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EMBL-Sustainable Access to the World's Largest Biomolecular Data Resources
The document outlines the role of EMBL as Europe’s center of excellence in life sciences, detailing its extensive resources, services, and infrastructure funded primarily through core support and competitive external funding. It emphasizes the organization’s commitment to providing sustainable access to vast biomolecular data resources for the scientific community, with significant usage statistics indicating high demand. EMBL fosters international collaboration and shapes science policy and strategy across its member states.
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EMBL-Sustainable Access to the World's Largest Biomolecular Data Resources
- 1. Sustainable access tothe world’s largest biomolecular data resources EMBL Rupert Lueck | EMBL
- 2. What is EMBL •Europe’s centre of excellence in life science research, services and training • Intergovernmental organization • 26 member states • 237 M€ budget • Majority is core funding by MS to run big infrastructure • Competitive external funding 2 28/11/2018
- 3. 6 Sites inEurope – over 1700 people – 80+ nationalities 3 28/11/2018 Structural biology Hamburg Life sciences Heidelberg Epigenetics and neurobiology Rome Bioinformatics Hinxton EMBL-EBI Structural biology Grenoble Tissue biology and disease modelling Barcelona
- 4. Advanced training EMBL’s missions 4 28/11/2018 Basic research Services Technology development &transfer Integration of life science research
- 5. Trusted Data Resources& Analysis Services Literature & ontologies • Experimental Factor Ontology • Gene Ontology • BioStudies • Europe PMC Chemical biology • ChEBI • ChEMBL • SureChEMBL Molecular structures • Protein Data Bank in Europe • Electron Microscopy Data Bank Gene, protein & metabolite expression • Expression Atlas • Metabolights • PRIDE • RNA Central Protein sequences, families & motifs • InterPro • Pfam • UniProt Genes, genomes & variation • Ensembl • Ensembl Genomes • GWAS Catalog • Metagenomics portal Systems • BioModels • BioSamples • Enzyme Portal • IntAct • Reactome Molecular Archives • European Nucleotide Archive • European Variation Archive • European Genome-phenome Archive • ArrayExpress • EMBL-EBI data • EMBL-EBI services • EGI & ELIXIR AAI Hosted and operated by EMBL-EBI Reusable Data – Curated, standardised, integrated, freely available and sustainable Tools & Services https://www.ebi.ac.uk/services
- 6. Big Data -Big Demand 38 million requests to EMBL-EBI websites every day EMBL-EBI delivered 152 million jobs to its users in 2016 Scientists at over 3.2 million unique IP addresses use EMBL-EBI websites 200 petabytes of storage capacity in our data centres
- 7. History of cloudactivities • Helix Nebula Science Cloud • Commercial Clouds • Embassy Cloud • GPU Cloud • EOSCpilot • EOSC-hub • EOSC-Life • ... 28/11/20187
- 8. EMBL Partnerships Integration oflife science research in Europe 8 28/11/2018 Shaping science policy and strategy Fostering international collaboration