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Diagnosis of Tuberculosis
part – 2
Presentation by : - Dr.Darshna Sarvaiya
1st year resident
Community Medicine
1
Diagnostic Steps
History and clinical examination
Radiographic features
Bacteriological Evaluation
2
History and clinical examination
 “The first rule of TB diagnosis : is to think of TB….”
 The physician includes TB in his differential diagnosis when history &
symptoms are consistent with TB diagnosis
He will recommended appropriate diagnostic tests to
prove the infection .
3
4
Radiographic features
 Infiltrate or consolidation - Opacification of airspaces within the lung
parenchyma. Consolidation or infiltrate can be dense or patchy and might
have irregular, ill-defined, or hazy borders.
5
Any cavitary lesion - Lucency (darkened area) within the lung parenchyma, with or without
irregular margins that might be surrounded by an area of airspace consolidation . The walls
surrounding the lucent area can be thick or thin. Calcification can exist around a cavity.
6
Nodule with poorly defined margins - (tree-in-bud sign[3])
7
Hilar lymphadenopathy (bihilar lymphadenopathy)
8
 Milliary tuberculosis
9
10 Bacteriological Evaluation
Conventional diagnostic method
(smear , culture )
Immunological diagnosis
(Tuberculin test)
New diagnostic methods (NAAT
, BACTEC , MGIT ,CB-NAAT)
 Most confirmatory test for pulmonary
 Simple , appropriate technology which is relatively easy to perform and read
 Single direct smear  miss about 25 % of sputum positive cases
11
Conventional diagnostic methods
( Smear , Culture )
Sputum examination :
Sputum collection
12
Day 1 Sample 1 Patients provide an “ on –
the –spot” sample under
supervision when
presenting to the health
facility , give the patient a
sputum container to take
home for an early
morning sample the
following morning
Day 2 Sample 2 Patient brings an early
morning sample
Note : volume of sputum  3 ml – 6 ml ( minimum acceptable amount ; 2 ml )
Characteristic of a Good sputum specimen
 5 – 10 ml
 Thick and mucous , but may be fluid with pieces purulent material
 Colour varies from opaque white to green, but reddish to brown
when blood is present
13
ZN ( ZIEHL NEELSEN ) staining
 Procedure :
• make the smear on a clean glass slide , the slide with the smear up about three
time slowly through a flame.
• Cover with Carbol fuchsin , kept for 5-7 min with stem gently over direct flame (
till fumes arise ) , wash with water
• Decolourize in 3.0 % acid alcohol ,until only a faint pink colour remains , wash with
water
• Counter stain for 1 minute with Loeffler’s methylene blue , wash with water
• Air dry and observe under oil immersion objectives of microscope
14
Slide reporting
15
Number of bacilli Result reported
No AFB per 100 oil immersion fields 0
1-9 AFB per 100 oil immersion fields Scanty
10-99 AFB per 100 oil immersion fields + ( 1 + )
1-10 AFB per oil immersion fields ++ ( 2 +)
> 10 AFB per oil immersion fields +++ ( 3 +)
Sputum smear microscopy for tubercle bacilli is positive when there are at least
10,000 organisms present per ml of sputum
16 False positive result : sputum smear result is positive even through the
patient does not really have sputum smear positive PTB
Acid fast particle and other micro organisms
( nocardia , other mycobacteria )
False negative result : sputum smear result is negative even through the pt.
does have sputum smear positive PTB
Inadequate sputum collection , failure to select suitable sputum particle for
making smear , poor smear preparation and inadequate examination of
smear
Fluorescence microscopy
 The smear may be stained by
auramine – o dye . In this
method the TB bacilli are
stained yellow against dark
background & easily visualized
using florescent microscope
17
Advantages
 Faster staining than ZN
 More sensitive than ZN
 Do not require oil –immersion
 No heat require for staining
 Fluorescence stain slide can be subjected to ZN stain
18
Light emitted diode fluorescence microscopy ( LEDs)
 Less expensive
 In recent WHO evaluation, the diagnostic accuracy of LED microscopy was found
to be comparable to that of conventional fluorescence microscopy and superior
to that of conventional Z-N microscopy
 Much large area of the smear to be seen
 More rapid examination of the specimen and making it easier to count bacilli
19
Limitations
 LED microscope require ( costly )
 -ve staining does not indicate specimen will be culture negative
 Auramine rhodamine  possible carcinogen
 KMNO4 / acid alcohol – strong irritant
 Stained slide should be examined within 24 hour (fluorescent
fading )
20
Culture tests
 Lowenstein –Jensen ( egg and also contain high concentration of malachite green
to overcome contamination with other bacteria )
 Middlebrooks 7H10 & 7H11 are (contain defined vitamins , salts , catalase , glycerol
, oleic acid and albumin to neutralize toxic effect of fatty acids )
 Liquid media such as Middle brook 7H9 broth
 culture required ( 6-8 )weeks for weeks for isolation from media
 Drug sensitivity to Anti-TB require additional 4 weeks
21
22
23
Mantoux test :
Dose : 1 TU of PPD in 0.1 ml intradermally
Area : flexor surface of the left forearm , mid way
between wrist & elbow
Result : read after 48-96 hours but 72 hour is ideal
Reaction : Erythema & Induration
>10 mm = positive
< 6 mm = negative
Immunological diagnosis
(Tuberculin test )
24
Two step testing
 Use two – step testing for initial skin testing of adults who will be
retested within 1-3 weeks
- If first test (+) ,consider the person infected
- If first test (-) , give second test 1-3 weeks later
- If second test (+) , consider person infected
- If second test (- ) , consider person uninfected
25
26 Newer diagnostic method
 Radiometric BACTEC 460 TB method system
 MGIT 960 Mycobacteria detection system
 MB/ BACT System
 Nucleic acid amplification test (NAAT)
 Cartridge based nucleic acid amplification test
(CB-NAAT)
Radiometric BACTEC 460 TB method
 Where in C labelled palmitic acid in 7H12 medium is used
 Growth is ascertained by liberation of 14CO2 as metabolized by
mycobacteria measure by BACTEC system instrument
 Average time : 8 days
 Can also be used for drug susceptibility testing
 Drawbacks :
- High cost
- Disposal of radioactive waste
27
MGIT( mycobacterial growth indicator tube) 960
 Rapid method
 Consist of round bottom tubes containing 4 ml of modified middlebrook
7H9 broth which has an oxygen sensitive fluorescent sensor at the
bottom
 When mycobacteria grow , they deplete the dissolved oxygen in the
broth & allow the indicator to fluoresce brightly in a 365 nm UV light
 Positive signal obtain in 10 – 12 days
28
Advantages of MGIT
 All type of specimens
 Continuously monitored
 Positive signals over 10 -12 days
 Non-radiometric
 Cheaper than BACTEC
29
MB/ BacT system
 Non radiometric continuous monitoring system
 Based on calorimetric detection of CO2
 Slightly longer time than BACTEC ( 14 days )
 Prone to contamination
30
Detection and identification of mycobacteria directly clinical
sample
 Genotyping methods
- PCR ( polymerase chain reaction )
- LAMP ( loop mediated isothermal amplification )
- TMA ( transcription mediated amplification )
- Nucleic acid amplification ( NAA )
- Cartridge based nucleic acid amplification test ( CB- NAAT )
 Phenotypic methods
- FAST plaque TB method
31
Nucleic acid amplification tests (NAAT)
 Amplifying M. tuberculosis nucleic acid sequence using a nucleic
acid probe
 Sensitivity at least 80 % in most studies
 Requires 10 bacilli / ml of given sample
 Specificity 98 % to 99%
32
Xpert MTB / RIF
 Automated , cartridge – based nucleic acid amplification test ( CB-
NAAT )
 Detect DNA sequence specific for m. tuberculosis and rifampicin
resistance
 Results are obtain from unprocessed sputum sample in 90 min
33
34
35
Advantages – Xpert MTB /RIF
 Simultaneously detect M.tuberculosis and rifampicin resistance in less
than 2 hours
 The sensitivity for detecting TB is similar to that of to liquid culture (
sensitivity 88 % ) ; the specificity is also high(99 %)
 The superior performance of Xpert MTB / RIF in detecting TB over that
of microscopy makes it a particular useful tool for case –finding among
people living with HIV
36
Disadvantages
 A stable uninterrupted electrical supply is needed
 The ambient operating temperature of the instrument cannot
exceed 30degree Celsius , cartridge must be stored at less than 28
degree Celsius
 The shelf – life of the cartridge must be monitored to prevent them
from expiring before they are used
 Security measure must be put in place to prevent the theft of the
accompanying laptop or desktop computer
37
LAMP ( loop mediated isothermal amplification )
 It is a novel nucleic acid amplification method in which reagents
react under isothermal conditions with high specificity , efficiency
and rapidity
 LAMP is used for detection of M.TB complex , M.avium , and M.
intracellular directly from sputum specimen as well as for detection
of culture isolate grown in a liquid medium (MGIT ) or on a solid
medium (Ogawa’s medium )
38
 This method employs a DNA polymerase an a set of four specially
designed primers that recognize a total of six distinct sequence on the
target DNA
 Species – specific primers were designed by targeting the gyrB gene
 Simple procedure , starting with the mixing of all reagents in a single tube
, followed by an isothermal reaction during which the reaction mixture is
held at 63celsus
 60 min incubation time
39
40
Thank you …!!!
41

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Diagnosis of tuberculosis.pptx

  • 1. Diagnosis of Tuberculosis part – 2 Presentation by : - Dr.Darshna Sarvaiya 1st year resident Community Medicine 1
  • 2. Diagnostic Steps History and clinical examination Radiographic features Bacteriological Evaluation 2
  • 3. History and clinical examination  “The first rule of TB diagnosis : is to think of TB….”  The physician includes TB in his differential diagnosis when history & symptoms are consistent with TB diagnosis He will recommended appropriate diagnostic tests to prove the infection . 3
  • 5.  Infiltrate or consolidation - Opacification of airspaces within the lung parenchyma. Consolidation or infiltrate can be dense or patchy and might have irregular, ill-defined, or hazy borders. 5
  • 6. Any cavitary lesion - Lucency (darkened area) within the lung parenchyma, with or without irregular margins that might be surrounded by an area of airspace consolidation . The walls surrounding the lucent area can be thick or thin. Calcification can exist around a cavity. 6
  • 7. Nodule with poorly defined margins - (tree-in-bud sign[3]) 7
  • 10. 10 Bacteriological Evaluation Conventional diagnostic method (smear , culture ) Immunological diagnosis (Tuberculin test) New diagnostic methods (NAAT , BACTEC , MGIT ,CB-NAAT)
  • 11.  Most confirmatory test for pulmonary  Simple , appropriate technology which is relatively easy to perform and read  Single direct smear  miss about 25 % of sputum positive cases 11 Conventional diagnostic methods ( Smear , Culture ) Sputum examination :
  • 12. Sputum collection 12 Day 1 Sample 1 Patients provide an “ on – the –spot” sample under supervision when presenting to the health facility , give the patient a sputum container to take home for an early morning sample the following morning Day 2 Sample 2 Patient brings an early morning sample Note : volume of sputum  3 ml – 6 ml ( minimum acceptable amount ; 2 ml )
  • 13. Characteristic of a Good sputum specimen  5 – 10 ml  Thick and mucous , but may be fluid with pieces purulent material  Colour varies from opaque white to green, but reddish to brown when blood is present 13
  • 14. ZN ( ZIEHL NEELSEN ) staining  Procedure : • make the smear on a clean glass slide , the slide with the smear up about three time slowly through a flame. • Cover with Carbol fuchsin , kept for 5-7 min with stem gently over direct flame ( till fumes arise ) , wash with water • Decolourize in 3.0 % acid alcohol ,until only a faint pink colour remains , wash with water • Counter stain for 1 minute with Loeffler’s methylene blue , wash with water • Air dry and observe under oil immersion objectives of microscope 14
  • 15. Slide reporting 15 Number of bacilli Result reported No AFB per 100 oil immersion fields 0 1-9 AFB per 100 oil immersion fields Scanty 10-99 AFB per 100 oil immersion fields + ( 1 + ) 1-10 AFB per oil immersion fields ++ ( 2 +) > 10 AFB per oil immersion fields +++ ( 3 +) Sputum smear microscopy for tubercle bacilli is positive when there are at least 10,000 organisms present per ml of sputum
  • 16. 16 False positive result : sputum smear result is positive even through the patient does not really have sputum smear positive PTB Acid fast particle and other micro organisms ( nocardia , other mycobacteria ) False negative result : sputum smear result is negative even through the pt. does have sputum smear positive PTB Inadequate sputum collection , failure to select suitable sputum particle for making smear , poor smear preparation and inadequate examination of smear
  • 17. Fluorescence microscopy  The smear may be stained by auramine – o dye . In this method the TB bacilli are stained yellow against dark background & easily visualized using florescent microscope 17
  • 18. Advantages  Faster staining than ZN  More sensitive than ZN  Do not require oil –immersion  No heat require for staining  Fluorescence stain slide can be subjected to ZN stain 18
  • 19. Light emitted diode fluorescence microscopy ( LEDs)  Less expensive  In recent WHO evaluation, the diagnostic accuracy of LED microscopy was found to be comparable to that of conventional fluorescence microscopy and superior to that of conventional Z-N microscopy  Much large area of the smear to be seen  More rapid examination of the specimen and making it easier to count bacilli 19
  • 20. Limitations  LED microscope require ( costly )  -ve staining does not indicate specimen will be culture negative  Auramine rhodamine  possible carcinogen  KMNO4 / acid alcohol – strong irritant  Stained slide should be examined within 24 hour (fluorescent fading ) 20
  • 21. Culture tests  Lowenstein –Jensen ( egg and also contain high concentration of malachite green to overcome contamination with other bacteria )  Middlebrooks 7H10 & 7H11 are (contain defined vitamins , salts , catalase , glycerol , oleic acid and albumin to neutralize toxic effect of fatty acids )  Liquid media such as Middle brook 7H9 broth  culture required ( 6-8 )weeks for weeks for isolation from media  Drug sensitivity to Anti-TB require additional 4 weeks 21
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  • 23. 23 Mantoux test : Dose : 1 TU of PPD in 0.1 ml intradermally Area : flexor surface of the left forearm , mid way between wrist & elbow Result : read after 48-96 hours but 72 hour is ideal Reaction : Erythema & Induration >10 mm = positive < 6 mm = negative Immunological diagnosis (Tuberculin test )
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  • 25. Two step testing  Use two – step testing for initial skin testing of adults who will be retested within 1-3 weeks - If first test (+) ,consider the person infected - If first test (-) , give second test 1-3 weeks later - If second test (+) , consider person infected - If second test (- ) , consider person uninfected 25
  • 26. 26 Newer diagnostic method  Radiometric BACTEC 460 TB method system  MGIT 960 Mycobacteria detection system  MB/ BACT System  Nucleic acid amplification test (NAAT)  Cartridge based nucleic acid amplification test (CB-NAAT)
  • 27. Radiometric BACTEC 460 TB method  Where in C labelled palmitic acid in 7H12 medium is used  Growth is ascertained by liberation of 14CO2 as metabolized by mycobacteria measure by BACTEC system instrument  Average time : 8 days  Can also be used for drug susceptibility testing  Drawbacks : - High cost - Disposal of radioactive waste 27
  • 28. MGIT( mycobacterial growth indicator tube) 960  Rapid method  Consist of round bottom tubes containing 4 ml of modified middlebrook 7H9 broth which has an oxygen sensitive fluorescent sensor at the bottom  When mycobacteria grow , they deplete the dissolved oxygen in the broth & allow the indicator to fluoresce brightly in a 365 nm UV light  Positive signal obtain in 10 – 12 days 28
  • 29. Advantages of MGIT  All type of specimens  Continuously monitored  Positive signals over 10 -12 days  Non-radiometric  Cheaper than BACTEC 29
  • 30. MB/ BacT system  Non radiometric continuous monitoring system  Based on calorimetric detection of CO2  Slightly longer time than BACTEC ( 14 days )  Prone to contamination 30
  • 31. Detection and identification of mycobacteria directly clinical sample  Genotyping methods - PCR ( polymerase chain reaction ) - LAMP ( loop mediated isothermal amplification ) - TMA ( transcription mediated amplification ) - Nucleic acid amplification ( NAA ) - Cartridge based nucleic acid amplification test ( CB- NAAT )  Phenotypic methods - FAST plaque TB method 31
  • 32. Nucleic acid amplification tests (NAAT)  Amplifying M. tuberculosis nucleic acid sequence using a nucleic acid probe  Sensitivity at least 80 % in most studies  Requires 10 bacilli / ml of given sample  Specificity 98 % to 99% 32
  • 33. Xpert MTB / RIF  Automated , cartridge – based nucleic acid amplification test ( CB- NAAT )  Detect DNA sequence specific for m. tuberculosis and rifampicin resistance  Results are obtain from unprocessed sputum sample in 90 min 33
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  • 36. Advantages – Xpert MTB /RIF  Simultaneously detect M.tuberculosis and rifampicin resistance in less than 2 hours  The sensitivity for detecting TB is similar to that of to liquid culture ( sensitivity 88 % ) ; the specificity is also high(99 %)  The superior performance of Xpert MTB / RIF in detecting TB over that of microscopy makes it a particular useful tool for case –finding among people living with HIV 36
  • 37. Disadvantages  A stable uninterrupted electrical supply is needed  The ambient operating temperature of the instrument cannot exceed 30degree Celsius , cartridge must be stored at less than 28 degree Celsius  The shelf – life of the cartridge must be monitored to prevent them from expiring before they are used  Security measure must be put in place to prevent the theft of the accompanying laptop or desktop computer 37
  • 38. LAMP ( loop mediated isothermal amplification )  It is a novel nucleic acid amplification method in which reagents react under isothermal conditions with high specificity , efficiency and rapidity  LAMP is used for detection of M.TB complex , M.avium , and M. intracellular directly from sputum specimen as well as for detection of culture isolate grown in a liquid medium (MGIT ) or on a solid medium (Ogawa’s medium ) 38
  • 39.  This method employs a DNA polymerase an a set of four specially designed primers that recognize a total of six distinct sequence on the target DNA  Species – specific primers were designed by targeting the gyrB gene  Simple procedure , starting with the mixing of all reagents in a single tube , followed by an isothermal reaction during which the reaction mixture is held at 63celsus  60 min incubation time 39
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