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Prevalence of Vancomycin-Resistant Enterococci (VRE) in
     the hospitalized patients of Islamabad and Rawappindi




                                        OBAID ULLAH
                               Quaid-i-Azam University, Islamabad




Member , American Society for Microbiology (ASM), USA.
                                                                          1
Associate Member, International Federation of Infection Control (IFIC).
Introduction - Nosocomial Infections
   Nosocomial infections pose a continuing challenge
   Defined as an infection which develops 48 hours after
    hospital admission or within 48 hours
   1.7 million infections and 99,000 deaths annually
   Organisms of current concern
      Methicillin-resistant Staphylococcus aureus,

      Glycopeptide-intermediate and resistant S aureus,

      Vancomycin-resistant enterococci, and

      Multidrugresistant Gram-negative bacteria




                                                            2
Introduction - Enterococci

   The 3rd cause of nosocomial infections.
   Involved in over 800,000 infections per year in the USA in
    2004
   Gram(+) , Cocci.
   Survive in 6.5% NaCl and at a pH of 9.6
   Most capable of growing from 10 º to 45 º C range;
   Survive at 60º C for 30 minutes
   There are 23 species of Enterococci.
   Two that account for the majority of human infections are:
    Enterococcus faecalis and Enterococcus faecium.
   Part of the normal bowel flora.

                                                           3
Resistance potential of Enterococci
       Innately resistant to most antibiotics including:
         Cephalosporins, Penicillins, Clindamycin and Trimethoprim

       Can also acquire, accumulate and transfer genetic elements e.g.
        (plasmids, and transposons) using conjugation
       Acquire Resistance
         Macrolides
         Tetracycline
         Lincosamides
         Chloramphenicol
         Aminoglycosides
         Penicillin (without beta-lactamase)
         Penicillin (with beta-lactamase)
         Vancomycin
         Quinolones

                                                                      4
Enterococcal Infections and Risk Factors
   Wide range of infections
      Endocarditis, Septicemia, Urinary Tract Infections,

       Intra-abdominal and Wound Infections as well as
       infections of Indwelling Lines.
   Having an underlying comorbid condition
   Prolonged length of hospital stay
   And close proximity to another VRE-colonized or
    -infected patient
   Vancomycin has been used as the last resort to treat
    enterococcal infections



                                                             5
Vancomycin Action and Resistance by Enterococci
   Binding to the terminal D-alanyl-D-alanine residues

    →   prevents crosslinking of the peptidoglycan

        component in the cell wall of G(+) organisms

   Inhibits bacterial growth, eventually leading to death.


               D-alanyl-D-alanine residue
                            ↓
               D-alanyl-D-lactate moiety

   Vancomycin cannot bind to this peptide
                                                              6
Epidemiology in VRE
        First described in Europe in 1989.
        Primarily a nosocomial pathogen
        Alarming increase
        In the United States, prevalence as high as 47%
        First case of VRE in Pakistan was reported in 2002
         from Karachi
        First case of VRE in Rawalpindi / Islamabad in 2003
         by AFIP


Uttley, A.H., George, R.C., Naidoo, J., Woodford, N., Johnson, A.P., Collins, C.H., Morrison, D., Gilfillan, A.J., Fitch, L.E.
and Heptonstall, J. 1989. High-level vancomycin-resistant enterococci causing hospital infections. Epidemiol Infect
103:173−181.
Khan, E., Sarwari A., Hassan, R., Ghori, S., Babar, I., O’Brien, F. and Grubb, W. 2002. Emergence of vancomycin resistant
Enterococcus faecium at a tertiary care hospital in Karachi, Pakistan. J Hosp Infect; 52: 292-6.                        7
Treatment of VRE
   Quinupristin-Dalfopristin (1999)
      First antimicrobial agent available for the treatment

      Inhibiting protein synthesis

   Linezolid (2000)
      Inhibits ribosomal protein synthesis

   Daptomycin (2003)
      Lipopeptide fermentation product of Streptomyces

       roseosporus
      Disrupts multiple aspects of bacterial membrane

   Tigecycline (2005 )
      A broad-spectrum glycylcycline antimicrobial agent

   Mannopeptimycins and Dalbavancin (Future treatments)
      Semisynthetic glycopeptides


                                                               8
Aim and Objectives of Current Study
   To isolate and identify enterococci from different clinical specimens
    of three tertiary care hospitals of Rawalpindi and Islamabad.
   Detection of Vancomycin resistant enterococci from the isolated
    strains.
   Determination of frequency of VRE in Pakistan Institute of Medical
    Sciences, Shifa Internaional Hospital and Holy Family Hospital.
   Checking the antibiotic susceptibility of different antibiotics against
    Vancomycin resistant enterococci (VRE).
   To check the MIC (Minimum Inhibitory Concentration) of different
    antibiotics.

                                                                        9
Experimental Work




                    10
   MATERIAL

       Blood agar (Oxoid),
       Chromocult Enterococci Agar (Merck),
       ChromID® VRE (Biomerieux),
       Mueller Hinton agar (Oxoid),
       Antibiotic discs (Oxoid),
       Antibiotic powders (MP biomedics).




                                               11
Sampling

    Three different hospitals of Islamabad and Rawalpindi
       Pakistan Institute of Medical Sciences (P.I.M.S),
        Islamabad.
       Shifa International Hospital, Islamabad.
       Holy Family Hospital, Rawalpindi.
    Specimens
      Urine, Blood, Pus, Tissues, Surgical sites etc.
    A total of 133 samples were collected in a period of 6 months
     (April, 2009- September, 2009).




                                                                     12
Isolation of Enterococci

    Culturing on the Chromocult® Enterococci Agar
     (Merck).
    Evaluation
          Red colonies with a diameter of 0.5 to 2 mm =
     Enterococci




                                                          13
Identification of Enterococcus Species

   By the Biochemical tests
   Three tests were performed to identify the species
      Arabinose fermentation, Sorbitol fermentation and

      Growth at 4°C




                                                           14
Isolation of Vancomycin Resistant Enterococci


    Enterococcus species were then sreaked on to the
     chromID™ VRE (Biomerieux) media
    Contains two chromogenic substrates
        alpha-Glucosidase & beta-Galactosidase
    After 24hrs of incubation
        Bluish-green colour = Vancomycin resistant E. faecalis
        Violet colour = Vancomycin resistant E. faecium




                                                                  15
Antibiotic Susceptibility Testing

   13 antibiotic discs were tested against VRE isolates
   Performed on Mueller Hinton agar by Kirby-Bauer disc diffusion
    method




                                                              16
Antibiotics used for disk diffusion test
Antibiotic               Abbreviation Potency   Manufacturer   Antibiotic class


                                                Oxoid          Penicillin
Ampicillin               AMP          25
                                                Oxoid          Cephem
Cefotaxime               CTX          30
                                                Oxoid          Cephem
Cefpirome                CPO          30
                                                Oxoid          Phenicol
Chloramphenicol          C            30
                                                Oxoid          Fluoroquinolone
Ciprofloxacin            CIP          5
                                                Oxoid          Lincosamide
Clindamycin              DA           2
                                                Oxoid          Tetracycline
Doxycycline              DO           30
                                                Oxoid          Macrolide
Erythromycin             E            15
                                                Oxoid          Aminoglycoside
Gentamicin               CN           10
                                                Oxoid          Fluoroquinolone
Levofloxacin             LEV          5
                                                Oxoid          Oxazolidinone
Linezolid                LZD          30
                                                Oxoid          β-lactamase
Sulbactum/cefoperazone   SCF          105
                                                               inhibitor/Cephem
                                                Oxoid          Glycopeptide
Teicoplanin              TEC          30


                                                                                  17
MINIMUM INHIBITORY CONCENTRATION (MIC)

    MIC agaist Vancomycin Resistant Enterococci strains
    Agar dilution method was used to determine the MICs
    Stock solutions were prepared by using the formula
         1000/P x V x C = W

            P= potency given by the manufacturer (µg/mg),
            V= volume required (ml),
            C= final concentration of the solution (multiples of 1000) (mg/l),
            W= weight of antibiotic in mg to be dissolved in volume V (ml).
    These antibiotic stock solutions were used to make antibiotic dilutions
    Antibiotic dilution range of 0.25, 0.5, 1.0, 2, 4, 8, 16, 32, 64, 128, 256,
     512, 1024 μg/ml


                                                                                  18
Antibiotic powders used for determination of MIC


     S.No.    Antibiotic      Potency       Source        Solvent   Diluent


      1      Cefotaxime      950µg/mg    MP biomedicals    H2O       H2O

      2      Ciprofloxacin   995µg/mg    MP biomedicals    H2O       H2O

      3      Doxycycline     839µg/mg    MP biomedicals    H2O       H2O

                                                           95%
      4      Erythromycin    971µg/mg    MP biomedicals              H2O
                                                          Ethanol

      5      Vancomycin      1000µg/mg   MP biomedicals    H2O       H2O




                                                                       19
RESULTS




          20
Identification of Enterococci




  Colonies of Enterococci on
Chromocult® Enterococci agar.




                                                                                         21
                                Distribution of Enterococci isolated from different hospitals.
Distribution of Enerococci in different sample
sources of hospitals




                                                 22
Biochemical identification of species




  Tubes showing the result of Sugar fermentation by Enterococci


                                                                  23
24
Distribution of Enterococci Species in different hospitals.
Frequency of Vancomycin Resistant Enterococci (VRE)




Growth of vancomycin resistant enterococci on ChromID VRE media.
Violet colonies on the media shows vancomycin resistant Eneterococci faecium
                                                                          25
Frequency of Vancomycin resistant Enterococci VRE)
in three hospitals




                                                     26
Antibiotic Resistance profile of 54 VRE strains




                                                  27
Antibiotic sensitivity test plate




                                    28
MIC Values of Cefotaxime and Erythromycin against 54 VRE
                   strains

                             MIC, Cefotaxime
                  45                                        41
                  40
                  35
No. of Isolates




                  30
                  25                                                                   45                                                    41
                                                                                                        MIC, Erythromycin
                  20                                                                   40
                  15
                                                                                       35
                  10                              6
                         5                                                             30




                                                                     No. of Isolates
                  5                  2
                                                                                       25
                  0
                       64 mg/L   128 mg/L      256 mg/L   ≥512mg/L                     20

                                   MIC Values                                          15
                                                                                       10
                                                                                                             5
                                                                                       5            3              2
                                                                                             1                              1     1
                                                                                       0
                                                                                             0.5    2       4      8       64    128     ≥512
                                                                                            mg/L   mg/L    mg/L   mg/L    mg/L   mg/L    mg/L
                                                                                                             MIC Values
                                                                                                                                        29
MIC Values of Ciprofloxacin and Doxycycline against 54 VRE
                   strains
                  25
                                   MIC, Ciprofloxacin
                                                               20
                  20


                  15
No. of Isolates




                              10
                  10
                                        7                7           7

                  5                                                                          16                            15
                                               2                                                        MIC, Doxycycline
                        1                                                                    14
                  0
                                                                                             12            11                     11
                        4      8       16     32         64    128 ≥256                                            10
                       mg/L   mg/L    mg/L   mg/L       mg/L   mg/L mg/L                     10




                                                                           No. of Isolates
                                       MIC Values                                            8
                                                                                             6
                                                                                                                                          4
                                                                                             4      3
                                                                                             2
                                                                                             0
                                                                                                  4 mg/L 8 mg/L    16       32     64    128
                                                                                                                  mg/L     mg/L   mg/L   mg/L
                                                                                                                  MIC Values


                                                                                                                                              30
MIC results of Vancomycin against VRE strains



                             60
                                    52
                             50
                                                      MIC, Vancomycin
                             40
           No. of Isolates




                             30

                             20

                             10
                                                             2
                             0
                                  04 mg/L                 512 mg/L
                                         MIC Values


                                                                        31
Conclusions
   Most of the strains of the enterococci isolated were E. faecium followed
    by E. faecalis.
   Enterococci were mostly recovered by urine samples followed by pus,
    blood, wound and tissues.
   Enterococci displaying multidrug resistance and severe therapeutic
    problem, but their emergence in Pakistan still has not been well
    demonstrated
   Teicoplanin was the drug of choice against the enterococcal infections
    including those caused by VRE strains.
   Other than teicoplanin, linezolid and ampicillin could be used for
    treatment of enterococcal infections effectively.




                                                                      32
Recommendations
 Prudent use of vancomycin
 Education of hospital staff regarding the problem

 Rapid and accurate identification of VRE in the

  microbiology laboratory
 Aggressive infection control measures utilizing

  contact isolation and cohorting where necessary to
  prevent person-to-person transmission
 Effective interaction between microbiology lab and

  hospitals




                                                       33
Thanks for giving kind attention




                                   34

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Enterococcus

  • 1. Prevalence of Vancomycin-Resistant Enterococci (VRE) in the hospitalized patients of Islamabad and Rawappindi OBAID ULLAH Quaid-i-Azam University, Islamabad Member , American Society for Microbiology (ASM), USA. 1 Associate Member, International Federation of Infection Control (IFIC).
  • 2. Introduction - Nosocomial Infections  Nosocomial infections pose a continuing challenge  Defined as an infection which develops 48 hours after hospital admission or within 48 hours  1.7 million infections and 99,000 deaths annually  Organisms of current concern  Methicillin-resistant Staphylococcus aureus,  Glycopeptide-intermediate and resistant S aureus,  Vancomycin-resistant enterococci, and  Multidrugresistant Gram-negative bacteria 2
  • 3. Introduction - Enterococci  The 3rd cause of nosocomial infections.  Involved in over 800,000 infections per year in the USA in 2004  Gram(+) , Cocci.  Survive in 6.5% NaCl and at a pH of 9.6  Most capable of growing from 10 º to 45 º C range;  Survive at 60º C for 30 minutes  There are 23 species of Enterococci.  Two that account for the majority of human infections are: Enterococcus faecalis and Enterococcus faecium.  Part of the normal bowel flora. 3
  • 4. Resistance potential of Enterococci  Innately resistant to most antibiotics including:  Cephalosporins, Penicillins, Clindamycin and Trimethoprim  Can also acquire, accumulate and transfer genetic elements e.g. (plasmids, and transposons) using conjugation  Acquire Resistance  Macrolides  Tetracycline  Lincosamides  Chloramphenicol  Aminoglycosides  Penicillin (without beta-lactamase)  Penicillin (with beta-lactamase)  Vancomycin  Quinolones 4
  • 5. Enterococcal Infections and Risk Factors  Wide range of infections  Endocarditis, Septicemia, Urinary Tract Infections, Intra-abdominal and Wound Infections as well as infections of Indwelling Lines.  Having an underlying comorbid condition  Prolonged length of hospital stay  And close proximity to another VRE-colonized or -infected patient  Vancomycin has been used as the last resort to treat enterococcal infections 5
  • 6. Vancomycin Action and Resistance by Enterococci  Binding to the terminal D-alanyl-D-alanine residues → prevents crosslinking of the peptidoglycan component in the cell wall of G(+) organisms  Inhibits bacterial growth, eventually leading to death. D-alanyl-D-alanine residue ↓ D-alanyl-D-lactate moiety  Vancomycin cannot bind to this peptide 6
  • 7. Epidemiology in VRE  First described in Europe in 1989.  Primarily a nosocomial pathogen  Alarming increase  In the United States, prevalence as high as 47%  First case of VRE in Pakistan was reported in 2002 from Karachi  First case of VRE in Rawalpindi / Islamabad in 2003 by AFIP Uttley, A.H., George, R.C., Naidoo, J., Woodford, N., Johnson, A.P., Collins, C.H., Morrison, D., Gilfillan, A.J., Fitch, L.E. and Heptonstall, J. 1989. High-level vancomycin-resistant enterococci causing hospital infections. Epidemiol Infect 103:173−181. Khan, E., Sarwari A., Hassan, R., Ghori, S., Babar, I., O’Brien, F. and Grubb, W. 2002. Emergence of vancomycin resistant Enterococcus faecium at a tertiary care hospital in Karachi, Pakistan. J Hosp Infect; 52: 292-6. 7
  • 8. Treatment of VRE  Quinupristin-Dalfopristin (1999)  First antimicrobial agent available for the treatment  Inhibiting protein synthesis  Linezolid (2000)  Inhibits ribosomal protein synthesis  Daptomycin (2003)  Lipopeptide fermentation product of Streptomyces roseosporus  Disrupts multiple aspects of bacterial membrane  Tigecycline (2005 )  A broad-spectrum glycylcycline antimicrobial agent  Mannopeptimycins and Dalbavancin (Future treatments)  Semisynthetic glycopeptides 8
  • 9. Aim and Objectives of Current Study  To isolate and identify enterococci from different clinical specimens of three tertiary care hospitals of Rawalpindi and Islamabad.  Detection of Vancomycin resistant enterococci from the isolated strains.  Determination of frequency of VRE in Pakistan Institute of Medical Sciences, Shifa Internaional Hospital and Holy Family Hospital.  Checking the antibiotic susceptibility of different antibiotics against Vancomycin resistant enterococci (VRE).  To check the MIC (Minimum Inhibitory Concentration) of different antibiotics. 9
  • 11. MATERIAL  Blood agar (Oxoid),  Chromocult Enterococci Agar (Merck),  ChromID® VRE (Biomerieux),  Mueller Hinton agar (Oxoid),  Antibiotic discs (Oxoid),  Antibiotic powders (MP biomedics). 11
  • 12. Sampling  Three different hospitals of Islamabad and Rawalpindi  Pakistan Institute of Medical Sciences (P.I.M.S), Islamabad.  Shifa International Hospital, Islamabad.  Holy Family Hospital, Rawalpindi.  Specimens  Urine, Blood, Pus, Tissues, Surgical sites etc.  A total of 133 samples were collected in a period of 6 months (April, 2009- September, 2009). 12
  • 13. Isolation of Enterococci  Culturing on the Chromocult® Enterococci Agar (Merck).  Evaluation Red colonies with a diameter of 0.5 to 2 mm = Enterococci 13
  • 14. Identification of Enterococcus Species  By the Biochemical tests  Three tests were performed to identify the species  Arabinose fermentation, Sorbitol fermentation and Growth at 4°C 14
  • 15. Isolation of Vancomycin Resistant Enterococci  Enterococcus species were then sreaked on to the chromID™ VRE (Biomerieux) media  Contains two chromogenic substrates  alpha-Glucosidase & beta-Galactosidase  After 24hrs of incubation  Bluish-green colour = Vancomycin resistant E. faecalis  Violet colour = Vancomycin resistant E. faecium 15
  • 16. Antibiotic Susceptibility Testing  13 antibiotic discs were tested against VRE isolates  Performed on Mueller Hinton agar by Kirby-Bauer disc diffusion method 16
  • 17. Antibiotics used for disk diffusion test Antibiotic Abbreviation Potency Manufacturer Antibiotic class Oxoid Penicillin Ampicillin AMP 25 Oxoid Cephem Cefotaxime CTX 30 Oxoid Cephem Cefpirome CPO 30 Oxoid Phenicol Chloramphenicol C 30 Oxoid Fluoroquinolone Ciprofloxacin CIP 5 Oxoid Lincosamide Clindamycin DA 2 Oxoid Tetracycline Doxycycline DO 30 Oxoid Macrolide Erythromycin E 15 Oxoid Aminoglycoside Gentamicin CN 10 Oxoid Fluoroquinolone Levofloxacin LEV 5 Oxoid Oxazolidinone Linezolid LZD 30 Oxoid β-lactamase Sulbactum/cefoperazone SCF 105 inhibitor/Cephem Oxoid Glycopeptide Teicoplanin TEC 30 17
  • 18. MINIMUM INHIBITORY CONCENTRATION (MIC)  MIC agaist Vancomycin Resistant Enterococci strains  Agar dilution method was used to determine the MICs  Stock solutions were prepared by using the formula 1000/P x V x C = W  P= potency given by the manufacturer (µg/mg),  V= volume required (ml),  C= final concentration of the solution (multiples of 1000) (mg/l),  W= weight of antibiotic in mg to be dissolved in volume V (ml).  These antibiotic stock solutions were used to make antibiotic dilutions  Antibiotic dilution range of 0.25, 0.5, 1.0, 2, 4, 8, 16, 32, 64, 128, 256, 512, 1024 μg/ml 18
  • 19. Antibiotic powders used for determination of MIC S.No. Antibiotic Potency Source Solvent Diluent 1 Cefotaxime 950µg/mg MP biomedicals H2O H2O 2 Ciprofloxacin 995µg/mg MP biomedicals H2O H2O 3 Doxycycline 839µg/mg MP biomedicals H2O H2O 95% 4 Erythromycin 971µg/mg MP biomedicals H2O Ethanol 5 Vancomycin 1000µg/mg MP biomedicals H2O H2O 19
  • 20. RESULTS 20
  • 21. Identification of Enterococci Colonies of Enterococci on Chromocult® Enterococci agar. 21 Distribution of Enterococci isolated from different hospitals.
  • 22. Distribution of Enerococci in different sample sources of hospitals 22
  • 23. Biochemical identification of species Tubes showing the result of Sugar fermentation by Enterococci 23
  • 24. 24 Distribution of Enterococci Species in different hospitals.
  • 25. Frequency of Vancomycin Resistant Enterococci (VRE) Growth of vancomycin resistant enterococci on ChromID VRE media. Violet colonies on the media shows vancomycin resistant Eneterococci faecium 25
  • 26. Frequency of Vancomycin resistant Enterococci VRE) in three hospitals 26
  • 27. Antibiotic Resistance profile of 54 VRE strains 27
  • 29. MIC Values of Cefotaxime and Erythromycin against 54 VRE strains MIC, Cefotaxime 45 41 40 35 No. of Isolates 30 25 45 41 MIC, Erythromycin 20 40 15 35 10 6 5 30 No. of Isolates 5 2 25 0 64 mg/L 128 mg/L 256 mg/L ≥512mg/L 20 MIC Values 15 10 5 5 3 2 1 1 1 0 0.5 2 4 8 64 128 ≥512 mg/L mg/L mg/L mg/L mg/L mg/L mg/L MIC Values 29
  • 30. MIC Values of Ciprofloxacin and Doxycycline against 54 VRE strains 25 MIC, Ciprofloxacin 20 20 15 No. of Isolates 10 10 7 7 7 5 16 15 2 MIC, Doxycycline 1 14 0 12 11 11 4 8 16 32 64 128 ≥256 10 mg/L mg/L mg/L mg/L mg/L mg/L mg/L 10 No. of Isolates MIC Values 8 6 4 4 3 2 0 4 mg/L 8 mg/L 16 32 64 128 mg/L mg/L mg/L mg/L MIC Values 30
  • 31. MIC results of Vancomycin against VRE strains 60 52 50 MIC, Vancomycin 40 No. of Isolates 30 20 10 2 0 04 mg/L 512 mg/L MIC Values 31
  • 32. Conclusions  Most of the strains of the enterococci isolated were E. faecium followed by E. faecalis.  Enterococci were mostly recovered by urine samples followed by pus, blood, wound and tissues.  Enterococci displaying multidrug resistance and severe therapeutic problem, but their emergence in Pakistan still has not been well demonstrated  Teicoplanin was the drug of choice against the enterococcal infections including those caused by VRE strains.  Other than teicoplanin, linezolid and ampicillin could be used for treatment of enterococcal infections effectively. 32
  • 33. Recommendations  Prudent use of vancomycin  Education of hospital staff regarding the problem  Rapid and accurate identification of VRE in the microbiology laboratory  Aggressive infection control measures utilizing contact isolation and cohorting where necessary to prevent person-to-person transmission  Effective interaction between microbiology lab and hospitals 33
  • 34. Thanks for giving kind attention 34

Editor's Notes

  1. Obaid Khan 07/10/12
  2. Obaid Khan 07/10/12