d




                                                                                                   Initial Steps toward a National Conservation Strategy
                                                                                                        for Crop Wild Relatives of the United States
                                                                                                                                                  Colin Khoury1,2, Stephanie Greene3, Nora Patricia Castañeda Alvarez1,4
                                1Decision   and Policy Analysis Program, International Center for Tropical Agriculture (CIAT), Cali, Colombia email: c.khoury@cgiar.org; 2C. T. de Wit Graduate School Production Ecology & Resource Conservation, Wageningen University, Wageningen, The Netherlands; 3USDA ARS, Prosser, WA, USA; 4Bioversity International, Regional Office for the Americas, Cali, Colombia




    Introduction                                                                                                                                       Prioritizing genepools based on potential use value                                                                                                    Next steps toward a national CWR conservation strategy
    The wild relatives of crops (CWR), as important genetic resources for crop                                                                         Given limited resources, a national conservation strategy for CWR requires the                                                                         We will utilize a “gap analysis” method aimed at identifying locations of genetic
    improvement, represent a dual challenge of requiring conservation as well as access                                                                prioritization of species based upon their potential use value, particularly in                                                                        diversity in the US un- or under- secured in conservation systems12, in order to
    for use. In many regions these resources are threatened by habitat modification,                                                                    contributing to agriculture through crop breeding. This necessarily limits the term                                                                    inform planning of germplasm collecting for ex situ conservation13, as well as to
    land use changes, and other factors, requiring their urgent collection and long-term                                                               ‘crop’ to those cultivated species with modern cultivar forms and active breeding                                                                      identify key areas in order to make recommendations for in situ conservation. We
    availability for research and breeding from ex situ genebank collections, as well as                                                               programs.                                                                                                                                              are gathering and geo-referencing species occurrence and conservation data from
    their adequate protection in situ in order to support an evolving genepool for the                                                                 We compiled a list of the world’s major crops from FAOSTAT global production                                                                           online resources, herbarium and genebank databases, and in collaboration with
    uses of the future. It is becoming increasingly feasible to formulate a large-scale                                                                and consumption data7; crops listed in Annex 1 of the International Treaty on Plant                                                                    researchers. The results of the gap analyses will form the basis for a prioritization
    plan for the efficient and effective conservation of CWR diversity due to                                                                           Genetic Resources for Food and Agriculture8; and the major and minor crops listed                                                                      of taxa across genepools for collecting, and the identification of the highest priority
    advancements in understanding the taxonomic relationships of CWR, in                                                                               in Appendix 2 of the World Atlas of Biodiversity9 and in Prescott-Allen and Prescott-                                                                  locations for the most efficient and effective collecting as well as for the
    distribution modelling through Geographic Information Systems tools, and in                                                                        Allen (1990)10. Crops on the collated list were then categorized by importance,                                                                        establishment of protected areas for CWR (Figure 1).
    conservation science and technologies. CWR resources are often globally                                                                            with the major crops given highest priority. The national inventory was then
    important, yet their management is dependent upon national policy and interests.                                                                                                                                                                                                                                                           Figure 1: wild Phaseolus and protected areas in the SW US
                                                                                                                                                       reviewed in order to identify CWR taxa of high potential use value that were not
    We suggest that an effective national approach toward the conservation of CWR                                                                      already included within the priority crop list, as well as for identification of taxa of
    entails the systematic coverage of this diversity in a network of genetic reserves,                                                                significant direct use value to food production or to the economy in the U.S. (e.g.
    with the range of genetic diversity found within these taxa safeguarded in                                                                         sugar maple (Acer saccharum), wild rice (Zizania spp.), and pecan (Carya illinoinensis).
    genebanks. We present the work to date on planning for a national effort to                                                                        These taxa were included in the prioritization as iconic valuable wild species
    conserve CWR and economically important wild taxa occurring in the United                                                                          occurring in the US. Finally, any additional genera known to be included within the
    States.                                                                                                                                            genepools of the crops on the priority lists were added (e.g. Aegilops for wheat,
                                                                                                                                                       Tripsacum for maize).
                                                                                                                                                       The resulting list of the world’s major crop genepools includes 255 crops/281
                                                                                                                                                       genera (108 crops/126 genera in Priority 1; 147 crops/155 genera in Priority 2).
                                                                                                                                                       This list includes all the most important agricultural crops around the world by a
                                                                                                                                                       number of measures, and covers all major crops listed in FAOSTAT for US
                                                                                                                                                       production and food supply7.


                                                                                                                                                       Priority taxa for a national CWR conservation strategy
                                                                                                                                                       2,012 taxa of 159 priority genera occur in the US- 904 taxa of 74 Priority 1 genera
                                                                                                                                                       (Table 1), and 1,108 taxa of 85 Priority 2 genera. Important crops with rich native
                                                                                                                                                       genepools include Allium (onion), Cucurbita (squash), Fragaria (strawberry),
             Cucurbita foetidissima                       Juglans hindsii                      Vitis rotundifolia
                                                                                                                                                       Helianthus (sunflower), Ipomoea (sweet potato), Lactuca (lettuce), Phaseolus (bean),
                                                                                                                                                       Prunus (cherry, almond, peach), Ribes (currant), Rubus (raspberry), Saccharum (sugar
                                                                                                                                                       cane), Vaccinium (blueberry, cranberry), and Vitis (grape).
    Development of a national inventory of CWR and useful species
                                                                                                                                                       To target conservation efforts for a national conservation strategy, we focused on
    We are compiling a national inventory of taxa representing CWR of the world’s
                                                                                                                                                       Priority 1 genepools. This focus includes the richest genepools of native diversity
    crops, and wild species directly used for food, fiber, forage, medicinal, and other                                                                 occurring in the US that have the potential to contribute to crop improvement, and
    purposes. With the aim of including as many species as possible with the potential                                                                 also attempts to cover the major wild species directly utilized for food or
    to contribute to crop improvement, we defined CWR following Maxted (2006)1,                                                                         medicine. The Priority 1 list is currently under review by crop breeders and                                                                           Collaborate with us!
                                                                                                                                                       genetic resources experts.  Table 1: Priority 1 Genera                                                                                                 The gap analysis method is dependent upon the quality of data utilized. Important
    broadened to include species within the tertiary genepool. The national inventory
                                                                                                                                                                                                                                                                                                              species occurrence data are not easily available online, and ecogeographic datasets
    was compiled from data sources including the Germplasm Resources Information                                                                               Acer               Carya              Elymus             Leymus             Prunus             Trifolium
                                                                                                                                                                                                                                                                                                              benefit significantly from expert review. We would therefore like to ask for your
    Network (GRIN) World Economic Plants Database2, based on Wiersema and Leon                                                                                 Aegilops
                                                                                                                                                               Agave
                                                                                                                                                                                  Cinnamomum
                                                                                                                                                                                  Cocos
                                                                                                                                                                                                     Ficus
                                                                                                                                                                                                     Foeniculum
                                                                                                                                                                                                                        Linum
                                                                                                                                                                                                                        Malus
                                                                                                                                                                                                                                           Psathyrostachys
                                                                                                                                                                                                                                           Pseudoroegneria
                                                                                                                                                                                                                                                              Tripsacum
                                                                                                                                                                                                                                                              Vaccinium                                       collaboration in sharing with the project occurrence and conservation data on the
    (1999)3; completed volumes of the Flora of North America4; McGuffin (2000)5 (for                                                                            Agropyron          Colocasia          Fragaria           Manihot            Psidium            Vanilla                                         priority genera. If you have expertise in the taxonomic and genetic relationships
                                                                                                                                                               Allium             Corylus            Gossypium          Medicago           Pyrus              Vernicia
    herbs and medicinal species); and the Native Seed Network Database6 (for                                                                                   Artocarpus         Cucumis            Helianthus         Olea               Ribes              Vicia
                                                                                                                                                                                                                                                                                                              within the genepools, or in the distribution and/or conservation status of taxa, we
    restoration species). Both native and non-native taxa were included. USDA                                                                                  Asparagus          Cucurbita          Hordeum            Papaver            Rubus              Vigna                                           would appreciate your inputs for validating the results of the taxonomic work and
    National Plant Germplasm System (NPGS) curators and crop experts then
                                                                                                                                                               Avena              Cynara             Ilex               Pennisetum         Saccharum          Vitis
                                                                                                                                                                                                                                                                                                              the gap analyses. Please contact us at c.khoury@cgiar.org.
                                                                                                                                                               Beta               Daucus             Illicium           Persea             Simmondsia         Zizania

    contributed revisions. The national inventory currently contains over 3,000 taxa.                                                                          Brassica
                                                                                                                                                               Capsicum
                                                                                                                                                                                  Dioscorea
                                                                                                                                                                                  Diospyros
                                                                                                                                                                                                     Ipomoea
                                                                                                                                                                                                     Juglans
                                                                                                                                                                                                                        Phaseolus
                                                                                                                                                                                                                        Pinus
                                                                                                                                                                                                                                           Solanum
                                                                                                                                                                                                                                           Sorghum
                                                                                                                                                                                                                                                                                                              References
                                                                                                                                                                                                                                                                                                                                                                                                   8FAO   (2002) International Treaty on Plant Genetic Resources for Food and
                                                                                                                                                               Carica             Diplotaxis         Lactuca            Piper              Syzygium                                                                                                                                                Agriculture. Food and Agriculture Organization of the United Nations, Rome,
                                                                                                                                                               Carthamus          Echinacea          Lathyrus           Pistacia           Thinopyrum                                                         1Maxted  N, Ford-Lloyd BV, Jury SL, Kell SP and Scholten MA (2006) Towards a         Italy.
                                                                                                                                                                                                                                                                                                              definition of a crop wild relative. Biodiversity and Conservation 15(8): 2673–2685.   9Groombridge    B and Jenkins MD (2002) World Atlas of Biodiversity. Prepared by
                                                                                                                                                       Within these genepools, we will prioritize taxa by degree of relatedness to the                                                                        2USDA ARS   National Genetic Resources Program, Germplasm Resources
                                                                                                                                                                                                                                                                                                              Information Network (GRIN). Available online at: http://www.ars-grin.gov/cgi-
                                                                                                                                                                                                                                                                                                                                                                                                   the UNEP World Conservation Monitoring Centre. University of California
                                                                                                                                                                                                                                                                                                                                                                                                   Press, Berkeley, California.

                                                                                                                                                       crop (i.e. genepool concepts1,11). Those closely related taxa (GP1 and GP2), and                                                                       bin/npgs/html/wep.pl.
                                                                                                                                                                                                                                                                                                              3Wiersema
                                                                                                                                                                                                                                                                                                                                                                                                   10Prescott-AllenR and Prescott-Allen C (1990) How Many Plants Feed the
                                                                                                                                                                                                                                                                                                                                                                                                   World?. Conservation Biology 4 (4): 365-374.
                                                                                                                                                                                                                                                                                                                        J and Leon B (1999) World Economic Plants: A Standard Reference.
                                                                                                                                                       other taxa known to be utilized in crop breeding, will be subjected to a full gap                                                                      Boca Raton (FL): CRC Press LLC.                                                      11Harlan JR and de Wet JMJ (1971) Toward a Rational Classification of
                                                                                                                                                                                                                                                                                                              4Flora of North America Association (2008) Flora of North America. Available         Cultivated Plants. Taxon 20 (4): 509.
                                                                                                                                                       analysis for identification of collecting priorities, and for in situ conservation                                                                      online at: http://fna.huh.harvard.edu/.                                              12Maxted    N, Dulloo E, Ford-Lloyd BV, Iriondo JM, and Jarvis A (2008) Gap
                                                                                                                                                                                                                                                                                                                                                                                                   analysis: a tool for complementary genetic conservation assessment. Diversity
                                                                                                                                                       considerations. For the distantly related taxa, a superficial gap analysis will identify                                                                5McGuffin  M and American Herbal Products Association (2000) Herbs of
                                                                                                                                                                                                                                                                                                              commerce. 2nd ed. [S.l.]: American Herbal Products Association.                      and Distributions 14 (6): 1018-1030.

                                                                                                                                                       taxa not conserved ex situ by at least a few populations, and prioritize these for                                                                     6NativeSeed Network (2010) Native Seed Network Database. Available online
                                                                                                                                                                                                                                                                                                              at: www.nativeseednetwork.org.
                                                                                                                                                                                                                                                                                                                                                                                                   13Ramírez-Villegas J, Khoury C, Jarvis A, Debouck DG and Guarino L (2010) A
                                                                                                                                                                                                                                                                                                                                                                                                   Gap Analysis Methodology for Collecting Crop Genepools: A Case Study with

                                                                                                                                                       additional collecting. Any taxa identified as rare or threatened will be given                                                                          7FAO  (2011) FAOSTAT Agricultural production domain. FAO, Rome, Italy.
                                                                                                                                                                                                                                                                                                                                                                                                   Phaseolus Beans. PLoS ONE 5(10), e13497.
                                                                                                                                                                                                                                                                                                              Available online at: http://faostat.fao.org/.                                        CWR photos from www.plantsystematics.org
                      Vaccinium oxycoccos                                               Rubus hawaiensis                                               particular attention in conservation recommendations.

CWR US poster Botany 2011

  • 1.
    d Initial Steps toward a National Conservation Strategy for Crop Wild Relatives of the United States Colin Khoury1,2, Stephanie Greene3, Nora Patricia Castañeda Alvarez1,4 1Decision and Policy Analysis Program, International Center for Tropical Agriculture (CIAT), Cali, Colombia email: c.khoury@cgiar.org; 2C. T. de Wit Graduate School Production Ecology & Resource Conservation, Wageningen University, Wageningen, The Netherlands; 3USDA ARS, Prosser, WA, USA; 4Bioversity International, Regional Office for the Americas, Cali, Colombia Introduction Prioritizing genepools based on potential use value Next steps toward a national CWR conservation strategy The wild relatives of crops (CWR), as important genetic resources for crop Given limited resources, a national conservation strategy for CWR requires the We will utilize a “gap analysis” method aimed at identifying locations of genetic improvement, represent a dual challenge of requiring conservation as well as access prioritization of species based upon their potential use value, particularly in diversity in the US un- or under- secured in conservation systems12, in order to for use. In many regions these resources are threatened by habitat modification, contributing to agriculture through crop breeding. This necessarily limits the term inform planning of germplasm collecting for ex situ conservation13, as well as to land use changes, and other factors, requiring their urgent collection and long-term ‘crop’ to those cultivated species with modern cultivar forms and active breeding identify key areas in order to make recommendations for in situ conservation. We availability for research and breeding from ex situ genebank collections, as well as programs. are gathering and geo-referencing species occurrence and conservation data from their adequate protection in situ in order to support an evolving genepool for the We compiled a list of the world’s major crops from FAOSTAT global production online resources, herbarium and genebank databases, and in collaboration with uses of the future. It is becoming increasingly feasible to formulate a large-scale and consumption data7; crops listed in Annex 1 of the International Treaty on Plant researchers. The results of the gap analyses will form the basis for a prioritization plan for the efficient and effective conservation of CWR diversity due to Genetic Resources for Food and Agriculture8; and the major and minor crops listed of taxa across genepools for collecting, and the identification of the highest priority advancements in understanding the taxonomic relationships of CWR, in in Appendix 2 of the World Atlas of Biodiversity9 and in Prescott-Allen and Prescott- locations for the most efficient and effective collecting as well as for the distribution modelling through Geographic Information Systems tools, and in Allen (1990)10. Crops on the collated list were then categorized by importance, establishment of protected areas for CWR (Figure 1). conservation science and technologies. CWR resources are often globally with the major crops given highest priority. The national inventory was then important, yet their management is dependent upon national policy and interests. Figure 1: wild Phaseolus and protected areas in the SW US reviewed in order to identify CWR taxa of high potential use value that were not We suggest that an effective national approach toward the conservation of CWR already included within the priority crop list, as well as for identification of taxa of entails the systematic coverage of this diversity in a network of genetic reserves, significant direct use value to food production or to the economy in the U.S. (e.g. with the range of genetic diversity found within these taxa safeguarded in sugar maple (Acer saccharum), wild rice (Zizania spp.), and pecan (Carya illinoinensis). genebanks. We present the work to date on planning for a national effort to These taxa were included in the prioritization as iconic valuable wild species conserve CWR and economically important wild taxa occurring in the United occurring in the US. Finally, any additional genera known to be included within the States. genepools of the crops on the priority lists were added (e.g. Aegilops for wheat, Tripsacum for maize). The resulting list of the world’s major crop genepools includes 255 crops/281 genera (108 crops/126 genera in Priority 1; 147 crops/155 genera in Priority 2). This list includes all the most important agricultural crops around the world by a number of measures, and covers all major crops listed in FAOSTAT for US production and food supply7. Priority taxa for a national CWR conservation strategy 2,012 taxa of 159 priority genera occur in the US- 904 taxa of 74 Priority 1 genera (Table 1), and 1,108 taxa of 85 Priority 2 genera. Important crops with rich native genepools include Allium (onion), Cucurbita (squash), Fragaria (strawberry), Cucurbita foetidissima Juglans hindsii Vitis rotundifolia Helianthus (sunflower), Ipomoea (sweet potato), Lactuca (lettuce), Phaseolus (bean), Prunus (cherry, almond, peach), Ribes (currant), Rubus (raspberry), Saccharum (sugar cane), Vaccinium (blueberry, cranberry), and Vitis (grape). Development of a national inventory of CWR and useful species To target conservation efforts for a national conservation strategy, we focused on We are compiling a national inventory of taxa representing CWR of the world’s Priority 1 genepools. This focus includes the richest genepools of native diversity crops, and wild species directly used for food, fiber, forage, medicinal, and other occurring in the US that have the potential to contribute to crop improvement, and purposes. With the aim of including as many species as possible with the potential also attempts to cover the major wild species directly utilized for food or to contribute to crop improvement, we defined CWR following Maxted (2006)1, medicine. The Priority 1 list is currently under review by crop breeders and Collaborate with us! genetic resources experts.  Table 1: Priority 1 Genera The gap analysis method is dependent upon the quality of data utilized. Important broadened to include species within the tertiary genepool. The national inventory species occurrence data are not easily available online, and ecogeographic datasets was compiled from data sources including the Germplasm Resources Information Acer Carya Elymus Leymus Prunus Trifolium benefit significantly from expert review. We would therefore like to ask for your Network (GRIN) World Economic Plants Database2, based on Wiersema and Leon Aegilops Agave Cinnamomum Cocos Ficus Foeniculum Linum Malus Psathyrostachys Pseudoroegneria Tripsacum Vaccinium collaboration in sharing with the project occurrence and conservation data on the (1999)3; completed volumes of the Flora of North America4; McGuffin (2000)5 (for Agropyron Colocasia Fragaria Manihot Psidium Vanilla priority genera. If you have expertise in the taxonomic and genetic relationships Allium Corylus Gossypium Medicago Pyrus Vernicia herbs and medicinal species); and the Native Seed Network Database6 (for Artocarpus Cucumis Helianthus Olea Ribes Vicia within the genepools, or in the distribution and/or conservation status of taxa, we restoration species). Both native and non-native taxa were included. USDA Asparagus Cucurbita Hordeum Papaver Rubus Vigna would appreciate your inputs for validating the results of the taxonomic work and National Plant Germplasm System (NPGS) curators and crop experts then Avena Cynara Ilex Pennisetum Saccharum Vitis the gap analyses. Please contact us at c.khoury@cgiar.org. Beta Daucus Illicium Persea Simmondsia Zizania contributed revisions. The national inventory currently contains over 3,000 taxa. Brassica Capsicum Dioscorea Diospyros Ipomoea Juglans Phaseolus Pinus Solanum Sorghum References 8FAO (2002) International Treaty on Plant Genetic Resources for Food and Carica Diplotaxis Lactuca Piper Syzygium Agriculture. Food and Agriculture Organization of the United Nations, Rome, Carthamus Echinacea Lathyrus Pistacia Thinopyrum 1Maxted N, Ford-Lloyd BV, Jury SL, Kell SP and Scholten MA (2006) Towards a Italy. definition of a crop wild relative. Biodiversity and Conservation 15(8): 2673–2685. 9Groombridge B and Jenkins MD (2002) World Atlas of Biodiversity. Prepared by Within these genepools, we will prioritize taxa by degree of relatedness to the 2USDA ARS National Genetic Resources Program, Germplasm Resources Information Network (GRIN). Available online at: http://www.ars-grin.gov/cgi- the UNEP World Conservation Monitoring Centre. University of California Press, Berkeley, California. crop (i.e. genepool concepts1,11). Those closely related taxa (GP1 and GP2), and bin/npgs/html/wep.pl. 3Wiersema 10Prescott-AllenR and Prescott-Allen C (1990) How Many Plants Feed the World?. Conservation Biology 4 (4): 365-374. J and Leon B (1999) World Economic Plants: A Standard Reference. other taxa known to be utilized in crop breeding, will be subjected to a full gap Boca Raton (FL): CRC Press LLC. 11Harlan JR and de Wet JMJ (1971) Toward a Rational Classification of 4Flora of North America Association (2008) Flora of North America. Available Cultivated Plants. Taxon 20 (4): 509. analysis for identification of collecting priorities, and for in situ conservation online at: http://fna.huh.harvard.edu/. 12Maxted N, Dulloo E, Ford-Lloyd BV, Iriondo JM, and Jarvis A (2008) Gap analysis: a tool for complementary genetic conservation assessment. Diversity considerations. For the distantly related taxa, a superficial gap analysis will identify 5McGuffin M and American Herbal Products Association (2000) Herbs of commerce. 2nd ed. [S.l.]: American Herbal Products Association. and Distributions 14 (6): 1018-1030. taxa not conserved ex situ by at least a few populations, and prioritize these for 6NativeSeed Network (2010) Native Seed Network Database. Available online at: www.nativeseednetwork.org. 13Ramírez-Villegas J, Khoury C, Jarvis A, Debouck DG and Guarino L (2010) A Gap Analysis Methodology for Collecting Crop Genepools: A Case Study with additional collecting. Any taxa identified as rare or threatened will be given 7FAO (2011) FAOSTAT Agricultural production domain. FAO, Rome, Italy. Phaseolus Beans. PLoS ONE 5(10), e13497. Available online at: http://faostat.fao.org/. CWR photos from www.plantsystematics.org Vaccinium oxycoccos Rubus hawaiensis particular attention in conservation recommendations.