This literature review examines the deep-sea red tree coral, Primnoa pacifica. It discusses P. pacifica's role as a habitat-forming octocoral and focuses on its sexual reproduction, which includes both broadcast spawning and asexual budding. The review finds that P. pacifica populations in both deep-sea and shallow-water fjord habitats exhibit similar reproductive strategies and cycles, despite environmental differences. It also notes that P. pacifica is slow-growing and recruitment occurs decadally, making it vulnerable to fishing impacts. Further research is needed to better understand threats to P. pacifica from human activities.
KEY POINTS
Evolution is a slow and gradual STEP BY STEP process.
Irreversible transformations takes place from simple to complex or advanced occurring in time and space.
Darwin assumed that if evolution is gradual , then there should be a record in fossils of small incremental change within a species. But in many cases, Darwin, and scientists today, are unable to find most of these intermediate forms.
Mutation, genetic drift, gene flow, non-random mating, and natural selection are the 5 key mechanisms responsible for evolution.
Variation, inheritance, selection and time are the 4 principles that are considered as the components of the evolutionary mechanism of natural selection.
KEY POINTS
Evolution is a slow and gradual STEP BY STEP process.
Irreversible transformations takes place from simple to complex or advanced occurring in time and space.
Darwin assumed that if evolution is gradual , then there should be a record in fossils of small incremental change within a species. But in many cases, Darwin, and scientists today, are unable to find most of these intermediate forms.
Mutation, genetic drift, gene flow, non-random mating, and natural selection are the 5 key mechanisms responsible for evolution.
Variation, inheritance, selection and time are the 4 principles that are considered as the components of the evolutionary mechanism of natural selection.
Daily Hire of your own Non Executive Director, General Manager, Purchasing & Supply Chain Director, Logistics Controller, Executive Mentor & Coach, Speaker, Lecturer and Session Chairman
! 1!A Scientific Review of the Physiology of Pacific Salmotroutmanboris
! 1!
A Scientific Review of the Physiology of Pacific Salmon Migration
B. C. McKinney1
1 Department of Natural Sciences, University of South Carolina Beaufort, One University
Boulevard, Bluffton, South Carolina 29909, USA
Abstract For many generations, humans have altered practically every
ecosystem in the entire world. The footprint humans leave behind on ecosystems
on Earth has continuously matted the ecosystems and critical habitat in which all
species on Earth depend on for survival. When considering Pacific and Atlantic
salmon populations, the array of human caused stressors is responsible for the
population depletions across the United States and Canada. This review will
coordinate the impacts of river impoundments (i.e., hydropower systems) on
upstream and downstream migration as well as visit the impacts of natural and
human caused change on the quality of habitat in which salmonids inhabit through
all life stages.
Introduction
A variety of teleost species are classified within the Family Salmonidae under the Order
Salmoniformes. Salmonidae is comprised of a variety of trouts (Salmo spp.), chars (Salvelinus
spp.), graylings (Thymallus spp.), taimen (Parahucho spp.), and salmons (Salmo &
Oncorhynchus spp.). The anatomy of this family is similar to other ray-finned fish having
dorsal, pelvic, pectoral, anal, and dorsal fins, however they possess an additional fin posterior to
the dorsal called the adipose fin.
Salmonid lifecycles are very complex and have been a topic of research for many
generations (Briggs, 1953; Holmes & Stainer 1966; Vronskiy, 1972; Thompson & Sargent, 1977;
Healy, 1980; McCormick &Saunders, 1987; Murray & Rosenau, 1989; Nehlson et al., 1991). In
recent findings, the introduction of telemetry techniques and field sampling routines have given
! 2!
researchers insight about the duration, timing, and patterns of homing and staying (Healy, 1980;
Giorgi et al., 1997; Walker et al., 2016). Through the protection of the Endangered Species Act
(ESA) select Pacific salmon populations have been granted protection by federal regulations in
relation to the habitat that is essential to their survival (USNMFS 1995). In this review, relevant
available published literature will be compiled to discuss a variety of explanations towards the
physiology and morphological complexities associated with Pacific salmon.!
Overview of Salmon Biology
In this section, emphasis will focus on the evolutionary history of Salmon (see Groot &
Margolis, 1991, Hendry et al., 2000, and Waples et al., 2007 for more details). North America’s
populations of Pacific Salmon consist of five distinct species: chinook salmon (Onchorhynchus
tshawytscha), pink salmon (O. gorbusha), chum salmon (O. keta), coho salmon (O. kisutch), and
sockeye salmon (O. nerka). Pacific salmon are uniquely characterized as anadromous
(migratory) and semelaparous (i.e., die after spawning) spe ...
Running head EVOLUTION IN THE GALAPAGOS ISLANDS1EVOLUTION I.docxcowinhelen
Running head: EVOLUTION IN THE GALAPAGOS ISLANDS
1
EVOLUTION IN THE GALAPAGOS ISLANDS
5
Evolution In The Galapagos Islands
Melissa Vaccaro
D’Youville College
Galapagos Islands are situated in Southern America, in the Pacific Ocean, 1046.07 kilometers from the coast of Ecuador. The Galapagos Islands are cut off from all other groups of islands or land form. There are four different reasons as to why the Galapagos Islands are very important. First, the Galapagos Islands are very isolated; they are home for dozens of animal and plant species that can never be found in any other part of the world (Larson, 2001). For instance, the largest reptile in the world, which has a longer lifespan than all animals in the world is the Galapagos Tortoise found in the Galapagos Islands.
According to Larson (2001) the second, history of the development natural selection started in Galapagos Islands in 1835 on the HMS Beagle when Darwin visited Galapagos for five weeks. Initially, Charles had a belief that every species was created by God. Nevertheless, he reasoned accurately after seeing and studying differences among same species from different islands, that a natural process made more sense. Nonetheless, he ultimately came up with a new ideas and questions that needed many answers by thinking that almost all species emerged through a natural procedure via a natural selection. Currently, Darwin’s Finches is still being used as an example in different fields of science (Larson, 2001).
Third reason Galapagos Islands are very important is that the Galapagos Islands are volcanic just like Islands of Hawaii. Deep in the earth’s crust, below the pacific tectonic, where the magma flows to the surface, there is a geological hotspot that does not move. Nonetheless, new volcanic islands start to emerge beneath the sea up to when they are finally poke at the top of the surface to develop a new Galapagos islands as the Pacific plate shifts from west to east (Larson, 2001). The westernmost island is the island of Fernandina, is the youngest of the islands. Geologically, it is approximated to be more than 750,100 years old. The first islands to be formed off to the east are approximated to be more than 2.5 million years old.
Walsh & Mena (2013) assert that the last reason, which makes the Galapagos Islands to be more significant is that its climate is affected by two major ocean currents. To start with, the Humboldt Current from Antarctica which comes from the south and the second; from the western side comes a deep-water current. This cold deep water winds comes with a huge distribution of minerals and nutrients, which feed the bottom of the food chain upon reaching the islands. This is therefore, the reason as to why the western waters of the Galapagos are different from those of other marine life.
According to Walsh & Mena (2013), all people who visit the Galapagos Islands cannot but help wonder how different creatures came into existence, and they ...
1. Caitlin Grant
11/29/15
IndependentStudy
Literature Review on the Red Tree Coral, Primnoa pacifica
The deep-sea is home to a diverse community of unique organisms that hold
many elusive answers to our questions about the evolution of the wide expanse of
marine biodiversity present in a habitat that proves difficult to explore and study.
Described as an environment with limited light, nutrient availability and unique
topography, inhabiting species have had to adapt and specialize to reproduce and
survive in these ecosystems(Watling et al., 2011).
Among the marine taxa present, octocorals have been highlighted in recent years
as a species of interest, (Waller et al., 2014; Roberts et al., 2006) in part to its particular
vulnerability to fishing disturbances, and more prevalent as of late, the impact of
warming temperatures and changes in seawater chemistry may have on these corals
(Roberts et al., 2006). Much of the wealth of knowledge already explored in octocorals
is scattered, with gaps in many areas of octocoral reproduction, ecology and
distribution.
In the 1800s, cold-water corals were discovered and found to be incredibly
abundant, found in all ocean basins around the world at considerable depths (Watling et
al., 2011). There are two major subclasses of cold-water corals: Hexacorallia, the hard
corals, and Octocorallia, the soft corals. This review focuses on the subclass
Octocorallia, which represents the most diverse group of corals, with 75% of the 3000
species known found in waters deeper than 50 m (Cairns, 2007a).
Octocorals are characterized by the subdivision of polyps by eight mesenteries
consisting of tentacles containing lateral pinnules and tissues embedded with hardened
sclerites (Watling et al., 2011). Within this subclass, 4 orders divide into Helioporacea,
Alcyonacea, Gorgonacea, and Pennatulacea.
In the interest of this review, I have focused on species contained within the
order Alyconacea. Order Alyconacea is further broken down into 6 suborders, one of
which is the suborder Calcaxonia that embodies 5 families, 98 genera, all mostly
distributed in deep waters, comprised of species with a solid axial skeleton, containing
large amounts of non-scleritic calcareous material (Watling et al., 2011). Out of the 3
largest families within the suborder: Primnoidae, Chrysogorgiidae, and Isididae,
Primnoidae has been identified as particularly abundant and diverse in deep waters,
and are present in shallow water habitats as well (McFadden et al., 2006). Cairns &
Bayer (2009) found cladistic evidence supporting the origination of Primnoidae in the
Antarctic, where they are most abundant but found also in the North Pacific, North
Atlantic and subantarctic South Pacific regions (Waller et al., 2014).
Called the “quintessential deep-water octocoral family” (Cairns & Bayer, 2009),
Primnoidae is most common at bathyal-slope depths, with a vertical distribution of 8-
5850 m (Watling et al., 2011). There are 233 valid species within the Primnoidae family,
2. making it the 4th largest octocorallian family, recognizable by the armor of scale-like
sclerites covering their polyps (Watling et al., 2011).
Primnoidae’s ability to form large, branching thickets provide a suitable habitat for
other invertebrate species, including polychaete worms, copepods, amphipods, and
brittle stars (Coleman & Bernard, 1991). One such invertebrate, the polynoid worm
Gorgoniapolynoe caeciliae has been observed to settle on colonies of the primnoid,
Candidella imbricata. When the worm becomes 25 segments long, it creates “arbor-like”
tunnels along the basal polyp sclerites, inducing changes in the corals morphology to
support its growth (Ecklebarger et al., 2005). Due to these commensals utilizing these
octocorals, any damage inflicted on these corals from fishing gear would also be
causing habitat destruction to the invertebrates living within them.
In regards to food habits of deep-water and shallow-water corals, there are
differences and crossovers in their preferences. Shallow-water gorgonians consume
items such as phytoplankton, picoplankton, autotrophic nanoplankton, invertebrate eggs
and detrital particulate organic matter (POM) (Orejas et al., 2003) and is likely that along
with diatoms and dinoflagellates, deep-water species such as Primnoisis antarctica and
the primnoid, Primnoella feed on these materials as well (Sherwood et al., 2008).
The red tree coral, Primnoa pacifica, has become a focal species in reproductive
studies, due in part to its important role as a habitat forming octocoral and its distribution
along shelf and upper slope areas, making it particularly vulnerable to fishing gear
(Waller et al., 2014). In an effort to understand the extent of P. pacifica’s ability to
recover from damage, it would be useful to conduct further studies on reproductive
strategies, biogeographic patterns, and population connectivity (Watling et al., 2011).
Primnoa pacfica is a long-lived, slow growing octocoral, and these disturbances have
been seen to cause detrimental effects to their reproductive fitness, via planulae
expulsion and resource allocation, reducing fecundity and possibly wiping out
populations that would take years to return (Waller et al., 2014).
Preserving colonies of P. pacifica in the Gulf of Alaska, where a shallow-water
population was recently discovered, is of particular interest to fishery managers due to
the keystone refuge habitats P. pacifica provides for 12 species of rockfish (Sebastes
sp.) (Waller et al., 2014). This shallow-water occurrence of normally deep-water P.
pacifica is explained by Waller et al. (2014) as deep-water environments are being
mimicked in shallow-water, high altitude fjords, a phenomenon termed “deep-water
emergence.” Other coral species have been seen to adapt to different environments as
well. Species of shallow-water Stylasteridae corals have been found to originate in the
deep-sea. Although not well studied, Lindner et al. (2008) hypothesizes that in contrast
to the stable deep-sea abyss, there are opportunities for the evolution and
diversification of these corals to migrate into shallow, highly dynamic upper bathyal
environments. Key deep-water characteristics provide evidence that supports deep-
water corals in shallow-water fjord areas by both supporting nutrient-rich upwelling, low
temperatures like bathyal depths, strong currents and low light levels (Waller et al.,
2014).
Both the deep-water populations in the North Pacific and the shallow-water Tracy
Arm habitats reside on shelf and upper slope areas, where limited energetic inputs and
potential masked temporal and seasonal signals restrict energy available to octocorals
to invest in reproduction (Watling et al., 2011). This restriction also affects external cues
3. necessary for gametogenetic development and spawning synchrony in populations of
octocorals (Gage & Tyler, 1991; Young, 2003).
Most octocorals are gonochoristic, and both deep-sea corals and their shallow-
water counterparts share common strategies of sexual reproduction (Watling et al.,
2011). In P. pacifica, sexual reproduction occurs within the autozoids, as well as
asexual reproduction via extratentacular budding along the central axis (Waller et al.,
2014). There are two types of sexual reproduction that occur in octocorals: broadcast
spawing, where fertilization and development occur in the water column, and brooding;
where fertilization occurs within the maternal colony (Watling et al., 2011). Given the
limitations in deep-sea octocorals’ energy stores for reproduction, internal fertilization
and brooding would be predicted to be favored, however, deep-sea species of sea pens
have been found to be exclusively broadcast spawners (Ecklebarger et al., 1998).
Kahng et al. (2011) reported that internal brooding is a mode conserved among
Primnoidae octocorals, but Waller et al. (2014) discredited this and confirmed that P.
pacifica exhibits broadcast spawning instead. Alternately, soft corals in the Order
Alyconacea, sometimes within the same genus, will exhibit both forms of sexual
reproduction, showing a greater degree of reproductive flexibility (McFadden et al.,
2001).
In deep-sea corals, several stages of developing oocytes or spermatocysts are
commonly present in a single polyp, supporting a highly asynchronous method during
gametogenesis (Rice et al., 1992). This feature was also observed by Waller et al.
(2014) in P. pacifica, as well as a pattern among shallow-water species, suggesting a
possible common phylogenetic feature of continuous gametogenesis in octocorals
(Watling et al., 2011). Primnoa pacifica also shows seasonality trends in reproductive
processes, Waller et al., (2015) collected samples from Eastern Pacific P. pacifica
showing all four stages of spermatocytes present at one time.
Waller et al., (2014) found that the fecundity of vitellogenic oocytes seemed to be
on more than a yearly cycle, as well as sperm maturation appearing to take just over a
year to complete. These octocorals may extend the process of gametogenesis and
oogenesis in an effort to synthesize larger, yolkier eggs (Orejas et al., 2007; Waller et
al., 2014). This is also possibly to compensate for limited temporal cues, such as
photoperiod, temperature and productivity peaks that effect synchronizing spawning
activity (Watling et al., 2011). Waller et al. (2014) also noted that during
spermatogenesis, corals may only be able to produce germ cells on yearly cycles and
may only be able to mature oocytes sporadically when suitable conditions are present.
The availability of food and lipid synthesis both affect these reproductive cycles (Waller
et al. 2014) and need to be taken into consideration on top of possible anthropogenic
activities harmful to the species. Due to the pulses at which plankton become available
to these corals, this food availability cannot be relied on to fuel year round reproduction,
based on the vertically distributed habitat (Waller et al. 2014).
The deep-water and the shallow-water populations of the red tree coral, P.
pacifica, show many similarities in terms of reproduction, ecology, and environments.
Given that this species is slow growing, with recruitment events seen to be on a decadal
scale (Waller et al., 2014), this species is particularly vulnerable to fishing pressures,
especially the larger, more reproductive colonies. Primnoa pacifica is also known as an
ecosystem engineer that will change the local environment, providing a microhabitat for
4. colonization of associated species (Waller et al., 2014). Further research should be
conducted in an effort to continue finding relationships between the two different
habitats where P. pacifica flourishes to better understand how human interactions may
negatively affect this species.
Works Cited
Cairns, S. D. (2007a). Studies on western Atlantic Octocorallia (Coelenterata:
Anthozoa). Part 8: New records of Primnoidae from the New England and Corner
Rise sea- mounts. Proceedings of the Biological Society of Washington. 120, 243-
263.
5. Coleman, C. O. and Barnard, J. L. (1991). Amatiguakius forsberghi, a new genus and
species from Alaska (marine Amphipoda: Epimeriidae). Proceedings of the
Biological Society of Washington. 104, 279-287.
Eckelbarger, K. J., Tyler, P. A. and Langton, R. W. (1998). Gonadal morphology and
gametogenesis in the sea pen Pennatula aculeata (Anthozoa: Pennatulacea) from
the Gulf of Maine. Marine Biology. 132, 677-690.
Eckelbarger, K. J., Watling, L. and Fournier, H. (2005). Reproductive biology of the
deep-sea polychaete Gorgoniapolynoe caeciliae (Polynoidae), a commensal species
associated with octocorals. Journal of the Marine Biological Association of the
United Kingdom. 85, 1425-1433.
Gage, J. D. and Tyler, P. A. (1991). Deep-Sea Biology: A Natural History of Organisms
at the Deep-Sea Floor, Cambridge University Press, Cambridge.
McFadden, C. S., France, S. C., Sanchez, J. A. and Alderslade, P. (2006). A molecular
phylogenetic analysis of the Octocorallia (Cnidaria: Anthozoa) based on
mitochondrial protein-coding sequences. Molecular Phylogenetics and Evolution. 41,
513-527.
Orejas, C., Gili, J. M. and Arntz, W. E. (2003). Role of small-plankton communities in
the diet of two Antarctic octocorals (Primnoisis antarctica and Primnoella sp.).
Marine Ecology Progress Series. 250, 105-116.
Rice, A. L., Tyler, P. A. and Paterson, G. J. L. (1992). The pennatulid Kophobelemnon
stelliferum (Cnidaria: Octocorallia) in the Porcupine Seabight (North-east Atlantic
Ocean). Journal Marine Biological Association of United Kingdom. 72, 417-434.
Roberts, J. M., Wheeler, A. J., Freiwald, A. (2006). Reefs of the Deep: The biology and
geography of cold-water coral ecosystems. Science. 312, 543-547.
Sherwood, O., Jamieson, R. E., Edinger, E. N. and Wareham, V. E. (2008). Stable C
and N isotopic composition of cold-water corals from the Newfoundland and
Labrador continental slope: Examination of trophic, depth and spatial effects. Deep-
Sea Research. I 55, 1392-1402.
Waller, R. G., Stone, R. P., Johnstone, J., Mondragon, J. (2014) Sexual Reproduction
and Seasonality of the Alaskan Red Tree Coral, Primnoa pacifica. PLoS ONE 9,1-
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Waller, R. G., Feehan, K. A. (2015). Notes on reproduction of eight species of Eastern
Pacific cold-water octocorals. Jour. of Mar. Biol. Assoc. of Uni. King. 95, 691-696.
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Biology. 60, 41-122.
Young, C. M. (2003). Reproduction, development and life-history traits. In Ecosystems
of the Deep Oceans (P. A. Tyler, ed), pp. 381-426. Ecosystems of the world. Vol. 28.
Elsevier, Amsterdam.