-known glycolytic enzyme, mediatesPei-Ju Chin
This document proposes experiments to investigate how the glycolytic enzyme GAPDH (TDH3 in yeast) mediates apoptosis through epigenetic mechanisms. The first aim is to test if the protein interaction between SET and GAPDH regulates caspase-independent apoptosis by regulating granzyme A activity. The second aim is to determine if GAPDH-mediated expression of histone H2B, influenced by redox status, exerts apoptotic potential in cadmium-stressed yeast cells. Experiments include in vitro and in vivo assays of granzyme A activity and use of yeast mutants and complementation to assess the roles of TDH3, SET and H2B in apoptosis.
Drosophila (fruit flies) are commonly used as a model for neural development research due to several advantages: they are inexpensive to culture, have a small and well-known genome, a short lifecycle, and many genetic tools available. Thomas Hunt Morgan established Drosophila as a genetic model in the early 1900s and won the 1933 Nobel Prize for this work. The Drosophila genome was fully sequenced in 2000, aiding further research. Drosophila have a 10-day lifecycle and well-studied embryonic neural development and neuroblast mapping. Genetic tools like P-element insertions and the UAS-GAL4 system allow for gene overexpression and knockdown experiments. Drosophila research has provided insights into neural pathways, phot
GABAergic control of excitatory input to striatal spiny projection neurons (S...Maximilian Darrah
This study examined GABAergic control of striatal projection neurons (SPNs) using calcium imaging in mouse brain slices. The results showed that inhibitory GABA inputs modulate excitatory responses in SPNs, with a stronger effect in indirect pathway SPNs expressing D2 receptors compared to direct pathway SPNs expressing D1 receptors. Application of the GABAA receptor antagonist gabazine increased calcium transients more in D2 SPNs, while the benzodiazepine diazepam inhibited responses in D2 but not D1 SPNs. These findings provide insights into how GABA signaling differentially regulates the two output pathways of the basal ganglia to control movement.
Similar to Francisco Zafra Centro de Biologia Molecular Severo Ochoa. CSIC-UAM. (20)
Jordi Torren - Coordinador del proyecto ESVAC. Agencia Europea de Medicamento...Fundación Ramón Areces
El martes 5 de junio del 2018 organizamos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre el consumo de antibióticos y transmisión de resistencia entre humanos y animales.
Dominique L. Monnet Director del programa ARHAI (Antimicrobial Resistance an...Fundación Ramón Areces
El martes 5 de junio del 2018 organizamos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre el consumo de antibióticos y transmisión de resistencia entre humanos y animales.
El jueves 24 de mayo del 2018 organizamos una Conferencia con Antonio Cabrales en la Fundación Ramón Areces. Una conferencia en la cual el tema fue: Estilo negociador y confianza, ¿hay diferencias entre hombres y mujeres?
Teresa Puig - Institut de Ciència de Materials de Barcelona, ICMAB-CSIC, Espa...Fundación Ramón Areces
El lunes y martes 21 y 22 de mayo del 2018 realizamos un Simposio Internacional en la Fundación Ramón Areces, tratando el tema de la superconductividad y presión: una relación fructífera en el camino hacia la superconductividad a temperatura ambiente.
Elena Bascones - Instituto de Ciencia de Materiales de Madrid (ICMM-CSIC), Es...Fundación Ramón Areces
El lunes y martes 21 y 22 de mayo del 2018 realizamos un Simposio Internacional en la Fundación Ramón Areces, tratando el tema de la superconductividad y presión: una relación fructífera en el camino hacia la superconductividad a temperatura ambiente.
El jueves 17 de mayo del 2018 se organizó una Mesa Redonda en la Fundación Ramón Areces, en la cual se habló sobre las subidas de tipos en la era Trump y la nueva globalización.
El jueves 17 de mayo del 2018 se organizó una Mesa Redonda en la Fundación Ramón Areces, en la cual se habló sobre las subidas de tipos en la era Trump y la nueva globalización.
El miércoles 16 de mayo del 2018 celebramos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre las nuevas fronteras de investigación sobre la distribución comercial y el comportamiento del consumidor.
El miércoles 16 de mayo del 2018 celebramos una Jornada en la Fundación Ramón Areces, en la cual se habló sobre las nuevas fronteras de investigación sobre la distribución comercial y el comportamiento del consumidor.
Juan Carlos López-Gutiérrez - Unidad de Anomalías Vasculares, Hospital Unive...Fundación Ramón Areces
El jueves y viernes 10 y 11 de mayo del 2018 realizamos en la Fundación Ramón Areces un Simposio Internacional, en el cual se trató el tema del mosaicismo somático en malformaciones vasculares.
Víctor Martínez-Glez. - Instituto de Genética Médica y Molecular (INGEMM). I...Fundación Ramón Areces
El jueves y viernes 10 y 11 de mayo del 2018 realizamos en la Fundación Ramón Areces un Simposio Internacional, en el cual se trató el tema del mosaicismo somático en malformaciones vasculares.
Rudolf Happle - Dermatología, University of Freiburg Medical Center, Freiburg...Fundación Ramón Areces
El jueves y viernes 10 y 11 de mayo del 2018 realizamos en la Fundación Ramón Areces un Simposio Internacional, en el cual se trató el tema del mosaicismo somático en malformaciones vasculares.
Rafael Doménech - Responsable de Análisis Macroeconómico, BBVA Research. Fundación Ramón Areces
El martes 8 de mayo de 2018 realizamos una conferencia en la Fundación Ramón Areces, en la cual se habló sobre el futuro de las pensiones: una visión global.
El martes 8 de mayo de 2018 realizamos una conferencia en la Fundación Ramón Areces, en la cual se habló sobre el futuro de las pensiones: una visión global.
El martes 8 de mayo de 2018 realizamos una conferencia en la Fundación Ramón Areces, en la cual se habló sobre el futuro de las pensiones: una visión global.
Nicholas Barr - Profesor de Economía Pública, London School of Economics. Fundación Ramón Areces
El martes 8 de mayo de 2018 realizamos una conferencia en la Fundación Ramón Areces, en la cual se habló sobre el futuro de las pensiones: una visión global.
El viernes 27 de abril del 2018 se celebró en la Fundación Ramón Areces una Jornada sobre física , en la cual se trataron diversos temas como: Los materiales mecanocalóricos, magnetísmo, biofísica, la energía oscura y instrumentación astronómica.
El viernes 20 de abril organizamos una Jornada sobre la ciencia en el corazón de Europa, en colaboración con Científicos Españoles en Bélgica (CEBE) y realizada en la Fundación Ramón Areces.
Marta Olivares - Investigadora Postdoctoral en Université catholique de Louva...Fundación Ramón Areces
El viernes 20 de abril organizamos una Jornada sobre la ciencia en el corazón de Europa, en colaboración con Científicos Españoles en Bélgica (CEBE) y realizada en la Fundación Ramón Areces.
El viernes 20 de abril organizamos una Jornada sobre la ciencia en el corazón de Europa, en colaboración con Científicos Españoles en Bélgica (CEBE) y realizada en la Fundación Ramón Areces.
Discovery of An Apparent Red, High-Velocity Type Ia Supernova at 𝐳 = 2.9 wi...Sérgio Sacani
We present the JWST discovery of SN 2023adsy, a transient object located in a host galaxy JADES-GS
+
53.13485
−
27.82088
with a host spectroscopic redshift of
2.903
±
0.007
. The transient was identified in deep James Webb Space Telescope (JWST)/NIRCam imaging from the JWST Advanced Deep Extragalactic Survey (JADES) program. Photometric and spectroscopic followup with NIRCam and NIRSpec, respectively, confirm the redshift and yield UV-NIR light-curve, NIR color, and spectroscopic information all consistent with a Type Ia classification. Despite its classification as a likely SN Ia, SN 2023adsy is both fairly red (
�
(
�
−
�
)
∼
0.9
) despite a host galaxy with low-extinction and has a high Ca II velocity (
19
,
000
±
2
,
000
km/s) compared to the general population of SNe Ia. While these characteristics are consistent with some Ca-rich SNe Ia, particularly SN 2016hnk, SN 2023adsy is intrinsically brighter than the low-
�
Ca-rich population. Although such an object is too red for any low-
�
cosmological sample, we apply a fiducial standardization approach to SN 2023adsy and find that the SN 2023adsy luminosity distance measurement is in excellent agreement (
≲
1
�
) with
Λ
CDM. Therefore unlike low-
�
Ca-rich SNe Ia, SN 2023adsy is standardizable and gives no indication that SN Ia standardized luminosities change significantly with redshift. A larger sample of distant SNe Ia is required to determine if SN Ia population characteristics at high-
�
truly diverge from their low-
�
counterparts, and to confirm that standardized luminosities nevertheless remain constant with redshift.
Authoring a personal GPT for your research and practice: How we created the Q...Leonel Morgado
Thematic analysis in qualitative research is a time-consuming and systematic task, typically done using teams. Team members must ground their activities on common understandings of the major concepts underlying the thematic analysis, and define criteria for its development. However, conceptual misunderstandings, equivocations, and lack of adherence to criteria are challenges to the quality and speed of this process. Given the distributed and uncertain nature of this process, we wondered if the tasks in thematic analysis could be supported by readily available artificial intelligence chatbots. Our early efforts point to potential benefits: not just saving time in the coding process but better adherence to criteria and grounding, by increasing triangulation between humans and artificial intelligence. This tutorial will provide a description and demonstration of the process we followed, as two academic researchers, to develop a custom ChatGPT to assist with qualitative coding in the thematic data analysis process of immersive learning accounts in a survey of the academic literature: QUAL-E Immersive Learning Thematic Analysis Helper. In the hands-on time, participants will try out QUAL-E and develop their ideas for their own qualitative coding ChatGPT. Participants that have the paid ChatGPT Plus subscription can create a draft of their assistants. The organizers will provide course materials and slide deck that participants will be able to utilize to continue development of their custom GPT. The paid subscription to ChatGPT Plus is not required to participate in this workshop, just for trying out personal GPTs during it.
SDSS1335+0728: The awakening of a ∼ 106M⊙ black hole⋆Sérgio Sacani
Context. The early-type galaxy SDSS J133519.91+072807.4 (hereafter SDSS1335+0728), which had exhibited no prior optical variations during the preceding two decades, began showing significant nuclear variability in the Zwicky Transient Facility (ZTF) alert stream from December 2019 (as ZTF19acnskyy). This variability behaviour, coupled with the host-galaxy properties, suggests that SDSS1335+0728 hosts a ∼ 106M⊙ black hole (BH) that is currently in the process of ‘turning on’. Aims. We present a multi-wavelength photometric analysis and spectroscopic follow-up performed with the aim of better understanding the origin of the nuclear variations detected in SDSS1335+0728. Methods. We used archival photometry (from WISE, 2MASS, SDSS, GALEX, eROSITA) and spectroscopic data (from SDSS and LAMOST) to study the state of SDSS1335+0728 prior to December 2019, and new observations from Swift, SOAR/Goodman, VLT/X-shooter, and Keck/LRIS taken after its turn-on to characterise its current state. We analysed the variability of SDSS1335+0728 in the X-ray/UV/optical/mid-infrared range, modelled its spectral energy distribution prior to and after December 2019, and studied the evolution of its UV/optical spectra. Results. From our multi-wavelength photometric analysis, we find that: (a) since 2021, the UV flux (from Swift/UVOT observations) is four times brighter than the flux reported by GALEX in 2004; (b) since June 2022, the mid-infrared flux has risen more than two times, and the W1−W2 WISE colour has become redder; and (c) since February 2024, the source has begun showing X-ray emission. From our spectroscopic follow-up, we see that (i) the narrow emission line ratios are now consistent with a more energetic ionising continuum; (ii) broad emission lines are not detected; and (iii) the [OIII] line increased its flux ∼ 3.6 years after the first ZTF alert, which implies a relatively compact narrow-line-emitting region. Conclusions. We conclude that the variations observed in SDSS1335+0728 could be either explained by a ∼ 106M⊙ AGN that is just turning on or by an exotic tidal disruption event (TDE). If the former is true, SDSS1335+0728 is one of the strongest cases of an AGNobserved in the process of activating. If the latter were found to be the case, it would correspond to the longest and faintest TDE ever observed (or another class of still unknown nuclear transient). Future observations of SDSS1335+0728 are crucial to further understand its behaviour. Key words. galaxies: active– accretion, accretion discs– galaxies: individual: SDSS J133519.91+072807.4
JAMES WEBB STUDY THE MASSIVE BLACK HOLE SEEDSSérgio Sacani
The pathway(s) to seeding the massive black holes (MBHs) that exist at the heart of galaxies in the present and distant Universe remains an unsolved problem. Here we categorise, describe and quantitatively discuss the formation pathways of both light and heavy seeds. We emphasise that the most recent computational models suggest that rather than a bimodal-like mass spectrum between light and heavy seeds with light at one end and heavy at the other that instead a continuum exists. Light seeds being more ubiquitous and the heavier seeds becoming less and less abundant due the rarer environmental conditions required for their formation. We therefore examine the different mechanisms that give rise to different seed mass spectrums. We show how and why the mechanisms that produce the heaviest seeds are also among the rarest events in the Universe and are hence extremely unlikely to be the seeds for the vast majority of the MBH population. We quantify, within the limits of the current large uncertainties in the seeding processes, the expected number densities of the seed mass spectrum. We argue that light seeds must be at least 103 to 105 times more numerous than heavy seeds to explain the MBH population as a whole. Based on our current understanding of the seed population this makes heavy seeds (Mseed > 103 M⊙) a significantly more likely pathway given that heavy seeds have an abundance pattern than is close to and likely in excess of 10−4 compared to light seeds. Finally, we examine the current state-of-the-art in numerical calculations and recent observations and plot a path forward for near-future advances in both domains.
Immersive Learning That Works: Research Grounding and Paths ForwardLeonel Morgado
We will metaverse into the essence of immersive learning, into its three dimensions and conceptual models. This approach encompasses elements from teaching methodologies to social involvement, through organizational concerns and technologies. Challenging the perception of learning as knowledge transfer, we introduce a 'Uses, Practices & Strategies' model operationalized by the 'Immersive Learning Brain' and ‘Immersion Cube’ frameworks. This approach offers a comprehensive guide through the intricacies of immersive educational experiences and spotlighting research frontiers, along the immersion dimensions of system, narrative, and agency. Our discourse extends to stakeholders beyond the academic sphere, addressing the interests of technologists, instructional designers, and policymakers. We span various contexts, from formal education to organizational transformation to the new horizon of an AI-pervasive society. This keynote aims to unite the iLRN community in a collaborative journey towards a future where immersive learning research and practice coalesce, paving the way for innovative educational research and practice landscapes.
TOPIC OF DISCUSSION: CENTRIFUGATION SLIDESHARE.pptxshubhijain836
Centrifugation is a powerful technique used in laboratories to separate components of a heterogeneous mixture based on their density. This process utilizes centrifugal force to rapidly spin samples, causing denser particles to migrate outward more quickly than lighter ones. As a result, distinct layers form within the sample tube, allowing for easy isolation and purification of target substances.
BIRDS DIVERSITY OF SOOTEA BISWANATH ASSAM.ppt.pptxgoluk9330
Ahota Beel, nestled in Sootea Biswanath Assam , is celebrated for its extraordinary diversity of bird species. This wetland sanctuary supports a myriad of avian residents and migrants alike. Visitors can admire the elegant flights of migratory species such as the Northern Pintail and Eurasian Wigeon, alongside resident birds including the Asian Openbill and Pheasant-tailed Jacana. With its tranquil scenery and varied habitats, Ahota Beel offers a perfect haven for birdwatchers to appreciate and study the vibrant birdlife that thrives in this natural refuge.
BIRDS DIVERSITY OF SOOTEA BISWANATH ASSAM.ppt.pptx
Francisco Zafra Centro de Biologia Molecular Severo Ochoa. CSIC-UAM.
1. The glycine transporter GlyT1, NMDARs and schizophrenia
Francisco Zafra,
Centro de Biología Molecular “Severo Ochoa”, CSIC-UAM,
28049, Madrid, Spain
Simposio Internacional: Defectos del transporte de aminoácidos
Fundación Areces, Noviembre 2017
16. + antiSynaptophisin
+ protein A sepharose
AntiSynaptophysin Ab
Protein A - sepharose
GlyT1
Synaptophysin
LOCALIZATION OF GlyT1 IN SYNAPTIC VESICLES
Immunoisolation of synaptic vesicles
23. Might other transporters contribute to regulation of [Gly] in
glutamatergic synapses?
Might trafficking of GlyT1 counterbalance the effect of
treatments?
24. Might other transporters contribute to regulation of [Gly] in
glutamatergic synapses? For instance SNAT5/SN2, or Asc1
Pochini et al Front. Chem., 11 August 2014
Nakanishi et al. Am J Physiol
Cell Physiol
2001;281:C1757-C1768
39. THE UBIQUITIN LIGASE NEDD4-2 PROMOTES UBIQUITINATION AND
DOWN-REGULATION OF GLT-1 IN EUKARYOTIC CELLS
García-Tardón et al., J. Biol Chem. 2012, 287:19177-87.
40. NEDD4-2 MEDIATES THE PKC-DEPENDENT ENDOCYTOSIS OF GLT-1
García-Tardón et al., J. Biol Chem. 2012, 287:19177-87.
41. Glutamate induced internalization of GLT-1 in mixed
primary cultures from rat cortex
L-trans-2,4-PDC
WAY 213613
Ibañez et al., Neuropharmacology 2016
Adapted from Danbolt
http://www.cmbn.no/group-danbolt.html
B
180 -
100 -
200µM PDC
100µM WAY
1mM glutamate
CNX
WB:
GLT-1
CNX
GLT-1
180 -
100 -
SurfaceTotal
-
-
-
+
-
+
- +
-
+
- +
-
+
- +
-
-
200µM PDC
100µM WAY
1mM glutamate
SurfaceGLT-1(%ofcontrols)
-
-
-
+
-
+
- +
-
+
- +
-
+
- +
-
-
***
100
80
60
40
20
0
120
L-trans-2,4-PDC
WAY 213613
42. Ibañez et al., Neuropharmacology 2016
GLT-1 internalization depends on ubiquitination
Adapted from Gabriel et al., J. Neuroscience 33 (45) 17836-46, 2013
Adapted from Yernool et al., Nature 431: 811–818, 2004
0 15 30 60 (min)
250-
100-
250-
100-
1mM Glu
0 20 40 60
0
50
100
150
HAGLT-1 HAGLT-1-7KR
(mM Glu) 0 1.0 10.0 0 1.0 10.0
CNX
CNX
SurfaceGLT-1(%ofcontrols)
0 1.0 10.0 (mM Glu)
HA-GLT-1
HA-GLT-1-7KR
A B
IP:HA
WB:
UB
C
HA
HA
HA
D
Banddensity(%controls)
180 -
100 -
- + - + +
- - + + + 1µM PMA
1mM Glu
180 -
100 -
SurfaceTotal
CNX
WB:
HA
CNX
HA
CTR Glu PMA
GluPMA
Glu PMA
CTR Glu PMA GluPMA
Glu PMA
SurfaceGLT-1(%ofcontrols)
CNX
HA
180 -
100 -
Surface
- + - +
Vehicle PYR41
180 -
100 - CNX
HA
Total
Vehicle
PYR41
SurfaceGLT-1(%ofcontrols)
Glu (1mM)
120
100
80
60
40
20
0
Controls Glu (1mM)
120
100
80
60
40
20
0
*
WB:
WB:
180 -
100 -
180 -
100 -
* *
*
0
50
100
*
*
*
SurfaceTotal
Time
43. Arrestins as adaptors between GLT-1 and Nedd4-2
B
D
GFP
+ + +
- + +
100 -
75 -
180 -
100 -
75 -
180 -
GFP
- - +
Nedd4-2
Nedd4-2
IP:HALysates
180 -
100 -
50 -
Surface
- + - +
Scr
siRNA
b-ARR1
siRNA
180 -
100 -
Total
C
HA
HA
- + +HAGLT1
180 -
100 -
180 -
100 -
50 - b-ARR1
HA
Nedd4-2
HA
Nedd4-2
IP:Nedd4-2Lysates
Scr siRNA
b-ARR1 siRNA
- +
- +
-
-
180 -
100 -
50 -
180 -
100 -
50 -
IP:Nedd4-2Lysates
HA
Nedd4-2
HA
Nedd4-2
Flag
Flag
ScrsiRNA
b-ARR1siRNA
HAGLT1/Nedd4-2binding(%ofcontrols)
Scr siRNA
β-ARR1 siRNA
Glu (1 mM)Vehicle
Vehicle
Glu (1 mM)
Controls
Banddensity(%ofcontrols)
Nedd4-2
GFP-b-ARR1
HA
HA
CNX
CNX
b-ARR1
HAGLT1
GFP-b-ARR1 Glu (1 mM)
Glu (1 mM)
HAGLT1
Flag-b-ARR1
- + +
- - +
A
100
50
0
SurfaceHAGLT1(%ofcontrols)
100
50
0
0
100
200
300
400
500
WB:
WB:
WB:
WB:
*
*
*
*
Ibañez et al., Neuropharmacology 2016
44. Arrestins as adaptors between GLT-1 and Nedd4-2 mediated
ubiquitination
PKC
Glutamate
Lysosomes
45. Some pending challenges for a better understanding of
the role of glycine in the glutamatergic (and
glycerinergic) synapses
- The role of other Gly transporters located in these
synapses
- Identification of regulatory pathways and interacting
partners of GlyT1
- Response of these regulatory mechanisms to
treatments with bitopertin and other ligands of GlyT1
- Adaptive responses of D-ser or other ligands of the
glycine-B site on NMDAR.