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Importance of Biostatistics
in Biomedical Research
Dr. R.M. Pandey
Prof & Head
Department of Biostatistics
A.I.I.M.S., New Delhi
rmpandey@yahoo.com
Clinical Research
Definition
“Clinical research is a component of medical and
health research intended to produce knowledge
valuable for understanding disease, preventing and
treating illness, and promoting health”
US National Clinical Research SummitProject, 1998
2
Issues &Questions in BiomedicalResearch
ISSUE(S) QUESTION(S)
Normality Isa person sick or well?
Abnormality What abnormalities are associated with having adisease?
Diagnosis How accurate are diagnostic tests or strategies used to finda
disease?
Frequency How often does a diseaseoccur?
Risk What factors are associated with an increased likelihood of disease?
Prognosis What are the consequences of having adisease?
Prevention Does intervention on people without diseasework?
Does early detection and treatment improve the course ofdisease?.
Cause What condition results in adisease?
What are the pathogenetic mechanisms ofdisease?
Evidence Based Alliance
Clinical
Expertise
Research
Evidence
Patient
Preferences
Clinically relevant, patient
centred, research about:
• Diagnosis
• Prognosis
• Interventions
The ability to use our
clinical skills and past
experience to rapidly
identify each patient's
• unique health state and
diagnosis,
• their individual risks,
• the benefits of potential
interventions, and their
• personal valuesand
expectations.
The unique
preferences,
concerns and
expectations of each
patient
4
EBM
EBM. Sackett etal 1996
Evidence Based Alliance?
Expertise
Research
Evidence
Patient
Preferences
EBM
Our clinical experience
alone may not improve
our patient’s lives
Clinical
Are ourpatients
always able to judge
what is best for
them?
Alot of research is
not aimed at
improving the
lives of patients!
Who asksthem?
5
6
The Research Question
• All studies should start with a research question
that addresses what the investigator would like to
know
• Goal is to find an important research question
that can be developed into a feasible and valid
study plan
Research Questions
Primary/ Secondary
1. What is the prevalence of a condition?.
2. What is the average (Mean) of a characteristics?
3. What is the strength of correlation between two quantitative parameters?
4. What is the agreement between methods?
5. What are the diagnostic characteristics of a candidate test
(categorical/quantitative) with reference to a “Gold Standard”?.
6. What is incidence of an outcome?.
7. What are the predictors of an outcome?
8. What are the risk factors associated with an outcome?
9. Evaluation of a candidate intervention against a control (standard of car7e)?.
Population vs. Sample
8
9
Population Sample
Parameter Statistic
Sampling variation
Drawing
Conclusions
Designing &
Implementing
TRUTH IN THE
UNIVERSE
Research
Question
TRUTH IN THE
STUDY
Study
Plan
FINDINGS IN
THE STUDY
Actual
Study
Infer Infer
Design Implement
Process of Research Project
10
11
Overview of Study Designs in Clinical
Research
12
12
Variables
Outcome
Exposures
Confounder(s)
13
Total variability = True variability + Error
Sources of Error in Measurements
• Observer
• Subject
• Instrument
14
Random
Systematic
Systolic
Blood
Pressure
Time 24 hr
Types of Variability
15
Two questions asked at the end
• Validity the study results?
• Reliability of the study results?
Illustration of the Difference Between
Precision and Accuracy
Hulley & Cummings, Designing Clinical Research, 1
17
988.
Good Precision
PoorAccuracy
Poor Precision
Good Accuracy
Good Precision
Good Accuracy
Poor Precision
PoorAccuracy
Illustration of the Difference Between
Precision and Accuracy
Hulley & Cummings, Designing Clinical Research, 1981
8
8.
19
Validity and Reliability of both
: Measurements, and Studyresult
• Validity :
– Asking - Are we measuring/estimating what we think we
are meaning?
• Reliability :
– Asking - How reproducible is the value/study result ?
STATISTICALMETHODS, IF USED PROPERLY,
PROVIDES VALID AND RELIABLE RESULTS
Statistical
Methods
Research
Methods in Health
Sciences
Computing Skills
BIOSTATISTICS
21
Statistical Methods
I. Design Stage
Sample Size
Sampling/Randomization
Data Management Plan
Data Analysis Plan
II. Analysis Stage
Descriptive Analysis
Inferential analysis
III.Interpretation &Publication
Statistical Methods (Analysis)
I. Descriptive Methods :
Tables
Diagrams
Summary : Univariable,
Bivariable strength
Multivariable
II. Inferential Methods :
 Estimation
 Point Estimation
Mean /proportion
etc.
 Interval Estimation
i.e. Confidence interval of
point estimate
 Hypotheses Testing
 Comparison between
the treatments
 Association
 Etc.
22
Five Important Terms
Outcome
Exposures
Bias
Confounder(s)
Chance factor
23
Variables
24
Functional
Relationsh
ip
Measurement/Analysis
Categorical Quantitative Time to an event
Outcome
√ √ √
Exposure
√ √ x
Other factors
• Confounder/s
• Effect modifier/s
• Interaction
√
√
√
√
√
√
x
x
x
25
Descriptive Analysis
• One variable (uni-variable)
– Qualitative
– Quantitative
– Time to an event
• Two variables (Bivariable)
– Qualitative vs Qualitative
– Qualitative vs Quantitative
– Quantitative vs Quantitative
• More than two variables (Multivariable)
26
Measures of Associations
• Measures of association are mathematical
comparisons
• Mathematical comparisons can be done in
– absolute terms, or
– relative terms
27
Absolute and RelativeMeasures
Risk Difference (Absolute Measures)
Relative Risk (Risk Ratio)
Odds Ratio
Rate Ratio
Each one gives a different perspective
Each one appeals to different constituencies
Observed Exposure-Outcome
Association :Possibilities
The observed statistical association between a certainoutcome
and the hypothesized exposure could be the result of
systematic errors in collection of data (sampling, disease and
exposure ascertainment) or its interpretation
- role of bias
Or it could be due to the effect of additional variables that
might be responsible for the observedassociation
- role of confounding variable(s)
Or it could be just a matter of chance
Or it could be a realassociation
29
Confounding
• Confounding is a distortion in a measure
of effect that may arise because we fail to
control for other variables that are
previously known risk factors for the health
outcome being studied.
30
Confounding
• Confounding can lead to the observation of
apparent differences between the study
groups when they do not truly exist, or
conversely, the observation of of no
difference when they do exist.
31
Confounding variable
• It is an independent risk factor(cause) of
outcome)
• It is unevenly distributed among exposed
and unexposed
• It is not on the causal pathway between
exposure and outcome
32
THE DIFFERENCE BETWEEN
BIAS AND CONFOUNDING
 Bias creates an association that is not true,
 Confounding describes an association that
is true, but potentially misleading.
33
EXAMPLES OF RANDOM ERROR, BIAS,
MISCLASSIFICATION AND CONFOUNDING IN THE
SAME STUDY:
Cohort study: babies of women who bottle
feed and women who breast feed are
compared,
it is found that the incidence of
gastroenteritis, as recorded in medical
records, is lower in the babies who are
breast-fed.
34
EXAMPLE OF RANDOM ERROR
By chance, there are more episodes of
gastroenteritis in the bottle-fed group in the study
sample, producing a type 1error. (When in truth
breast feeding is not protective against
gastroenteritis).
Or, also by chance, no difference in risk was found,
producing a type 2error (When in truth breast
feeding is protective against gastroenteritis).
35
EXAMPLE OF RANDOM
MISCLASSIFICATION
Lack of good information on feeding history
results in some breast-feeding mothers being
randomly classified as bottle-feeding, and vice-
versa.
If this happens, the study finding
underestimates the true RR,whichever feeding
modality is associated with higher disease
incidence, producing a type 2 error.
36
EXAMPLE OF BIAS
The medical records of bottle-fed babies
only are less complete (perhaps bottle fed
babies go to the doctor less) than those of
breast fed babies, and thus record fewer
episodes of gastro-enteritis in them only.
This is called bias because the observation
itself is in error.
37
EXAMPLE OF CONFOUNDING
The mothers of breast-fed babies are of higher social
class, and the babies thus have better hygiene, less
crowding and perhaps other factors that protect against
gastroenteritis.
Less crowding and better hygiene are truly protective
against gastroenteritis, but we mistakenly attribute
their effects to breast feeding. This is called
confounding because the observation is correct, but its
explanation is wrong.
38
Bivariate Association Between
Smoking Status and Risk of Death
Bivariate Non-
smokers
Former
smokers
Recent
quitters
Persistent
smokers
Relative risk of
death
1.0 (ref.) 1.08
(0.92-1.26)
0.56
(0.40-0.77)
0.74
(0.59-0.94)
Hasdai, D., et al. “Effect of smoking status on the long-term outcome after
successful percutaneous coronary revascularization.” N. Engl. J. Med. 1997;
336:755-61.
Various other studies have also found similar results. It is known as Smoker’s
paradox
39
Association Between Demographicand
Clinical Factors and Smoking Status
Non-
smokers
Former
smokers
Recent
quitters
Persistent
smokers
Age, year + SD 67 + 11 65 + 10 56 + 10 55 + 11
Duration of angina, month + SD 41 + 66 51 + 72 21 + 46 29 + 55
Diabetes, % 21% 18% 8% 10%
Hypertension, % 54% 48% 38% 39%
Extent of coronary artery disease, %
One vessel 50% 51% 57% 55%
Two vessels 36% 36% 34% 36%
Three vessels 14% 13% 10% 9%
Hasdai, D., et al. “Effect of smoking status on the long-term outcome after
successful
percutaneous coronary revascularization.” N. Engl. J. Med. 1997; 336:755-61.
40
Comparison of Bivariate and
Multivariable Association Between
Smoking Status and Risk of Death
Non-
smokers
Former smokers Recent quitters Persistent
smokers
Relative risk of death
Bivariate 1.0 (ref.) 1.08
(.92-1.26)
0.56
(.40-.77)
0.74
(.59-.94)
Relative risk of death
Multivariable 1.0 (ref.) 1.34
(1.14-1.57)
1.21
(.87-1.70)
1.76
(1.37-2.26)
Hasdai, D., et al. “Effect of smoking status on the long-term outcome after
successful
percutaneous coronary revascularization.” N. Engl. J. Med. 1997; 336:755-61.
Intervening Variable
• An intervening variable is on the causal pathway to the
outcome
Camargo, C.A, Stampfer,M.J. ,et al. “Moderate alcohol consumption and risk of angina pectoris in myocardial infarction
in U.S. male physians” Ann. Intern. Med. 1997;126:372-5.
41
Study Designs
Cross-Sectional
Case-Control
Cohort
Clinical Trial
Objective(s)
Secondary
Primary
Burden
-Prev, mean
Hypothesis generation
Prev of RF’s & Measures of Assoc.
Association Hypothesis generation
Prev of RF’s in Case-Control & Measures of Assoc.
Cause-Effect Hypothesis generation
Incidence of outcome(s), Measures of Assoc.
Cause-Effect Hypothesis generation
Incidence of outcome(s), Measures of Assoc.
What to compute?
42
• Statistical Analysis is a computing problem: Avoid Such a thinking
• Prevention is Cost-Effective: Also true for Biostatistics
• Preventive measures:
1. Must have knowledge of Principles of Research Methods & Biostatistics.
2. Develop computing skills
43
44
you
Thank You

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Dr. RM Pandey -Importance of Biostatistics in Biomedical Research.pptx

  • 1. Importance of Biostatistics in Biomedical Research Dr. R.M. Pandey Prof & Head Department of Biostatistics A.I.I.M.S., New Delhi rmpandey@yahoo.com
  • 2. Clinical Research Definition “Clinical research is a component of medical and health research intended to produce knowledge valuable for understanding disease, preventing and treating illness, and promoting health” US National Clinical Research SummitProject, 1998 2
  • 3. Issues &Questions in BiomedicalResearch ISSUE(S) QUESTION(S) Normality Isa person sick or well? Abnormality What abnormalities are associated with having adisease? Diagnosis How accurate are diagnostic tests or strategies used to finda disease? Frequency How often does a diseaseoccur? Risk What factors are associated with an increased likelihood of disease? Prognosis What are the consequences of having adisease? Prevention Does intervention on people without diseasework? Does early detection and treatment improve the course ofdisease?. Cause What condition results in adisease? What are the pathogenetic mechanisms ofdisease?
  • 4. Evidence Based Alliance Clinical Expertise Research Evidence Patient Preferences Clinically relevant, patient centred, research about: • Diagnosis • Prognosis • Interventions The ability to use our clinical skills and past experience to rapidly identify each patient's • unique health state and diagnosis, • their individual risks, • the benefits of potential interventions, and their • personal valuesand expectations. The unique preferences, concerns and expectations of each patient 4 EBM EBM. Sackett etal 1996
  • 5. Evidence Based Alliance? Expertise Research Evidence Patient Preferences EBM Our clinical experience alone may not improve our patient’s lives Clinical Are ourpatients always able to judge what is best for them? Alot of research is not aimed at improving the lives of patients! Who asksthem? 5
  • 6. 6 The Research Question • All studies should start with a research question that addresses what the investigator would like to know • Goal is to find an important research question that can be developed into a feasible and valid study plan
  • 7. Research Questions Primary/ Secondary 1. What is the prevalence of a condition?. 2. What is the average (Mean) of a characteristics? 3. What is the strength of correlation between two quantitative parameters? 4. What is the agreement between methods? 5. What are the diagnostic characteristics of a candidate test (categorical/quantitative) with reference to a “Gold Standard”?. 6. What is incidence of an outcome?. 7. What are the predictors of an outcome? 8. What are the risk factors associated with an outcome? 9. Evaluation of a candidate intervention against a control (standard of car7e)?.
  • 10. Drawing Conclusions Designing & Implementing TRUTH IN THE UNIVERSE Research Question TRUTH IN THE STUDY Study Plan FINDINGS IN THE STUDY Actual Study Infer Infer Design Implement Process of Research Project 10
  • 11. 11
  • 12. Overview of Study Designs in Clinical Research 12 12
  • 14. Total variability = True variability + Error Sources of Error in Measurements • Observer • Subject • Instrument 14
  • 16. Two questions asked at the end • Validity the study results? • Reliability of the study results?
  • 17. Illustration of the Difference Between Precision and Accuracy Hulley & Cummings, Designing Clinical Research, 1 17 988.
  • 18. Good Precision PoorAccuracy Poor Precision Good Accuracy Good Precision Good Accuracy Poor Precision PoorAccuracy Illustration of the Difference Between Precision and Accuracy Hulley & Cummings, Designing Clinical Research, 1981 8 8.
  • 19. 19 Validity and Reliability of both : Measurements, and Studyresult • Validity : – Asking - Are we measuring/estimating what we think we are meaning? • Reliability : – Asking - How reproducible is the value/study result ? STATISTICALMETHODS, IF USED PROPERLY, PROVIDES VALID AND RELIABLE RESULTS
  • 21. 21 Statistical Methods I. Design Stage Sample Size Sampling/Randomization Data Management Plan Data Analysis Plan II. Analysis Stage Descriptive Analysis Inferential analysis III.Interpretation &Publication
  • 22. Statistical Methods (Analysis) I. Descriptive Methods : Tables Diagrams Summary : Univariable, Bivariable strength Multivariable II. Inferential Methods :  Estimation  Point Estimation Mean /proportion etc.  Interval Estimation i.e. Confidence interval of point estimate  Hypotheses Testing  Comparison between the treatments  Association  Etc. 22
  • 24. Variables 24 Functional Relationsh ip Measurement/Analysis Categorical Quantitative Time to an event Outcome √ √ √ Exposure √ √ x Other factors • Confounder/s • Effect modifier/s • Interaction √ √ √ √ √ √ x x x
  • 25. 25 Descriptive Analysis • One variable (uni-variable) – Qualitative – Quantitative – Time to an event • Two variables (Bivariable) – Qualitative vs Qualitative – Qualitative vs Quantitative – Quantitative vs Quantitative • More than two variables (Multivariable)
  • 26. 26 Measures of Associations • Measures of association are mathematical comparisons • Mathematical comparisons can be done in – absolute terms, or – relative terms
  • 27. 27 Absolute and RelativeMeasures Risk Difference (Absolute Measures) Relative Risk (Risk Ratio) Odds Ratio Rate Ratio Each one gives a different perspective Each one appeals to different constituencies
  • 28. Observed Exposure-Outcome Association :Possibilities The observed statistical association between a certainoutcome and the hypothesized exposure could be the result of systematic errors in collection of data (sampling, disease and exposure ascertainment) or its interpretation - role of bias Or it could be due to the effect of additional variables that might be responsible for the observedassociation - role of confounding variable(s) Or it could be just a matter of chance Or it could be a realassociation
  • 29. 29 Confounding • Confounding is a distortion in a measure of effect that may arise because we fail to control for other variables that are previously known risk factors for the health outcome being studied.
  • 30. 30 Confounding • Confounding can lead to the observation of apparent differences between the study groups when they do not truly exist, or conversely, the observation of of no difference when they do exist.
  • 31. 31 Confounding variable • It is an independent risk factor(cause) of outcome) • It is unevenly distributed among exposed and unexposed • It is not on the causal pathway between exposure and outcome
  • 32. 32 THE DIFFERENCE BETWEEN BIAS AND CONFOUNDING  Bias creates an association that is not true,  Confounding describes an association that is true, but potentially misleading.
  • 33. 33 EXAMPLES OF RANDOM ERROR, BIAS, MISCLASSIFICATION AND CONFOUNDING IN THE SAME STUDY: Cohort study: babies of women who bottle feed and women who breast feed are compared, it is found that the incidence of gastroenteritis, as recorded in medical records, is lower in the babies who are breast-fed.
  • 34. 34 EXAMPLE OF RANDOM ERROR By chance, there are more episodes of gastroenteritis in the bottle-fed group in the study sample, producing a type 1error. (When in truth breast feeding is not protective against gastroenteritis). Or, also by chance, no difference in risk was found, producing a type 2error (When in truth breast feeding is protective against gastroenteritis).
  • 35. 35 EXAMPLE OF RANDOM MISCLASSIFICATION Lack of good information on feeding history results in some breast-feeding mothers being randomly classified as bottle-feeding, and vice- versa. If this happens, the study finding underestimates the true RR,whichever feeding modality is associated with higher disease incidence, producing a type 2 error.
  • 36. 36 EXAMPLE OF BIAS The medical records of bottle-fed babies only are less complete (perhaps bottle fed babies go to the doctor less) than those of breast fed babies, and thus record fewer episodes of gastro-enteritis in them only. This is called bias because the observation itself is in error.
  • 37. 37 EXAMPLE OF CONFOUNDING The mothers of breast-fed babies are of higher social class, and the babies thus have better hygiene, less crowding and perhaps other factors that protect against gastroenteritis. Less crowding and better hygiene are truly protective against gastroenteritis, but we mistakenly attribute their effects to breast feeding. This is called confounding because the observation is correct, but its explanation is wrong.
  • 38. 38 Bivariate Association Between Smoking Status and Risk of Death Bivariate Non- smokers Former smokers Recent quitters Persistent smokers Relative risk of death 1.0 (ref.) 1.08 (0.92-1.26) 0.56 (0.40-0.77) 0.74 (0.59-0.94) Hasdai, D., et al. “Effect of smoking status on the long-term outcome after successful percutaneous coronary revascularization.” N. Engl. J. Med. 1997; 336:755-61. Various other studies have also found similar results. It is known as Smoker’s paradox
  • 39. 39 Association Between Demographicand Clinical Factors and Smoking Status Non- smokers Former smokers Recent quitters Persistent smokers Age, year + SD 67 + 11 65 + 10 56 + 10 55 + 11 Duration of angina, month + SD 41 + 66 51 + 72 21 + 46 29 + 55 Diabetes, % 21% 18% 8% 10% Hypertension, % 54% 48% 38% 39% Extent of coronary artery disease, % One vessel 50% 51% 57% 55% Two vessels 36% 36% 34% 36% Three vessels 14% 13% 10% 9% Hasdai, D., et al. “Effect of smoking status on the long-term outcome after successful percutaneous coronary revascularization.” N. Engl. J. Med. 1997; 336:755-61.
  • 40. 40 Comparison of Bivariate and Multivariable Association Between Smoking Status and Risk of Death Non- smokers Former smokers Recent quitters Persistent smokers Relative risk of death Bivariate 1.0 (ref.) 1.08 (.92-1.26) 0.56 (.40-.77) 0.74 (.59-.94) Relative risk of death Multivariable 1.0 (ref.) 1.34 (1.14-1.57) 1.21 (.87-1.70) 1.76 (1.37-2.26) Hasdai, D., et al. “Effect of smoking status on the long-term outcome after successful percutaneous coronary revascularization.” N. Engl. J. Med. 1997; 336:755-61.
  • 41. Intervening Variable • An intervening variable is on the causal pathway to the outcome Camargo, C.A, Stampfer,M.J. ,et al. “Moderate alcohol consumption and risk of angina pectoris in myocardial infarction in U.S. male physians” Ann. Intern. Med. 1997;126:372-5. 41
  • 42. Study Designs Cross-Sectional Case-Control Cohort Clinical Trial Objective(s) Secondary Primary Burden -Prev, mean Hypothesis generation Prev of RF’s & Measures of Assoc. Association Hypothesis generation Prev of RF’s in Case-Control & Measures of Assoc. Cause-Effect Hypothesis generation Incidence of outcome(s), Measures of Assoc. Cause-Effect Hypothesis generation Incidence of outcome(s), Measures of Assoc. What to compute? 42
  • 43. • Statistical Analysis is a computing problem: Avoid Such a thinking • Prevention is Cost-Effective: Also true for Biostatistics • Preventive measures: 1. Must have knowledge of Principles of Research Methods & Biostatistics. 2. Develop computing skills 43