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Catherine	
  Jayapandian
	
  
Case	
  Western	
  Reserve	
  University,	
  Ohio,	
  USA	
  
	
  
 
o  Background:	
  Electrophysiological	
  Data	
  
Management	
  
o  Challenges:	
  Big	
  Data,	
  Mul;center	
  studies	
  
o  Cloudwave	
  Framework:	
  Features,	
  Components	
  
o  Current	
  Results	
  
o  Future	
  Direc;ons	
  
o  What	
  is	
  Epilepsy?	
  
n  Most	
  common	
  neurological	
  disorder	
  affec;ng	
  60	
  
million	
  worldwide	
  
o  How	
  is	
  Epilepsy	
  detected?	
  
n  Mul;-­‐modal	
  Electrophysiological	
  evalua;ons	
  like	
  
EEG,	
  EKG,	
  BP,	
  O2	
  and	
  CO2,	
  Sleep	
  data,	
  video	
  
n  Electroencephalogram	
  (EEG)	
  is	
  the	
  gold	
  standard	
  
for	
  diagnosis	
  and	
  pre-­‐surgical	
  evalua;on	
  
o  Mul;-­‐center	
  Clinical	
  Study	
  for	
  Preven;on	
  and	
  
Iden;fica;on	
  of	
  Risks	
  in	
  SUDEP	
  Pa;ents	
  
	
  
o  Key	
  Components	
  
n  MEDCIS	
  	
  
Mul$modality	
  Epilepsy	
  Data	
  Capture	
  
and	
  Integra$on	
  System	
  
n  OPIC	
  
Online	
  Pa$ent	
  Informa$on	
  Capture	
  
n  EpiDEA	
  
Epilepsy	
  Data	
  Extrac$on	
  and	
  
Annota$on	
  
n  Cloudwave	
  
Electrophysiological	
  Signal	
  “Big	
  Data”	
  
on	
  the	
  Cloud	
  
o  Ontology-­‐driven	
  Web-­‐
based	
  Electrophysiological	
  
Epilepsy	
  Signal	
  Query,	
  
Visualiza;on	
  and	
  Analysis	
  
Framework	
  
o  Provides	
  High	
  
Performance	
  Cloud	
  
CompuBng	
  Infrastructure	
  
for	
  handling	
  
Electrophysiological	
  “Big	
  
Data”	
  
o  PaBents	
  Cohorts	
  are	
  selected	
  using	
  the	
  MEDCIS	
  Query	
  
Builder	
  
o  PaBent	
  ID	
  is	
  linked	
  to	
  Cloudwave	
  Signal	
  Viewer	
  
All	
  studies	
  and	
  the	
  related	
  seizure	
  events	
  for	
  the	
  
pa;ent	
  can	
  be	
  viewed	
  using	
  Cloudwave	
  interface	
  
o  SelecBon	
  of	
  PaBent	
  Study,	
  Montage,	
  Signal/
Channels	
  for	
  display	
  
o  Facilitate	
  creaBon	
  of	
  new	
  montages	
  
(referenBal	
  and	
  bipolar)	
  
o  SelecBon	
  of	
  Seizure	
  Events/AnnotaBons	
  
Mouse	
  zooming	
  to	
  ;me-­‐
range	
  of	
  interest	
  
Expor;ng	
  as	
  image	
  and	
  
prin;ng	
  
Visually	
  navigate	
  using	
  scroll	
  to	
  
select	
  ;me-­‐range	
  
o  SelecBon	
  of	
  Filters	
  –	
  SensiBvity,	
  HF	
  Filter	
  	
  and	
  Time	
  Constant	
  
o  Electrophysiological	
  “Big”	
  Signal	
  Data	
  Storage	
  on	
  
HDFS	
  by	
  collec$ng	
  similar	
  signals	
  for	
  correla$on	
  and	
  
quan$ta$ve	
  signal	
  analysis	
  using	
  MapReduce	
  
distributed	
  processing	
  
n  Cloudwave:	
  Distributed	
  Processing	
  of	
  “Big	
  Data”	
  from	
  
Electrophysiological	
  Recordings	
  for	
  Epilepsy	
  Clinical	
  Research	
  Using	
  
Hadoop,	
  AMIA	
  2013	
  (accepted)	
  
o  Computa;on	
  of	
  complex	
  Signal	
  Processing	
  algorithms	
  –	
  
Cardiac	
  Arrhythmia,	
  Respiratory	
  Arrhythmia	
  and	
  related	
  
measurements	
  for	
  real-­‐;me	
  rendering	
  on	
  Cloudwave	
  web	
  
interface	
  (work	
  in	
  progress)	
  
o  PRISM	
  is	
  NIH	
  funded,	
  mul--­‐disciplinary	
  and	
  mul--­‐
center	
   (4	
   par;cipa;ng	
   centers)	
   –	
   recrui;ng	
   1200	
  
pa;ents	
  	
  
o  Cloudwave	
   establishes	
   the	
   capability	
   for	
  
comprehensive	
  comparaBve	
  studies	
  of	
  SUDEP	
  and	
  
near-­‐SUDEP	
  cases	
  vs.	
  cohort	
  survivors	
  
o  Cloudwave	
  is	
  a	
  key	
  component	
  of	
  PRISM	
  project–	
  
facilitate	
  the	
  management	
  of	
  Electrophysiological	
  
“Big”	
   Data	
   and	
   Real	
   Time	
   Web	
   Rendering	
   of	
  
Mul-modal	
  signals	
  
o  For	
  more	
  details,	
  please	
  visit:	
  hap://prism.case.edu	
  
o  Contact:	
  Catherine	
  Jayapandian	
  (cpj3@case.edu)	
  

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Electrophysiological Signal Analysis and Visualization using Cloudwave for Epilepsy Clinical Research

  • 1. Catherine  Jayapandian   Case  Western  Reserve  University,  Ohio,  USA    
  • 2.   o  Background:  Electrophysiological  Data   Management   o  Challenges:  Big  Data,  Mul;center  studies   o  Cloudwave  Framework:  Features,  Components   o  Current  Results   o  Future  Direc;ons  
  • 3. o  What  is  Epilepsy?   n  Most  common  neurological  disorder  affec;ng  60   million  worldwide   o  How  is  Epilepsy  detected?   n  Mul;-­‐modal  Electrophysiological  evalua;ons  like   EEG,  EKG,  BP,  O2  and  CO2,  Sleep  data,  video   n  Electroencephalogram  (EEG)  is  the  gold  standard   for  diagnosis  and  pre-­‐surgical  evalua;on  
  • 4. o  Mul;-­‐center  Clinical  Study  for  Preven;on  and   Iden;fica;on  of  Risks  in  SUDEP  Pa;ents     o  Key  Components   n  MEDCIS     Mul$modality  Epilepsy  Data  Capture   and  Integra$on  System   n  OPIC   Online  Pa$ent  Informa$on  Capture   n  EpiDEA   Epilepsy  Data  Extrac$on  and   Annota$on   n  Cloudwave   Electrophysiological  Signal  “Big  Data”   on  the  Cloud  
  • 5. o  Ontology-­‐driven  Web-­‐ based  Electrophysiological   Epilepsy  Signal  Query,   Visualiza;on  and  Analysis   Framework   o  Provides  High   Performance  Cloud   CompuBng  Infrastructure   for  handling   Electrophysiological  “Big   Data”  
  • 6. o  PaBents  Cohorts  are  selected  using  the  MEDCIS  Query   Builder   o  PaBent  ID  is  linked  to  Cloudwave  Signal  Viewer   All  studies  and  the  related  seizure  events  for  the   pa;ent  can  be  viewed  using  Cloudwave  interface  
  • 7. o  SelecBon  of  PaBent  Study,  Montage,  Signal/ Channels  for  display   o  Facilitate  creaBon  of  new  montages   (referenBal  and  bipolar)  
  • 8. o  SelecBon  of  Seizure  Events/AnnotaBons   Mouse  zooming  to  ;me-­‐ range  of  interest   Expor;ng  as  image  and   prin;ng   Visually  navigate  using  scroll  to   select  ;me-­‐range  
  • 9. o  SelecBon  of  Filters  –  SensiBvity,  HF  Filter    and  Time  Constant  
  • 10. o  Electrophysiological  “Big”  Signal  Data  Storage  on   HDFS  by  collec$ng  similar  signals  for  correla$on  and   quan$ta$ve  signal  analysis  using  MapReduce   distributed  processing   n  Cloudwave:  Distributed  Processing  of  “Big  Data”  from   Electrophysiological  Recordings  for  Epilepsy  Clinical  Research  Using   Hadoop,  AMIA  2013  (accepted)   o  Computa;on  of  complex  Signal  Processing  algorithms  –   Cardiac  Arrhythmia,  Respiratory  Arrhythmia  and  related   measurements  for  real-­‐;me  rendering  on  Cloudwave  web   interface  (work  in  progress)  
  • 11. o  PRISM  is  NIH  funded,  mul--­‐disciplinary  and  mul--­‐ center   (4   par;cipa;ng   centers)   –   recrui;ng   1200   pa;ents     o  Cloudwave   establishes   the   capability   for   comprehensive  comparaBve  studies  of  SUDEP  and   near-­‐SUDEP  cases  vs.  cohort  survivors   o  Cloudwave  is  a  key  component  of  PRISM  project–   facilitate  the  management  of  Electrophysiological   “Big”   Data   and   Real   Time   Web   Rendering   of   Mul-modal  signals   o  For  more  details,  please  visit:  hap://prism.case.edu   o  Contact:  Catherine  Jayapandian  (cpj3@case.edu)