ORAL PRESENTATION MADE BY ASARE, KUMI KWAME AT:
The Sixth Ghana Biomedical Convention Biomed – 2013 conference held at University of Cape Coast; Cape Coast, Ghana from July 29TH – 31ST 2013
Deep Sequencing Identifies Novel Circulating and Hepatic ncRNA Profiles in NA...James Nelson
Next-generation RNA sequencing has expedited the identification of new non-coding RNA species (ncRNAs), thus ushering in the emerging field of ncRNA biology. The goals of this study were to catalogue the spectrum of different ncRNAs in serum and liver of patients with NAFLD and to compare expression of serum exRNAs between NAFLD patients and healthy control subjects.
The document discusses various aspects of the HIV virus and AIDS epidemic. It provides information on the structure and lifecycle of HIV, including how it binds and fuses with target cells, undergoes reverse transcription to produce DNA, and integrates into the host cell genome. Statistics are presented on the number of people worldwide infected with HIV/AIDS in 2006 and 2005.
This document summarizes research on identifying genetic factors associated with traumatic brain injury (TBI) outcomes. It notes that the ApoE4 allele has been associated with worse outcomes, but replication has been limited. Larger collaborative studies are needed using quantitative measures as "endophenotypes" to better detect genetic effects. Lessons from Alzheimer's disease research show that genome-wide association studies with thousands of patients are needed to reliably identify genetic risk factors for complex diseases like TBI.
Lucy Lin studied the DNA damage response in pluripotent stem cells and differentiated cells from subjects with Ataxia Telangiectasia (A-T). She found that in pluripotent cells, the ATR protein mediates the DNA damage response, while in differentiated cells the ATM protein mediates the response. This represents a switch from ATR-mediated response in pluripotent cells to ATM-mediated response once the cells differentiate. Future studies aim to understand the mechanism behind this switch and examine DNA damage response with ATM and ATR inhibition in pluripotent and differentiated cells.
Time Saving Hints For natural compound librarybabies6virgo
This document summarizes research on the role of ErbB family receptor tyrosine kinases in intrahepatic cholangiocarcinoma. It discusses how aberrant expression and signaling of ErbB2 and ErbB1 have been implicated in the molecular pathogenesis of this cancer. While agents targeting these receptors showed potential, clinical trials achieved only moderate responses. The review critically analyzes preclinical and clinical studies on ErbB2 and ErbB1 overexpression, genetic alterations, and dysregulated signaling pathways. It also discusses rodent models of cholangiocarcinogenesis linked to ErbB2 overexpression and interactions between ErbB receptors and other signaling pathways involved in tumor progression.
This study examined the role of the insulin signaling pathway in regulating pancreatic beta-cell numbers in zebrafish. The researchers determined beta-cell counts in zebrafish larvae that were mutant for the insulin receptor genes insra and insrb, under normal and metabolically stressed conditions induced by nutrient deprivation or overfeeding. Preliminary results showed a significant reduction in beta-cell number in insra and insrb mutants under normal conditions. However, no increase in beta-cell count was observed in wild-type larvae under metabolic stress, requiring the data to be repeated. The goal was to establish zebrafish mutants as a model for studying insulin resistance and type 2 diabetes.
A study using a novel matrix analysis (called “PiSCES”) to observe the network activity of TCR signaling proteins in alopecia areata that revealed a subnetwork of basal T cell signaling complexes which could provide new molecular candidates for pharmacologic targeting.
This study aimed to identify the site of ubiquitination on Activation-Induced Cytidine Deaminase (AID) by the ubiquitin ligase RING Finger Protein 126 (RNF126). Using site-directed mutagenesis, the researchers found that mutating all lysine residues (K0 mutant) prevented ubiquitination, suggesting ubiquitination occurs on a lysine. Analysis of single lysine mutants revealed the K22 mutant still showed ubiquitination, indicating K22 is the main site. However, RNF126 can ubiquitinate AID at other residues as well. Together, this suggests RNF126 favors K22 as the primary ubiquitination site on AID, though it can modify AID at additional
Deep Sequencing Identifies Novel Circulating and Hepatic ncRNA Profiles in NA...James Nelson
Next-generation RNA sequencing has expedited the identification of new non-coding RNA species (ncRNAs), thus ushering in the emerging field of ncRNA biology. The goals of this study were to catalogue the spectrum of different ncRNAs in serum and liver of patients with NAFLD and to compare expression of serum exRNAs between NAFLD patients and healthy control subjects.
The document discusses various aspects of the HIV virus and AIDS epidemic. It provides information on the structure and lifecycle of HIV, including how it binds and fuses with target cells, undergoes reverse transcription to produce DNA, and integrates into the host cell genome. Statistics are presented on the number of people worldwide infected with HIV/AIDS in 2006 and 2005.
This document summarizes research on identifying genetic factors associated with traumatic brain injury (TBI) outcomes. It notes that the ApoE4 allele has been associated with worse outcomes, but replication has been limited. Larger collaborative studies are needed using quantitative measures as "endophenotypes" to better detect genetic effects. Lessons from Alzheimer's disease research show that genome-wide association studies with thousands of patients are needed to reliably identify genetic risk factors for complex diseases like TBI.
Lucy Lin studied the DNA damage response in pluripotent stem cells and differentiated cells from subjects with Ataxia Telangiectasia (A-T). She found that in pluripotent cells, the ATR protein mediates the DNA damage response, while in differentiated cells the ATM protein mediates the response. This represents a switch from ATR-mediated response in pluripotent cells to ATM-mediated response once the cells differentiate. Future studies aim to understand the mechanism behind this switch and examine DNA damage response with ATM and ATR inhibition in pluripotent and differentiated cells.
Time Saving Hints For natural compound librarybabies6virgo
This document summarizes research on the role of ErbB family receptor tyrosine kinases in intrahepatic cholangiocarcinoma. It discusses how aberrant expression and signaling of ErbB2 and ErbB1 have been implicated in the molecular pathogenesis of this cancer. While agents targeting these receptors showed potential, clinical trials achieved only moderate responses. The review critically analyzes preclinical and clinical studies on ErbB2 and ErbB1 overexpression, genetic alterations, and dysregulated signaling pathways. It also discusses rodent models of cholangiocarcinogenesis linked to ErbB2 overexpression and interactions between ErbB receptors and other signaling pathways involved in tumor progression.
This study examined the role of the insulin signaling pathway in regulating pancreatic beta-cell numbers in zebrafish. The researchers determined beta-cell counts in zebrafish larvae that were mutant for the insulin receptor genes insra and insrb, under normal and metabolically stressed conditions induced by nutrient deprivation or overfeeding. Preliminary results showed a significant reduction in beta-cell number in insra and insrb mutants under normal conditions. However, no increase in beta-cell count was observed in wild-type larvae under metabolic stress, requiring the data to be repeated. The goal was to establish zebrafish mutants as a model for studying insulin resistance and type 2 diabetes.
A study using a novel matrix analysis (called “PiSCES”) to observe the network activity of TCR signaling proteins in alopecia areata that revealed a subnetwork of basal T cell signaling complexes which could provide new molecular candidates for pharmacologic targeting.
This study aimed to identify the site of ubiquitination on Activation-Induced Cytidine Deaminase (AID) by the ubiquitin ligase RING Finger Protein 126 (RNF126). Using site-directed mutagenesis, the researchers found that mutating all lysine residues (K0 mutant) prevented ubiquitination, suggesting ubiquitination occurs on a lysine. Analysis of single lysine mutants revealed the K22 mutant still showed ubiquitination, indicating K22 is the main site. However, RNF126 can ubiquitinate AID at other residues as well. Together, this suggests RNF126 favors K22 as the primary ubiquitination site on AID, though it can modify AID at additional
ABCC10 loss enhances the effectiveness of chemotherapy drugs like docetaxel in lung cancer cells. Knocking down ABCC10 increased apoptosis and decreased tumor growth in response to docetaxel treatment. ABCC10 loss also reduced activation of signaling proteins involved in cell growth like EGFR, AKT and SRC. This suggests ABCC10 promotes chemoresistance and tumor growth by regulating these oncogenic pathways.
Targeting giants - the pharmacology of adhesions GPCRsLaura Berry
Presented at the Global Medicinal Chemistry and GPCR Summit. To find out more, visit:
www.global-engage.com
Torsten Schöneberg, from the Rudolf Schönheimer Institute of
Biochemistry and University of Leipzig, presents an overview of our current knowledge on aGPCR activation and signal transduction with a focus on the latest findings regarding the interplay between ligand binding, mechanical force, and the tethered agonistic sequence.
This document reports a case study of an HIV-positive patient with acute myeloid leukemia (AML) who received an allogeneic stem cell transplant from an HLA-matched donor who was homozygous for the CCR5 delta32 deletion. The transplant resulted in sustained remission of both AML and HIV infection without antiretroviral therapy for over 20 months, demonstrating the protective effect of the CCR5 delta32 deletion against HIV infection and the potential for stem cell transplantation as a treatment strategy for HIV/AML patients.
1) The document discusses the coevolutionary struggle between plants and pathogens, with pathogens secreting effector proteins that suppress plant immunity and plants evolving resistance genes to detect effectors.
2) Sequencing of the P. sojae genome revealed a huge superfamily of over 400 effector-like genes that show signs of accelerated divergence, likely due to coevolutionary conflict with plant hosts.
3) Analysis of P. sojae transcriptomes showed that a small number of effector genes contribute most transcripts during infection, suggesting a few key effectors have disproportionate importance for virulence.
How the Presence of DEC1, 2 and ER-α Affect the Regulation of ERE Promoter in...Patrick Dumas
The document describes an experiment examining the interaction between the DEC1, DEC2, and ER-α proteins and their effect on regulating an estrogen response element (ERE) promoter in breast cancer cells. Cells were transfected with combinations of plasmids containing the DEC1, DEC2, and ER-α genes. Luciferase assays found unexpectedly high expression of the DEC genes compared to ER-α. Results were inconsistent with previous research and errors may have occurred. Future studies aim to clarify these interactions.
The document discusses different genetic therapy techniques, including anti-sense therapy. Anti-sense therapy blocks translation by using therapeutic molecules called oligonucleotides that are about 16-20 nucleotides long. The document provides details on the structure and function of these anti-sense oligonucleotide molecules.
SSR 2014-poster-Defining roles for ESR2 isoforms in the regulation of female ...Wei Cui
The document summarizes a scientific poster presentation about defining the roles of estrogen receptor beta (ESR2) isoforms in regulating female fertility. Using zinc finger nuclease genome editing, the researchers generated two mutant rat models - one with a deletion of ESR2 exon 4 (ΔE4) and one with a deletion of exon 3 (ΔE3). Female rats with the ΔE4 mutation were infertile despite normal estrous cycles and mating behavior, as they failed to ovulate or become pregnant in response to gonadotropin treatment. In contrast, male ΔE4 rats and both male and female ΔE3 rats were fertile. The results highlight the complexity of ESR2 signaling and show the ΔE
Effects of knockout of antioxidant genes on spermatogenesisxsonixs
1) The study examined the effects of knocking out antioxidant genes Gclm and Nrf2 on sperm production and morphology in mice.
2) For Nrf2 knockout mice, results showed significantly decreased testicular and epididymal sperm counts compared to wild type mice, but no significant effects on sperm morphology.
3) For Gclm knockout mice, results found no significant effects on sperm morphology but a trend of higher percentages of immature sperm compared to wild type mice.
Kinases belong to the family of phosphotransferases and play critical roles in the process known as phosphorylation in which a phosphorylated substrate and ADP are produced.
https://www.creative-biogene.com/products/kinase-stable-cell-lines.html
History of Medical Cannabis - Dr. Jahan MarcuSafeAccess
The document summarizes research on the role of the endocannabinoid system and cannabinoid receptors CB1 and CB2 in bone formation and density. Studies show that mice lacking both CB1 and CB2 receptors have increased bone mass despite lower osteoblast proliferation. Targeting these receptors in cell studies alters signaling pathways involved in bone growth like ERK, SMAD, and AKT. This suggests cannabinoids influence bone morphogenic signaling and osteoblast function, providing a potential mechanism for the bone phenotype seen in receptor knockout mice. Future work involves using pathway inhibitors and gene expression analysis to further understand these effects.
Reverse transcriptase is an enzyme that produces DNA from RNA. It is used by retroviruses to generate a DNA copy of their RNA genome when infecting a host cell. Molecular biologists use reverse transcriptase to produce cDNA from mRNA, which can then be used to transfer genes to other organisms. Gene therapy aims to treat genetic diseases by altering the genotype, either inserting a functional gene to replace a recessive disease allele, or preventing expression of a dominant disease allele. Viral vectors, particularly retroviruses modified to not replicate, are often used to deliver the therapeutic gene to target cells. One example is treatment of Severe Combined Immunodeficiency through insertion of the ADA gene into a patient's stem cells using a retro
Draft Genome Sequence of a Klebsiella pneumoniae CarbapenemasePositiveGabrielle Dotson
This document summarizes the draft genome sequence of a pan-drug resistant Pseudomonas aeruginosa strain isolated from a patient in Colombia that harbors the blaKPC-2 gene encoding the Klebsiella pneumoniae carbapenemase enzyme on a plasmid. Sequence analysis revealed this strain belongs to the high-risk ST111 sequence type and carries the blaKPC-2 gene on a 33.5 kb plasmid, representing the first reported ST111 strain with this resistance gene on a plasmid. Characterization of this genome provides insight into the increasing threat of transferable antibiotic resistance in P. aeruginosa.
This study examined genetic variants of IL28B rs12979860 as predictors of interferon-based therapy outcomes in people with hepatitis C virus (HCV) in Pakistan. The study found that HCV subgenotype 3a was most prevalent and had higher response rates to therapy than subtype 1a. Carriage of the IL28B rs12979860 CC genotype was associated with higher sustained virological response rates to therapy. In contrast, the IL28B rs8099917 polymorphism was not associated with therapy outcomes. The study concludes that HCV genotype and IL28B rs12979860 can help predict the effectiveness of interferon-plus-ribavirin combination therapy for HCV in Pakistan.
1. The study investigated how a fluoroquinolone resistance mutation differentially impacts the fitness of Pseudomonas aeruginosa strains that express two different virulence factors, ExoU and ExoS.
2. Through competition experiments, they found the resistance mutation decreased fitness more in ExoS strains over time, but had little effect or increased fitness in ExoU strains.
3. Additionally, they discovered ExoU strains were better able to maintain wild-type supercoiling levels when exposed to levofloxacin, suggesting an ability to compensate for fitness costs through regulation of supercoiling.
This study investigated how changing the peptide sequence of gold nanoparticle vaccines (AuNVs) affects cytokine production in antigen presenting cells (APCs). AuNVs conjugated with different GP100 peptide variants or control peptides were introduced to macrophages and bone marrow derived dendritic cells (BMDCs). An ELISA assay showed AuNV-PEG-GP100 induced the highest IL-12 production in macrophages, while results in BMDCs were inconclusive. Future work is needed to better understand AuNV adjuvant properties and improve cytokine responses, potentially through new conjugation methods or in vivo studies using AuNV-PEG-GP100.
Uncovering novel candidate genes for pyridoxine-responsive epilepsy in a cons...Golden Helix Inc
This document summarizes Hilal Al Shekaili's work on characterizing the genetic cause of pyridoxine-dependent epilepsy (PDE) in an Omani family. [1] Runs of homozygosity mapping and whole-exome sequencing identified two candidate genes involved in vitamin transport and neuropeptide processing. [2] Further studies are planned to validate the candidate genes and recruit additional families. [3] Identifying new PDE genes could improve treatment and fill knowledge gaps in pyridoxine metabolism.
Integrative regulatory genomics for target gene prioritisation in SLEEnrico Ferrero
This document describes an integrative regulatory genomics approach to prioritize target genes for systemic lupus erythematosus (SLE) using multiple genomic datasets. The approach identifies genes differentially expressed in SLE patient blood and maps SLE risk variants from genome-wide association studies to these genes using expression quantitative trait loci data, enhancer-promoter correlations, and promoter capture data. Several thousand genes are found to be differentially expressed in SLE patients, and many SLE risk variants are located in non-coding regions. By integrating these various genomic datasets, dozens of candidate target genes are proposed and prioritized for further study as potential therapeutic targets for SLE.
This document contains numerous labeled figures that outline biological concepts from the smallest to largest levels of organization, including: atoms and molecules that make up DNA; cells; tissues, organs and organ systems; organisms; populations and communities; ecosystems; and domains and kingdoms of life. It also includes figures illustrating scientific concepts like natural selection and evolution, as well as the scientific method through an example of testing hypotheses.
This document discusses the use of antimalarial drugs in India. It provides background on malaria in India, describing the species that cause malaria, geographic distribution, and national treatment guidelines. It then reviews several previous studies that evaluated antimalarial drug use and prescribing patterns in hospitals in India and Nepal. The studies found inconsistent adherence to treatment guidelines, overuse of artemisinin monotherapy, and prescription of antimalarials for non-malarial conditions. The document aims to add to this research by evaluating antimalarial drug use in a tertiary hospital in Bagalkot, India.
The document summarizes the evolution of malarial drugs from the first drug quinine derived from tree bark in the 1800s to current efforts to develop new drugs. It describes the malaria parasite life cycle and challenges in treating different species and stages. A variety of drug classes have been developed that target various stages, from blood stages to dormant liver stages. However, resistance develops rapidly when drugs are used as monotherapy. Current efforts focus on new drug discovery, revisiting old drugs, and exploring drugs from other fields. Combination therapies and targeting transmission stages may help eliminate malaria.
Antimalarial drug efficacy and drug resistance(yemen)Ghamdan Al Tahish
This document discusses antimalarial drug efficacy and drug resistance. It provides information on:
1) How drug resistance emerges from genetic mutations in parasites and is selected for by sub-therapeutic drug levels, allowing resistant parasites to multiply.
2) Factors that influence the development of resistance like drug levels parasites are exposed to, immunity, and how/how well drugs are used.
3) Methods for monitoring resistance including therapeutic efficacy studies, in vitro assays, and molecular markers. Monitoring is important for informing treatment policy.
4) Criteria for changing treatment policy if over 10% of cases show treatment failure in efficacy studies. Combination therapies are recommended to slow resistance.
ABCC10 loss enhances the effectiveness of chemotherapy drugs like docetaxel in lung cancer cells. Knocking down ABCC10 increased apoptosis and decreased tumor growth in response to docetaxel treatment. ABCC10 loss also reduced activation of signaling proteins involved in cell growth like EGFR, AKT and SRC. This suggests ABCC10 promotes chemoresistance and tumor growth by regulating these oncogenic pathways.
Targeting giants - the pharmacology of adhesions GPCRsLaura Berry
Presented at the Global Medicinal Chemistry and GPCR Summit. To find out more, visit:
www.global-engage.com
Torsten Schöneberg, from the Rudolf Schönheimer Institute of
Biochemistry and University of Leipzig, presents an overview of our current knowledge on aGPCR activation and signal transduction with a focus on the latest findings regarding the interplay between ligand binding, mechanical force, and the tethered agonistic sequence.
This document reports a case study of an HIV-positive patient with acute myeloid leukemia (AML) who received an allogeneic stem cell transplant from an HLA-matched donor who was homozygous for the CCR5 delta32 deletion. The transplant resulted in sustained remission of both AML and HIV infection without antiretroviral therapy for over 20 months, demonstrating the protective effect of the CCR5 delta32 deletion against HIV infection and the potential for stem cell transplantation as a treatment strategy for HIV/AML patients.
1) The document discusses the coevolutionary struggle between plants and pathogens, with pathogens secreting effector proteins that suppress plant immunity and plants evolving resistance genes to detect effectors.
2) Sequencing of the P. sojae genome revealed a huge superfamily of over 400 effector-like genes that show signs of accelerated divergence, likely due to coevolutionary conflict with plant hosts.
3) Analysis of P. sojae transcriptomes showed that a small number of effector genes contribute most transcripts during infection, suggesting a few key effectors have disproportionate importance for virulence.
How the Presence of DEC1, 2 and ER-α Affect the Regulation of ERE Promoter in...Patrick Dumas
The document describes an experiment examining the interaction between the DEC1, DEC2, and ER-α proteins and their effect on regulating an estrogen response element (ERE) promoter in breast cancer cells. Cells were transfected with combinations of plasmids containing the DEC1, DEC2, and ER-α genes. Luciferase assays found unexpectedly high expression of the DEC genes compared to ER-α. Results were inconsistent with previous research and errors may have occurred. Future studies aim to clarify these interactions.
The document discusses different genetic therapy techniques, including anti-sense therapy. Anti-sense therapy blocks translation by using therapeutic molecules called oligonucleotides that are about 16-20 nucleotides long. The document provides details on the structure and function of these anti-sense oligonucleotide molecules.
SSR 2014-poster-Defining roles for ESR2 isoforms in the regulation of female ...Wei Cui
The document summarizes a scientific poster presentation about defining the roles of estrogen receptor beta (ESR2) isoforms in regulating female fertility. Using zinc finger nuclease genome editing, the researchers generated two mutant rat models - one with a deletion of ESR2 exon 4 (ΔE4) and one with a deletion of exon 3 (ΔE3). Female rats with the ΔE4 mutation were infertile despite normal estrous cycles and mating behavior, as they failed to ovulate or become pregnant in response to gonadotropin treatment. In contrast, male ΔE4 rats and both male and female ΔE3 rats were fertile. The results highlight the complexity of ESR2 signaling and show the ΔE
Effects of knockout of antioxidant genes on spermatogenesisxsonixs
1) The study examined the effects of knocking out antioxidant genes Gclm and Nrf2 on sperm production and morphology in mice.
2) For Nrf2 knockout mice, results showed significantly decreased testicular and epididymal sperm counts compared to wild type mice, but no significant effects on sperm morphology.
3) For Gclm knockout mice, results found no significant effects on sperm morphology but a trend of higher percentages of immature sperm compared to wild type mice.
Kinases belong to the family of phosphotransferases and play critical roles in the process known as phosphorylation in which a phosphorylated substrate and ADP are produced.
https://www.creative-biogene.com/products/kinase-stable-cell-lines.html
History of Medical Cannabis - Dr. Jahan MarcuSafeAccess
The document summarizes research on the role of the endocannabinoid system and cannabinoid receptors CB1 and CB2 in bone formation and density. Studies show that mice lacking both CB1 and CB2 receptors have increased bone mass despite lower osteoblast proliferation. Targeting these receptors in cell studies alters signaling pathways involved in bone growth like ERK, SMAD, and AKT. This suggests cannabinoids influence bone morphogenic signaling and osteoblast function, providing a potential mechanism for the bone phenotype seen in receptor knockout mice. Future work involves using pathway inhibitors and gene expression analysis to further understand these effects.
Reverse transcriptase is an enzyme that produces DNA from RNA. It is used by retroviruses to generate a DNA copy of their RNA genome when infecting a host cell. Molecular biologists use reverse transcriptase to produce cDNA from mRNA, which can then be used to transfer genes to other organisms. Gene therapy aims to treat genetic diseases by altering the genotype, either inserting a functional gene to replace a recessive disease allele, or preventing expression of a dominant disease allele. Viral vectors, particularly retroviruses modified to not replicate, are often used to deliver the therapeutic gene to target cells. One example is treatment of Severe Combined Immunodeficiency through insertion of the ADA gene into a patient's stem cells using a retro
Draft Genome Sequence of a Klebsiella pneumoniae CarbapenemasePositiveGabrielle Dotson
This document summarizes the draft genome sequence of a pan-drug resistant Pseudomonas aeruginosa strain isolated from a patient in Colombia that harbors the blaKPC-2 gene encoding the Klebsiella pneumoniae carbapenemase enzyme on a plasmid. Sequence analysis revealed this strain belongs to the high-risk ST111 sequence type and carries the blaKPC-2 gene on a 33.5 kb plasmid, representing the first reported ST111 strain with this resistance gene on a plasmid. Characterization of this genome provides insight into the increasing threat of transferable antibiotic resistance in P. aeruginosa.
This study examined genetic variants of IL28B rs12979860 as predictors of interferon-based therapy outcomes in people with hepatitis C virus (HCV) in Pakistan. The study found that HCV subgenotype 3a was most prevalent and had higher response rates to therapy than subtype 1a. Carriage of the IL28B rs12979860 CC genotype was associated with higher sustained virological response rates to therapy. In contrast, the IL28B rs8099917 polymorphism was not associated with therapy outcomes. The study concludes that HCV genotype and IL28B rs12979860 can help predict the effectiveness of interferon-plus-ribavirin combination therapy for HCV in Pakistan.
1. The study investigated how a fluoroquinolone resistance mutation differentially impacts the fitness of Pseudomonas aeruginosa strains that express two different virulence factors, ExoU and ExoS.
2. Through competition experiments, they found the resistance mutation decreased fitness more in ExoS strains over time, but had little effect or increased fitness in ExoU strains.
3. Additionally, they discovered ExoU strains were better able to maintain wild-type supercoiling levels when exposed to levofloxacin, suggesting an ability to compensate for fitness costs through regulation of supercoiling.
This study investigated how changing the peptide sequence of gold nanoparticle vaccines (AuNVs) affects cytokine production in antigen presenting cells (APCs). AuNVs conjugated with different GP100 peptide variants or control peptides were introduced to macrophages and bone marrow derived dendritic cells (BMDCs). An ELISA assay showed AuNV-PEG-GP100 induced the highest IL-12 production in macrophages, while results in BMDCs were inconclusive. Future work is needed to better understand AuNV adjuvant properties and improve cytokine responses, potentially through new conjugation methods or in vivo studies using AuNV-PEG-GP100.
Uncovering novel candidate genes for pyridoxine-responsive epilepsy in a cons...Golden Helix Inc
This document summarizes Hilal Al Shekaili's work on characterizing the genetic cause of pyridoxine-dependent epilepsy (PDE) in an Omani family. [1] Runs of homozygosity mapping and whole-exome sequencing identified two candidate genes involved in vitamin transport and neuropeptide processing. [2] Further studies are planned to validate the candidate genes and recruit additional families. [3] Identifying new PDE genes could improve treatment and fill knowledge gaps in pyridoxine metabolism.
Integrative regulatory genomics for target gene prioritisation in SLEEnrico Ferrero
This document describes an integrative regulatory genomics approach to prioritize target genes for systemic lupus erythematosus (SLE) using multiple genomic datasets. The approach identifies genes differentially expressed in SLE patient blood and maps SLE risk variants from genome-wide association studies to these genes using expression quantitative trait loci data, enhancer-promoter correlations, and promoter capture data. Several thousand genes are found to be differentially expressed in SLE patients, and many SLE risk variants are located in non-coding regions. By integrating these various genomic datasets, dozens of candidate target genes are proposed and prioritized for further study as potential therapeutic targets for SLE.
This document contains numerous labeled figures that outline biological concepts from the smallest to largest levels of organization, including: atoms and molecules that make up DNA; cells; tissues, organs and organ systems; organisms; populations and communities; ecosystems; and domains and kingdoms of life. It also includes figures illustrating scientific concepts like natural selection and evolution, as well as the scientific method through an example of testing hypotheses.
This document discusses the use of antimalarial drugs in India. It provides background on malaria in India, describing the species that cause malaria, geographic distribution, and national treatment guidelines. It then reviews several previous studies that evaluated antimalarial drug use and prescribing patterns in hospitals in India and Nepal. The studies found inconsistent adherence to treatment guidelines, overuse of artemisinin monotherapy, and prescription of antimalarials for non-malarial conditions. The document aims to add to this research by evaluating antimalarial drug use in a tertiary hospital in Bagalkot, India.
The document summarizes the evolution of malarial drugs from the first drug quinine derived from tree bark in the 1800s to current efforts to develop new drugs. It describes the malaria parasite life cycle and challenges in treating different species and stages. A variety of drug classes have been developed that target various stages, from blood stages to dormant liver stages. However, resistance develops rapidly when drugs are used as monotherapy. Current efforts focus on new drug discovery, revisiting old drugs, and exploring drugs from other fields. Combination therapies and targeting transmission stages may help eliminate malaria.
Antimalarial drug efficacy and drug resistance(yemen)Ghamdan Al Tahish
This document discusses antimalarial drug efficacy and drug resistance. It provides information on:
1) How drug resistance emerges from genetic mutations in parasites and is selected for by sub-therapeutic drug levels, allowing resistant parasites to multiply.
2) Factors that influence the development of resistance like drug levels parasites are exposed to, immunity, and how/how well drugs are used.
3) Methods for monitoring resistance including therapeutic efficacy studies, in vitro assays, and molecular markers. Monitoring is important for informing treatment policy.
4) Criteria for changing treatment policy if over 10% of cases show treatment failure in efficacy studies. Combination therapies are recommended to slow resistance.
This document discusses chloroquine resistant malaria and recent advances in its treatment. It begins with an overview of the global and Indian scenarios of chloroquine resistant Plasmodium falciparum malaria. It then discusses the definition, mechanisms, diagnosis and treatment guidelines for chloroquine resistant malaria. For treatment, it recommends various artemisinin combination therapies as first-line treatment. It also provides details on the pharmacotherapy of severe, chloroquine resistant P. vivax malaria, and malaria in pregnancy. Throughout it discusses newer drug combinations, targets and advances in the treatment and prevention of chloroquine resistant malaria.
molecular markers for antimalarial drug resistanceAnil kumar
this presentation deals with the drugs for choice for malaria, their mode of action, resistance development and its distribution, how to evaluate resistance development and reasons for developing resistance.
The document discusses various antimalarial drugs, classifying them as tissue schizontocides or blood schizontocides. It summarizes the mechanisms of action, pharmacokinetics, uses, and side effects of several common antimalarial medications including chloroquine, primaquine, mefloquine, quinine, pyrimethamine, tetracyclines, and artemisinin derivatives. It also describes various artemisinin-based combination therapies that are now widely used as first-line treatments for Plasmodium falciparum malaria.
This study examined 51 Brazilian Plasmodium falciparum isolates for polymorphisms in the Pfmdr1 gene thought to be associated with chloroquine resistance. 49 of the isolates were found to be resistant to chloroquine in vitro, while all were sensitive to mefloquine, amodiaquine, and quinine. The isolates were analyzed for three Pfmdr1 polymorphisms: Asn86Tyr, Asn1042Asp, and Asp1246Tyr. Asn86Tyr was not detected in any isolates, while Asn1042Asp was found in 50 isolates and Asp1246Tyr was found in all 51 isolates. This provides support that As
This document summarizes the medical history and treatment of a 19-year-old female patient living with HIV. She was started on multiple ART regimens as a child, including Stocrin, Varidex, and Zerit, and later Triomune 30, which failed. She developed side effects including pancreatitis after being switched to a second line regimen including Kaletra. Multiple switches were required due to toxicity and resistance issues. Over time her health stabilized on a regimen including TDF, AZT, and Aluvia, though adherence was poor. Managing pediatric HIV treatment long-term in resource-limited settings presents many challenges.
This study investigated the effects of Cocaine-and-Amphetamine Regulated Transcript (CART) peptide on dopamine (DA)- and cocaine-mediated locomotor activity in male and female rats. The researchers found that administering CART peptide into the nucleus accumbens blunted or reduced both DA- and cocaine-induced locomotor activity in both male and female rats. This suggests that CART peptide effectively modulates DA- and cocaine-mediated effects in a similar manner in both sexes, without any significant sex differences. The study concludes that CART peptide is an important homeostatic regulator of mesolimbic DA function in the nucleus accumbens for both males and females.
DOI: 10.21276/ijlssr.2016.2.3.5
ABSTRACT- Purpose: Multidrug resistant organisms are on rise. Various enzymes present in the organisms are
responsible for this resistance. Detection of these enzymes become challenging if organisms harbor multiple enzymes.
This study was done to find the prevalence of various enzymes at our tertiary care hospital.
Materials and methods: Extended spectrum beta lactamases (ESBL) detection was done by screening method followed
by two phenotypic confirmatory methods (double disc synergy and disc potentiation method). Carbapenems (imipenem,
meropenem) resistant strain were analyzed for metallo beta lactamases (MBL) and carbapenemases (KPC) using
combined disc test and modified Hodge test. Amp C detection was done by using cefoxitin disc on heavy lawn of E. coli
ATCC 25922. Distortion of the zone size on the streaked line of test was taken as positive for Amp C.
Results: 87.15% were screened positive for ESBL and confirmed cases were 36.80%. Carbapenem resistant was 31.86%,
MBL was 7.52%, KPC was 0.82 %, Amp C in 0.23%.
Conclusions: There is high prevalence of ESBL. Detection of these enzymes is important in routine diagnostics for
treatment. Co-expression of multiple enzymes was detected in this study. Judicious and rational use of antibiotics is
required which might lead to decrease in emergence of resistance. Also knowledge of the prevalence of these enzymes
helps in empirical antibiotic therapy and in infection control purpose.
Key-words- Multidrug resistant, ESBL, MBL, KPC, Amp C
This document summarizes clinical trial results of the oral ALK inhibitor crizotinib (PF-02341066) in patients with ALK-positive non-small cell lung cancer. The trial showed that crizotinib had significant clinical activity in ALK-positive NSCLC patients, with an objective response rate of 57% and disease control rate of 87%. The median progression-free survival was 10 months for these patients. In contrast, patients with ALK-negative NSCLC did not respond to crizotinib. These results provide evidence that crizotinib is an effective targeted therapy for patients with ALK-positive NSCLC.
Post therapeutic i-131 whole body scan infatmahoceny
This document discusses post-therapeutic I-131 whole body scans (RxWBS) in patients with differentiated thyroid cancer. It covers the rationale for performing RxWBS after radioiodine therapy, including that RxWBS can detect additional lesions not seen on diagnostic scans. The optimal timing for RxWBS is debated but it is generally performed 2-10 days after therapy. RxWBS protocols, findings, and potential false positives are reviewed. RxWBS provides important information to guide treatment but the interpretation requires consideration of physiological and non-specific tracer uptake.
Similar to Evidence of continuous use of chloroquine (cq (7)
Adhd Medication Shortage Uk - trinexpharmacy.comreignlana06
The UK is currently facing a Adhd Medication Shortage Uk, which has left many patients and their families grappling with uncertainty and frustration. ADHD, or Attention Deficit Hyperactivity Disorder, is a chronic condition that requires consistent medication to manage effectively. This shortage has highlighted the critical role these medications play in the daily lives of those affected by ADHD. Contact : +1 (747) 209 – 3649 E-mail : sales@trinexpharmacy.com
Local Advanced Lung Cancer: Artificial Intelligence, Synergetics, Complex Sys...Oleg Kshivets
Overall life span (LS) was 1671.7±1721.6 days and cumulative 5YS reached 62.4%, 10 years – 50.4%, 20 years – 44.6%. 94 LCP lived more than 5 years without cancer (LS=2958.6±1723.6 days), 22 – more than 10 years (LS=5571±1841.8 days). 67 LCP died because of LC (LS=471.9±344 days). AT significantly improved 5YS (68% vs. 53.7%) (P=0.028 by log-rank test). Cox modeling displayed that 5YS of LCP significantly depended on: N0-N12, T3-4, blood cell circuit, cell ratio factors (ratio between cancer cells-CC and blood cells subpopulations), LC cell dynamics, recalcification time, heparin tolerance, prothrombin index, protein, AT, procedure type (P=0.000-0.031). Neural networks, genetic algorithm selection and bootstrap simulation revealed relationships between 5YS and N0-12 (rank=1), thrombocytes/CC (rank=2), segmented neutrophils/CC (3), eosinophils/CC (4), erythrocytes/CC (5), healthy cells/CC (6), lymphocytes/CC (7), stick neutrophils/CC (8), leucocytes/CC (9), monocytes/CC (10). Correct prediction of 5YS was 100% by neural networks computing (error=0.000; area under ROC curve=1.0).
share - Lions, tigers, AI and health misinformation, oh my!.pptxTina Purnat
• Pitfalls and pivots needed to use AI effectively in public health
• Evidence-based strategies to address health misinformation effectively
• Building trust with communities online and offline
• Equipping health professionals to address questions, concerns and health misinformation
• Assessing risk and mitigating harm from adverse health narratives in communities, health workforce and health system
Title: Sense of Smell
Presenter: Dr. Faiza, Assistant Professor of Physiology
Qualifications:
MBBS (Best Graduate, AIMC Lahore)
FCPS Physiology
ICMT, CHPE, DHPE (STMU)
MPH (GC University, Faisalabad)
MBA (Virtual University of Pakistan)
Learning Objectives:
Describe the primary categories of smells and the concept of odor blindness.
Explain the structure and location of the olfactory membrane and mucosa, including the types and roles of cells involved in olfaction.
Describe the pathway and mechanisms of olfactory signal transmission from the olfactory receptors to the brain.
Illustrate the biochemical cascade triggered by odorant binding to olfactory receptors, including the role of G-proteins and second messengers in generating an action potential.
Identify different types of olfactory disorders such as anosmia, hyposmia, hyperosmia, and dysosmia, including their potential causes.
Key Topics:
Olfactory Genes:
3% of the human genome accounts for olfactory genes.
400 genes for odorant receptors.
Olfactory Membrane:
Located in the superior part of the nasal cavity.
Medially: Folds downward along the superior septum.
Laterally: Folds over the superior turbinate and upper surface of the middle turbinate.
Total surface area: 5-10 square centimeters.
Olfactory Mucosa:
Olfactory Cells: Bipolar nerve cells derived from the CNS (100 million), with 4-25 olfactory cilia per cell.
Sustentacular Cells: Produce mucus and maintain ionic and molecular environment.
Basal Cells: Replace worn-out olfactory cells with an average lifespan of 1-2 months.
Bowman’s Gland: Secretes mucus.
Stimulation of Olfactory Cells:
Odorant dissolves in mucus and attaches to receptors on olfactory cilia.
Involves a cascade effect through G-proteins and second messengers, leading to depolarization and action potential generation in the olfactory nerve.
Quality of a Good Odorant:
Small (3-20 Carbon atoms), volatile, water-soluble, and lipid-soluble.
Facilitated by odorant-binding proteins in mucus.
Membrane Potential and Action Potential:
Resting membrane potential: -55mV.
Action potential frequency in the olfactory nerve increases with odorant strength.
Adaptation Towards the Sense of Smell:
Rapid adaptation within the first second, with further slow adaptation.
Psychological adaptation greater than receptor adaptation, involving feedback inhibition from the central nervous system.
Primary Sensations of Smell:
Camphoraceous, Musky, Floral, Pepperminty, Ethereal, Pungent, Putrid.
Odor Detection Threshold:
Examples: Hydrogen sulfide (0.0005 ppm), Methyl-mercaptan (0.002 ppm).
Some toxic substances are odorless at lethal concentrations.
Characteristics of Smell:
Odor blindness for single substances due to lack of appropriate receptor protein.
Behavioral and emotional influences of smell.
Transmission of Olfactory Signals:
From olfactory cells to glomeruli in the olfactory bulb, involving lateral inhibition.
Primitive, less old, and new olfactory systems with different path
TEST BANK For Community Health Nursing A Canadian Perspective, 5th Edition by...Donc Test
TEST BANK For Community Health Nursing A Canadian Perspective, 5th Edition by Stamler, Verified Chapters 1 - 33, Complete Newest Version Community Health Nursing A Canadian Perspective, 5th Edition by Stamler, Verified Chapters 1 - 33, Complete Newest Version Community Health Nursing A Canadian Perspective, 5th Edition by Stamler Community Health Nursing A Canadian Perspective, 5th Edition TEST BANK by Stamler Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Pdf Chapters Download Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Pdf Download Stuvia Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Study Guide Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Ebook Download Stuvia Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Questions and Answers Quizlet Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Studocu Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Quizlet Test Bank For Community Health Nursing A Canadian Perspective, 5th Edition Stuvia Community Health Nursing A Canadian Perspective, 5th Edition Pdf Chapters Download Community Health Nursing A Canadian Perspective, 5th Edition Pdf Download Course Hero Community Health Nursing A Canadian Perspective, 5th Edition Answers Quizlet Community Health Nursing A Canadian Perspective, 5th Edition Ebook Download Course hero Community Health Nursing A Canadian Perspective, 5th Edition Questions and Answers Community Health Nursing A Canadian Perspective, 5th Edition Studocu Community Health Nursing A Canadian Perspective, 5th Edition Quizlet Community Health Nursing A Canadian Perspective, 5th Edition Stuvia Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Pdf Chapters Download Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Pdf Download Stuvia Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Study Guide Questions and Answers Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Ebook Download Stuvia Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Questions Quizlet Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Studocu Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Quizlet Community Health Nursing A Canadian Perspective, 5th Edition Test Bank Stuvia
Basavarajeeyam is an important text for ayurvedic physician belonging to andhra pradehs. It is a popular compendium in various parts of our country as well as in andhra pradesh. The content of the text was presented in sanskrit and telugu language (Bilingual). One of the most famous book in ayurvedic pharmaceutics and therapeutics. This book contains 25 chapters called as prakaranas. Many rasaoushadis were explained, pioneer of dhatu druti, nadi pareeksha, mutra pareeksha etc. Belongs to the period of 15-16 century. New diseases like upadamsha, phiranga rogas are explained.
NVBDCP.pptx Nation vector borne disease control programSapna Thakur
NVBDCP was launched in 2003-2004 . Vector-Borne Disease: Disease that results from an infection transmitted to humans and other animals by blood-feeding arthropods, such as mosquitoes, ticks, and fleas. Examples of vector-borne diseases include Dengue fever, West Nile Virus, Lyme disease, and malaria.
NVBDCP.pptx Nation vector borne disease control program
Evidence of continuous use of chloroquine (cq
1. Evidence of continuous use of Chloroquine
(CQ) in Ghana after seven years of its ban, its
consequences on CQ resistant markers
ASARE, KUMI KWAME
Department of Biomedical and Forensic sciences,
University of Cape Coast
“you read about it in the news but you don't believe it you'll only know
about it when the man in the long black coat knocks on your door 'cause
you're his next victim”…Lucky Dube
3. CQ resistance
Late 1950s and early 1960s
In 1965 CQ resistance had been alleged by
Schwendler (Beausoleil, 1967).
CQ resistant P. falciparum were isolated in
1986 (Neequaye, 1986)
K. K. Asare, et al., 3
4. In 2001, CQ resistance P. falciparum in Ghana was
reported to be around 88% (Evans et al., 2005)
In 2005,MoH finally implemented ACTs
Despite the replacement anecdotal evidence
suggests that CQ is still in used in many communities
in the country.
K. K. Asare, et al., 4
5. The continuous use of the former drug would result
in development of stable mutations in:
I. Pfcrt gene
II. Pfmdr-1 gene
Which can lead to cross-resistance to other
antimalarial drugs such as:
1. Amodiaquine
2. Artemisinin
3. Quinine
K. K. Asare, et al., 5
7. Methodology
Solomon-Saker method
I.0.05%TBPEE-in-chloroform
Molecular method
I.Chelex dna extraction
II.Nested PCR methods
III.RFLP
Statistical analysis: SPSS-
Chi-square at 95% CI
K. K. Asare, et al.,
STUDY SITES
SUBJECT SELECTION
MALARIA INFECTED
PATIENTS
NON-MALARIA
INFECTED PATIENTS
SUBJECTS WHO
WERE NOT
ENROLLED
ENROLLED SUBJECTS
SAMPLE TAKEN
BLOOD SAMPLE URINE SAMPLE
MYSTERY BUYING
METHOD
SALES OF CQ
BY COMMUNITY
PHARMACY &
CHEMICAL SHOPS
1. HAEMATOLOGICAL ANALYSIS
2. MOLECULAR ANALYSIS
1. URINALYSIS
2. URINE CQ ANALYSIS
1. ELMINA HEALTH CENTRE
2. CAPE COAST DISTRICT HOSPITAL
3. TWIFO PRASO DISTRICT HOSPITAL
4. ST. FRANCIS XAVIER HOSPITAL, ASSIN
FOSO
ETHICAL CLEARANCE:
1. GHSERC
2. UCCIRB
QUESTIONNAIRE
ADMINISTRATION
1
2
7
9. K. K. Asare, et al.,
Fig.1: Samples of chloroquine injections
1. They were mainly manufactured at India & China
2. About 20% of CQ injections obtained did not have labels
FIG. 1
9
10. K. K. Asare, et al.,
Fig.2: controls samples fortified with CQ and patients samples that contained CQ
Cross-reactivity test were performed
Contrary to Malawi
Asia & South-America case, Ghana has maintained high CQR due to continuous
CQ usage
FIG 2
10
11. K. K. Asare, et al.,
Fig. 3: Apo 1 RFLP at K76T in pfcrt
Persistent CQ use subject the parasite to drug pressure
Development of stable T-76 mutation & other set of mutations in pfcrt
gene
200
100
234
FIG. 3 FIG. 4
11
12. K. K. Asare, et al.,
Fig. 5: Dpn II RFLP at D1246Y in pfmdr-1
Mutations in pfmdr-1 is synergetic to pfcrt in CQR mechanisms
Combination of haplotype mutations in pfmdr-1 modulates CQR
800
400
100
FIG. 5 FIG.6
12
13. • 86 Y & 184 F
mutations play a role
in CQR
• Studies from South-
America, Asia &
Africa have shown
that 86 Y & 184 F
confer resistance to
QN, MFQ &
Halofantrine
• Also modulate
parasite sensitivity to
artemisinin drug
K. K. Asare, et al., 13
14. Initial studies
reported
association
between 86 Y in
pfmdr-1 & CQR
However, several
field studies
showed
inconsistency
Again,
transfection
studies showed
that replacement
of 86 Y with 86 N
in pfmdr-1
decrease CQR
from high to
moderate levels K. K. Asare, et al., 14
15. CONCLUSION & RECOMMENDATION
The study has revealed continuous use of CQ in the country
Increase of point mutations in pfmdr-1 gene
These mutations can cause cross-resistance to current anti-
malarial drugs
We recommend:
a. Stringent regulations
b. Further studies:
1. To investigate CQ importation
2. Drug sensitivity and pharmacokinetics studies to validate our
findings
K. K. Asare, et al., 15
16. K. K. Asare, et al., 16
Acknowledgements
DR. JOHNSON N. BOAMPONG
DR. NEILS B. QUASHIE
SUPERVISORS
SCHOOL OF BIOLOGICAL SCIENCES
Department of Biomedical and Forensic sciences