The document summarizes research aimed at developing a targeted co-delivery system for methotrexate (MTX) and a p53-derived peptide (p53i) using human serum albumin (HSA). The researchers synthesized fatty acid-conjugated versions of MTX and p53i to allow incorporation into HSA. They also generated recombinant HSA fusion proteins containing p53i or a control peptide. In vitro studies showed the fusion proteins increased p53 expression and promoted apoptosis. Co-delivery of fatty acid-conjugated MTX with the fusion proteins may enhance cytotoxicity compared to single agents and provide a new targeted drug delivery platform.
1) The document describes a method to co-deliver methotrexate (MTX) and a p53-derived peptide (p53i) using human serum albumin (HSA) as a carrier. MTX and a fatty acid-modified p53i peptide (FA-p53i) are incorporated into HSA to target delivery to cancer cells.
2) Experiments show the FA-p53i forms a stable complex with HSA and recombinant HSA fusion proteins promote cytotoxicity in cancer cells by inducing apoptosis and caspase activation. The fusion proteins also increase p53 expression while binding MDM2.
3) The HSA-based co-delivery system could enhance the therapeutic effect of M
1. A novel mutated chimeric tissue plasminogen activator (mt-PA) was developed by removing the first three domains of t-PA, inserting a GHRP sequence, and mutating it to resist plasminogen activator inhibitor-1 (PAI-1). 2. Mt-PA was expressed in Expi293F cells at a level of 5000 IU/mL and purified. 3. Pharmacokinetic studies in rats found mt-PA to have an elimination half-life of 19.1-26.1 minutes, plasma clearance of 3.8-5.9 mL/min, and mean residence time of 23.3-31.8 minutes - all significantly longer than wild-type
This study identified protein arginine methyltransferase 6 (PRMT6) as a coactivator of nuclear factor-kappa B (NF-κB) through three main findings:
1. Transgenic mice overexpressing a fusion of PRMT6 and the estrogen receptor displayed increased levels of interleukin 6 (IL-6), an NF-κB target gene, upon tamoxifen treatment.
2. PRMT6 was found to directly interact with the NF-κB subunit RelA and enhance the transcriptional activity of an NF-κB reporter.
3. PRMT6 was recruited by RelA to selective NF-κB target promoters upon TNF-α stimulation and its overexpression led to increased nuclear accumulation of Rel
DCPT and its metabolites DCTA, MAA, and DPI were evaluated for their effects on cell viability and ATP content in HepG2 cells. DCTA was found to be the most toxic, causing over 50% decreases in both cell viability and ATP levels at a concentration of 200 uM. DCPT and DPI showed more modest toxicity, with decreases of 16.5-28% and 10-21.5% respectively. MAA only affected ATP levels, with a 16.9% decrease. The combination of MAA and DPI showed no toxic effects. These results suggest that metabolism of DCPT into DCTA may play a key role in the toxicity observed in vitro and in vivo.
Proteolysis-targeting chimeras as tools in drug development (i)creativebiolabs11
PROTACs are heterobifunctional molecules that induce the degradation of target proteins by hijacking the ubiquitin-proteasome system. They work by simultaneously binding an E3 ubiquitin ligase and the protein of interest, linking them to promote ubiquitination and degradation of the target protein. The first PROTACs used peptides to recruit E3 ligases like VHL and SCFβ-TrCP and degrade proteins like FKBP12, ERα, and AR. However, peptide PROTACs had issues with cell permeability and stability. Improved VHL-based PROTACs used hydroxyproline peptides like ALAPYIP as degrons and added arginine residues to enhance cell permeability and degrade
The CCK-8 cell viability assay showed that wortmannin has a dose-dependent cytotoxic effect on DU-145 prostate cancer cells, with an IC50 of approximately 100 nM. Flow cytometry analysis of cells treated with 100 nM wortmannin found a decrease in single activation of the PI3K pathway, an increase in dual PI3K/MAPK pathway activation, and a small increase in MAPK pathway activation. Phase contrast images suggest the cells underwent apoptosis rather than lysis in response to wortmannin, as there was little cell debris present. These results indicate wortmannin affects signaling cross-talk in DU-145 cells and may increase apoptosis through impacts on the MAPK and dual PI3
This document discusses drug transporters and their clinical importance, with a focus on P-glycoprotein. It describes two main types of drug transporters: ATP-binding cassette (ABC) transporters and solute carrier (SLC) transporters. P-glycoprotein is an ABC transporter that transports various molecules across cell membranes in locations like the liver, kidney, placenta, and brain. It plays an important role in reducing drug absorption and access to target organs and tissues. Overexpression of P-glycoprotein can limit the effectiveness of treatments for cancer, HIV/AIDS, Alzheimer's, and epilepsy by pumping drugs back out of cells.
This study investigated the functional redundancy of the four aspartic proteinases (plasmepsins) found in the digestive vacuole of the malaria parasite Plasmodium falciparum. The researchers disrupted each of the plasmepsin genes (PfPM1, PfPM2, PfPM4, and PfHAP) through genetic engineering. They found that while disruption of PfPM1 and PfPM4 resulted in reduced parasite growth, none of the plasmepsins were essential for survival. This suggests the plasmepsins can compensate for each other, likely due to their structural and catalytic similarities. The study implies that effective antimalarial drugs will need to inhibit multiple plasmepsin family members.
1) The document describes a method to co-deliver methotrexate (MTX) and a p53-derived peptide (p53i) using human serum albumin (HSA) as a carrier. MTX and a fatty acid-modified p53i peptide (FA-p53i) are incorporated into HSA to target delivery to cancer cells.
2) Experiments show the FA-p53i forms a stable complex with HSA and recombinant HSA fusion proteins promote cytotoxicity in cancer cells by inducing apoptosis and caspase activation. The fusion proteins also increase p53 expression while binding MDM2.
3) The HSA-based co-delivery system could enhance the therapeutic effect of M
1. A novel mutated chimeric tissue plasminogen activator (mt-PA) was developed by removing the first three domains of t-PA, inserting a GHRP sequence, and mutating it to resist plasminogen activator inhibitor-1 (PAI-1). 2. Mt-PA was expressed in Expi293F cells at a level of 5000 IU/mL and purified. 3. Pharmacokinetic studies in rats found mt-PA to have an elimination half-life of 19.1-26.1 minutes, plasma clearance of 3.8-5.9 mL/min, and mean residence time of 23.3-31.8 minutes - all significantly longer than wild-type
This study identified protein arginine methyltransferase 6 (PRMT6) as a coactivator of nuclear factor-kappa B (NF-κB) through three main findings:
1. Transgenic mice overexpressing a fusion of PRMT6 and the estrogen receptor displayed increased levels of interleukin 6 (IL-6), an NF-κB target gene, upon tamoxifen treatment.
2. PRMT6 was found to directly interact with the NF-κB subunit RelA and enhance the transcriptional activity of an NF-κB reporter.
3. PRMT6 was recruited by RelA to selective NF-κB target promoters upon TNF-α stimulation and its overexpression led to increased nuclear accumulation of Rel
DCPT and its metabolites DCTA, MAA, and DPI were evaluated for their effects on cell viability and ATP content in HepG2 cells. DCTA was found to be the most toxic, causing over 50% decreases in both cell viability and ATP levels at a concentration of 200 uM. DCPT and DPI showed more modest toxicity, with decreases of 16.5-28% and 10-21.5% respectively. MAA only affected ATP levels, with a 16.9% decrease. The combination of MAA and DPI showed no toxic effects. These results suggest that metabolism of DCPT into DCTA may play a key role in the toxicity observed in vitro and in vivo.
Proteolysis-targeting chimeras as tools in drug development (i)creativebiolabs11
PROTACs are heterobifunctional molecules that induce the degradation of target proteins by hijacking the ubiquitin-proteasome system. They work by simultaneously binding an E3 ubiquitin ligase and the protein of interest, linking them to promote ubiquitination and degradation of the target protein. The first PROTACs used peptides to recruit E3 ligases like VHL and SCFβ-TrCP and degrade proteins like FKBP12, ERα, and AR. However, peptide PROTACs had issues with cell permeability and stability. Improved VHL-based PROTACs used hydroxyproline peptides like ALAPYIP as degrons and added arginine residues to enhance cell permeability and degrade
The CCK-8 cell viability assay showed that wortmannin has a dose-dependent cytotoxic effect on DU-145 prostate cancer cells, with an IC50 of approximately 100 nM. Flow cytometry analysis of cells treated with 100 nM wortmannin found a decrease in single activation of the PI3K pathway, an increase in dual PI3K/MAPK pathway activation, and a small increase in MAPK pathway activation. Phase contrast images suggest the cells underwent apoptosis rather than lysis in response to wortmannin, as there was little cell debris present. These results indicate wortmannin affects signaling cross-talk in DU-145 cells and may increase apoptosis through impacts on the MAPK and dual PI3
This document discusses drug transporters and their clinical importance, with a focus on P-glycoprotein. It describes two main types of drug transporters: ATP-binding cassette (ABC) transporters and solute carrier (SLC) transporters. P-glycoprotein is an ABC transporter that transports various molecules across cell membranes in locations like the liver, kidney, placenta, and brain. It plays an important role in reducing drug absorption and access to target organs and tissues. Overexpression of P-glycoprotein can limit the effectiveness of treatments for cancer, HIV/AIDS, Alzheimer's, and epilepsy by pumping drugs back out of cells.
This study investigated the functional redundancy of the four aspartic proteinases (plasmepsins) found in the digestive vacuole of the malaria parasite Plasmodium falciparum. The researchers disrupted each of the plasmepsin genes (PfPM1, PfPM2, PfPM4, and PfHAP) through genetic engineering. They found that while disruption of PfPM1 and PfPM4 resulted in reduced parasite growth, none of the plasmepsins were essential for survival. This suggests the plasmepsins can compensate for each other, likely due to their structural and catalytic similarities. The study implies that effective antimalarial drugs will need to inhibit multiple plasmepsin family members.
This document summarizes efforts to identify novel small molecule inhibitors of choline kinase (ChoK) through a structure-based fragment drug discovery approach. ChoK plays a key role in cancer cell proliferation and is a promising drug target. NMR screening of 1152 fragments identified 55 initial hits binding to ChoK. Further biophysical validation and structural optimization led to novel symmetrical and nonsymmetrical ChoK inhibitors with nanomolar binding affinities. These inhibitors reduced levels of phosphocholine and induced apoptosis in breast cancer cell lines but not control cells, validating ChoK as a drug target.
This document summarizes the development of optimized aptamer-siRNA chimeras for targeting prostate cancer cells expressing prostate-specific membrane antigen (PSMA). The researchers:
1) Truncated the aptamer portion of an earlier chimera to facilitate chemical synthesis while retaining binding to PSMA-expressing cells.
2) Introduced modifications to the siRNA portion like overhangs and strand swapping to enhance processing by Dicer and loading of the guide strand into RISC, increasing gene silencing effects.
3) Showed that the optimized second-generation chimeras achieved over 50 times greater silencing than the original chimera in vitro and induced tumor regression in mice after systemic administration, representing
The document summarizes research into how a furanone compound from marine origins can reduce lipid accumulation in cells in vitro by targeting the LXRα and PPARα nuclear receptors. The study used techniques like fluorescent immunocytochemistry, Western blotting, qPCR, and cell viability assays to examine the compound's effects on receptor expression and activity, as well as lipid levels. Results demonstrated that the furanone enhanced proteins involved in cholesterol efflux like ABCA1 and ABCG1 while increasing LXRα and PPARα expression. This suggests it lowers lipids by influencing multiple metabolic pathways regulated by these receptors. The conclusions discuss the compound's potential natural therapeutic application for hyperlipidemia by modulating the important
This document summarizes recent efforts to design small molecule epigenetic modulators that target histone acetyltransferases (HATs), histone deacetylases (HDACs), and histone methyltransferases. It describes the roles of HATs, HDACs, and histone methyltransferases in controlling gene expression through histone and DNA modifications. A handful of HAT inhibitors have been identified, including bisubstrate analogs, natural products, and synthetic small molecules. Inhibitors of HDACs and DNA methyltransferases are more established as epigenetic modulators in cancer treatment. The development of small molecule inhibitors targeting the various writers, erasers, and readers of epigenetic marks offers promise
This study investigated how changes in lipid nanoparticle (LNP) formulation impact mRNA delivery and endocytosis. The researchers found that an optimized LNP formulation for mRNA delivery showed decreased efficacy in NPC1-deficient cells, whereas the original LNP formulation used for siRNA delivery showed increased efficacy. Inhibiting cholesterol trafficking also only decreased efficacy for the optimized LNPs, suggesting it relies on this pathway. Modifying the optimized LNP formulation step-wise to match the original formulation reversed these trends, implicating changes in PEG percentage and phospholipid composition as causes for the observed efficacy differences between formulations. The results suggest LNP formulation influences subcellular trafficking and endocytosis pathways utilized for nucleic acid delivery.
Polymorphism affecting drug metabolism .heenakazi4
This document discusses genetic polymorphisms that affect drug metabolism. It begins by defining genetic polymorphism and describing the main types, including single nucleotide polymorphisms, insertions and deletions, and nucleotide repeat polymorphisms. It then discusses how genetic polymorphisms can alter drug metabolism through variations in metabolic enzyme activity and discusses specific examples of polymorphisms in key drug metabolizing enzymes like CYP2D6, CYP2C9, and N-acetyltransferases. The document emphasizes how understanding genetic variations in drug metabolism is important for predicting inter-individual differences in drug responses.
This document discusses drug transporters and their role in drug absorption, distribution, metabolism and excretion. It covers the main types of transporters including ABC transporters like P-glycoprotein and SLC transporters. It describes how transporters regulate the movement of drugs across membranes in organs like the intestine, liver and kidneys. It also discusses how overexpression of transporters like P-glycoprotein can lead to multidrug resistance and the various approaches used to overcome resistance, such as inhibitors of transporter activity.
The document discusses approaches to enhance recombinant protein and plasmid production in E. coli, including:
1) Evaluating fusion partners like His-MBP, host strains like Rosetta-gami 2, and chaperones from Takara to increase soluble protein expression. His-MBP was most effective while chaperones had varying impacts.
2) Testing different growth media and found TURBO supported highest plasmid yield while MEG had highest volumetric yield for plasmid DNA production.
3) Comparing inducing chaperone teams dnaK-dnaJ-grpE and dnaK-dnaJ-grpE-groES-groEL at inoculation or with the target protein, finding inducing at
This document discusses cytochrome P450 2D6 (CYP2D6), an enzyme involved in drug metabolism. It notes that CYP2D6 is one of several cytochrome P450 enzymes that metabolize around 25% of clinically used drugs. The document outlines that CYP2D6 shows genetic polymorphisms that lead to variability in drug metabolism and response. It also describes the CYP2D6 gene location and alleles, and notes that genetic testing can identify variants associated with differences in CYP2D6 activity.
Canvax™ offers a wide range of high quality Human Recombinant Proteins for several research applications like ELISA, Western Blot, Antibody Production or Protein array.
This document summarizes a study investigating the role of a Plasmodium falciparum S33 proline aminopeptidase (PfPAP) in changes to host red blood cell deformability. The key findings are:
1) PfPAP contains a predicted protein export element suggesting it is exported into infected red blood cells. In silico modeling and recombinant protein studies confirmed PfPAP is a proline aminopeptidase.
2) Genetic deletion of PfPAP in P. falciparum led to an increase in the deformability of infected red blood cells and reduced adherence of infected cells to the endothelial cell receptor CD36 under flow conditions.
3) These results suggest PfP
Genetic variations in G protein-coupled receptors (GPCRs) can alter receptor function and cause diseases. Single nucleotide polymorphisms and other mutations have been linked to impaired or enhanced receptor signaling. For example, a mutation in the vasopressin V2 receptor causes nephrogenic diabetes insipidus by decreasing ligand binding and receptor expression. Similarly, mutations in chemokine receptors CCR5 and CCR2 impact HIV infection by altering receptor function or interaction with other coreceptors. Overall, GPCR polymorphisms are associated with diseases by changing ligand binding, receptor activation, trafficking, and coupling to downstream signaling pathways.
P-glycoprotein transporters are ATP-binding cassette transporters that pump substances out of cells and limit the prolonged effectiveness of chemotherapy drugs. P-glycoprotein is encoded by the MDR1 gene, contains 12 transmembrane domains and two ATP binding sites. It is expressed in the intestine, kidney, liver, placenta, and blood-brain barrier, protecting against toxins. Many chemotherapy drugs, antibiotics, and cardiovascular drugs are substrates. P-glycoprotein uses ATP hydrolysis to actively transport substrates unidirectionally out of cells. First generation inhibitors were substrates themselves and toxic. Second generation inhibitors had low affinity. Third generation inhibitors have high specificity and potency. Caco-2 cells are used
This document discusses P-glycoprotein (P-gp), an ATP-dependent efflux pump found in the cell membranes of many tissues. P-gp pumps many foreign substances, drugs, and toxins out of cells. It plays an important physiological role and contributes to multidrug resistance in cancer cells by transporting chemotherapy drugs out of the cells. The document outlines the structure, mechanism of action, substrates, inhibitors, and approaches to bypassing P-gp efflux, such as using nanocarrier drug delivery systems.
The document summarizes a study that identified potent and selective inhibitors of the Plasmodium falciparum M18 aspartyl aminopeptidase (PfM18AAP) enzyme via high-throughput screening. PfM18AAP plays an important role in malaria parasite growth and is a potential drug target. A fluorescence-based assay was developed to screen over 292,000 compounds, identifying two structurally related compounds that potently and selectively inhibited PfM18AAP in the low micromolar range. Both compounds were found to be noncompetitive inhibitors of PfM18AAP and inhibited malaria parasite growth, demonstrating their potential as antimalarial therapies.
The structure of the P-glycoprotein (P-gp) transporter was determined using x-ray crystallography. P-gp is responsible for multidrug resistance in cancer by actively transporting chemotherapeutic drugs out of cells. The structure revealed an internal cavity capable of binding various drugs through hydrophobic and aromatic interactions. It also showed an inward-facing conformation that could represent the transporter in its pre-transport state, ready to bind substrates. This work provides insight into P-gp's promiscuous drug binding that could help design new anticancer drugs and inhibitors of multidrug resistance.
This study investigated the degradation of soluble and myofibrillar proteins in rabbit muscle extracts by the ATP-ubiquitin-proteasome pathway. The key findings were:
1) Degradation of soluble muscle proteins was stimulated up to 6-fold by ATP and inhibited by removal of proteasomes or addition of proteasome inhibitors, indicating these proteins are substrates of the ATP-ubiquitin-proteasome pathway.
2) Purified myofibrillar proteins (myosin, actin, troponin, tropomyosin) added to the extracts were also degraded in an ATP-dependent manner, showing they can serve as substrates of this pathway.
3)
This document provides a comprehensive review of nanoparticle delivery systems for paclitaxel (PX), an effective but toxic chemotherapy drug. It discusses the limitations of the standard PX formulation using Cremophor EL and ethanol. Nanoparticle delivery can overcome these issues by improving PX's solubility, pharmacokinetics, and targeting to tumors while reducing toxicity. The review covers many PX nanoparticle formulations including polymeric nanoparticles (especially PLGA), lipid-based nanoparticles, polymer conjugates, inorganic nanoparticles, carbon nanotubes, nanocrystals, and cyclodextrin nanoparticles. It finds that these systems enhance PX's efficacy against cancer cells in vitro and tumor growth inhibition in vivo compared to free P
This review article discusses mTOR inhibitors and their use in cancer and transplantation. It outlines the mTOR signaling pathway and how mTOR inhibitors like sirolimus, everolimus and temsirolimus work. It describes how mTOR inhibitors are used to prevent organ rejection after transplantation. It also discusses how dysregulation of the PI3K/Akt/mTOR pathway promotes cancer and how mTOR inhibitors have shown efficacy in renal cell carcinoma and mantle cell lymphoma. The article concludes that biomarkers are needed to identify cancers sensitive to mTOR inhibition and that combination targeted therapies may help overcome resistance.
P-glycoprotein is an ATP-binding cassette transporter that protects the body by pumping various molecules, including drugs and toxins, out of cells and preventing their accumulation. It is located on the membranes of excretory organs like the liver, kidneys, and intestines. P-gp recognizes substrates in the cell and uses ATP hydrolysis to flip them out through a central pore. Its physiological role and ability to efflux various drugs has important implications for pharmacokinetics and clinical outcomes like resistance to cancer treatments. Genetic polymorphisms in P-gp may also influence the effectiveness of drugs it transports like HIV protease inhibitors.
The document discusses the effect of substrate concentration on the enzyme catalase. It was hypothesized that increasing the concentration of hydrogen peroxide substrate would increase the rate of catalase activity, measured by decreased time for an enzyme-coated paper circle to rise in a solution. Potato samples containing catalase were placed in hydrogen peroxide solutions of varying concentrations and temperatures to produce oxygen. Results showed less gas was produced at higher inhibitor concentrations, as more enzymes were inhibited, reducing active sites for reaction.
Inhibition of glutathione by buthionine sulfoximine enhanced the anti-cancer ...Ashujit
Multiple myeloma (MM) is an incurable blood cancer. Melphalan is an alkylating agent given prior to stem cell transplantation to MM patients. Increased glutathione confers resistance to melphalan. This study investigate the effect of inhibition of glutathione by BSO in preclinical models of MM. Pretreatment with BSO enhanced the anti-cancer effect of melphalan in cell lines and animal models. BSO and melphalan combination was well tolerated by animals and enhanced the survival as compared to controls, BSO and melphalan alone. BSO enhanced depth and duration of responses induced by melphalan. In the combination group, majority of treated animals achieved complete response (CR) and more than 20% had maintained CR. Also, the survival of animals was doubled after combination treatment as compared to BSO or melphalan alone. Mechanistic investigation demonstrated that BSO enhanced melphalan induced DNA damage, caspase cleavage and apoptosis. The combination also achieved multi-logs of cells kills in nine human multiple myeloma cell lines and primary MM cells isolated from blood and bone marrows. Interestingly, the effect of BSO and melphalan combination was abolished when cells were treated with N-acetyl cysteine and sodium thiosulfate but not with vitamin C and vitamin E. This observation suggests that effect of BSO is primarily driven by its ability to deplete glutathione and therefore preventing melphalan detoxification. Together, this study provides framework for testing the combination in a Phase I trial.
This document summarizes efforts to identify novel small molecule inhibitors of choline kinase (ChoK) through a structure-based fragment drug discovery approach. ChoK plays a key role in cancer cell proliferation and is a promising drug target. NMR screening of 1152 fragments identified 55 initial hits binding to ChoK. Further biophysical validation and structural optimization led to novel symmetrical and nonsymmetrical ChoK inhibitors with nanomolar binding affinities. These inhibitors reduced levels of phosphocholine and induced apoptosis in breast cancer cell lines but not control cells, validating ChoK as a drug target.
This document summarizes the development of optimized aptamer-siRNA chimeras for targeting prostate cancer cells expressing prostate-specific membrane antigen (PSMA). The researchers:
1) Truncated the aptamer portion of an earlier chimera to facilitate chemical synthesis while retaining binding to PSMA-expressing cells.
2) Introduced modifications to the siRNA portion like overhangs and strand swapping to enhance processing by Dicer and loading of the guide strand into RISC, increasing gene silencing effects.
3) Showed that the optimized second-generation chimeras achieved over 50 times greater silencing than the original chimera in vitro and induced tumor regression in mice after systemic administration, representing
The document summarizes research into how a furanone compound from marine origins can reduce lipid accumulation in cells in vitro by targeting the LXRα and PPARα nuclear receptors. The study used techniques like fluorescent immunocytochemistry, Western blotting, qPCR, and cell viability assays to examine the compound's effects on receptor expression and activity, as well as lipid levels. Results demonstrated that the furanone enhanced proteins involved in cholesterol efflux like ABCA1 and ABCG1 while increasing LXRα and PPARα expression. This suggests it lowers lipids by influencing multiple metabolic pathways regulated by these receptors. The conclusions discuss the compound's potential natural therapeutic application for hyperlipidemia by modulating the important
This document summarizes recent efforts to design small molecule epigenetic modulators that target histone acetyltransferases (HATs), histone deacetylases (HDACs), and histone methyltransferases. It describes the roles of HATs, HDACs, and histone methyltransferases in controlling gene expression through histone and DNA modifications. A handful of HAT inhibitors have been identified, including bisubstrate analogs, natural products, and synthetic small molecules. Inhibitors of HDACs and DNA methyltransferases are more established as epigenetic modulators in cancer treatment. The development of small molecule inhibitors targeting the various writers, erasers, and readers of epigenetic marks offers promise
This study investigated how changes in lipid nanoparticle (LNP) formulation impact mRNA delivery and endocytosis. The researchers found that an optimized LNP formulation for mRNA delivery showed decreased efficacy in NPC1-deficient cells, whereas the original LNP formulation used for siRNA delivery showed increased efficacy. Inhibiting cholesterol trafficking also only decreased efficacy for the optimized LNPs, suggesting it relies on this pathway. Modifying the optimized LNP formulation step-wise to match the original formulation reversed these trends, implicating changes in PEG percentage and phospholipid composition as causes for the observed efficacy differences between formulations. The results suggest LNP formulation influences subcellular trafficking and endocytosis pathways utilized for nucleic acid delivery.
Polymorphism affecting drug metabolism .heenakazi4
This document discusses genetic polymorphisms that affect drug metabolism. It begins by defining genetic polymorphism and describing the main types, including single nucleotide polymorphisms, insertions and deletions, and nucleotide repeat polymorphisms. It then discusses how genetic polymorphisms can alter drug metabolism through variations in metabolic enzyme activity and discusses specific examples of polymorphisms in key drug metabolizing enzymes like CYP2D6, CYP2C9, and N-acetyltransferases. The document emphasizes how understanding genetic variations in drug metabolism is important for predicting inter-individual differences in drug responses.
This document discusses drug transporters and their role in drug absorption, distribution, metabolism and excretion. It covers the main types of transporters including ABC transporters like P-glycoprotein and SLC transporters. It describes how transporters regulate the movement of drugs across membranes in organs like the intestine, liver and kidneys. It also discusses how overexpression of transporters like P-glycoprotein can lead to multidrug resistance and the various approaches used to overcome resistance, such as inhibitors of transporter activity.
The document discusses approaches to enhance recombinant protein and plasmid production in E. coli, including:
1) Evaluating fusion partners like His-MBP, host strains like Rosetta-gami 2, and chaperones from Takara to increase soluble protein expression. His-MBP was most effective while chaperones had varying impacts.
2) Testing different growth media and found TURBO supported highest plasmid yield while MEG had highest volumetric yield for plasmid DNA production.
3) Comparing inducing chaperone teams dnaK-dnaJ-grpE and dnaK-dnaJ-grpE-groES-groEL at inoculation or with the target protein, finding inducing at
This document discusses cytochrome P450 2D6 (CYP2D6), an enzyme involved in drug metabolism. It notes that CYP2D6 is one of several cytochrome P450 enzymes that metabolize around 25% of clinically used drugs. The document outlines that CYP2D6 shows genetic polymorphisms that lead to variability in drug metabolism and response. It also describes the CYP2D6 gene location and alleles, and notes that genetic testing can identify variants associated with differences in CYP2D6 activity.
Canvax™ offers a wide range of high quality Human Recombinant Proteins for several research applications like ELISA, Western Blot, Antibody Production or Protein array.
This document summarizes a study investigating the role of a Plasmodium falciparum S33 proline aminopeptidase (PfPAP) in changes to host red blood cell deformability. The key findings are:
1) PfPAP contains a predicted protein export element suggesting it is exported into infected red blood cells. In silico modeling and recombinant protein studies confirmed PfPAP is a proline aminopeptidase.
2) Genetic deletion of PfPAP in P. falciparum led to an increase in the deformability of infected red blood cells and reduced adherence of infected cells to the endothelial cell receptor CD36 under flow conditions.
3) These results suggest PfP
Genetic variations in G protein-coupled receptors (GPCRs) can alter receptor function and cause diseases. Single nucleotide polymorphisms and other mutations have been linked to impaired or enhanced receptor signaling. For example, a mutation in the vasopressin V2 receptor causes nephrogenic diabetes insipidus by decreasing ligand binding and receptor expression. Similarly, mutations in chemokine receptors CCR5 and CCR2 impact HIV infection by altering receptor function or interaction with other coreceptors. Overall, GPCR polymorphisms are associated with diseases by changing ligand binding, receptor activation, trafficking, and coupling to downstream signaling pathways.
P-glycoprotein transporters are ATP-binding cassette transporters that pump substances out of cells and limit the prolonged effectiveness of chemotherapy drugs. P-glycoprotein is encoded by the MDR1 gene, contains 12 transmembrane domains and two ATP binding sites. It is expressed in the intestine, kidney, liver, placenta, and blood-brain barrier, protecting against toxins. Many chemotherapy drugs, antibiotics, and cardiovascular drugs are substrates. P-glycoprotein uses ATP hydrolysis to actively transport substrates unidirectionally out of cells. First generation inhibitors were substrates themselves and toxic. Second generation inhibitors had low affinity. Third generation inhibitors have high specificity and potency. Caco-2 cells are used
This document discusses P-glycoprotein (P-gp), an ATP-dependent efflux pump found in the cell membranes of many tissues. P-gp pumps many foreign substances, drugs, and toxins out of cells. It plays an important physiological role and contributes to multidrug resistance in cancer cells by transporting chemotherapy drugs out of the cells. The document outlines the structure, mechanism of action, substrates, inhibitors, and approaches to bypassing P-gp efflux, such as using nanocarrier drug delivery systems.
The document summarizes a study that identified potent and selective inhibitors of the Plasmodium falciparum M18 aspartyl aminopeptidase (PfM18AAP) enzyme via high-throughput screening. PfM18AAP plays an important role in malaria parasite growth and is a potential drug target. A fluorescence-based assay was developed to screen over 292,000 compounds, identifying two structurally related compounds that potently and selectively inhibited PfM18AAP in the low micromolar range. Both compounds were found to be noncompetitive inhibitors of PfM18AAP and inhibited malaria parasite growth, demonstrating their potential as antimalarial therapies.
The structure of the P-glycoprotein (P-gp) transporter was determined using x-ray crystallography. P-gp is responsible for multidrug resistance in cancer by actively transporting chemotherapeutic drugs out of cells. The structure revealed an internal cavity capable of binding various drugs through hydrophobic and aromatic interactions. It also showed an inward-facing conformation that could represent the transporter in its pre-transport state, ready to bind substrates. This work provides insight into P-gp's promiscuous drug binding that could help design new anticancer drugs and inhibitors of multidrug resistance.
This study investigated the degradation of soluble and myofibrillar proteins in rabbit muscle extracts by the ATP-ubiquitin-proteasome pathway. The key findings were:
1) Degradation of soluble muscle proteins was stimulated up to 6-fold by ATP and inhibited by removal of proteasomes or addition of proteasome inhibitors, indicating these proteins are substrates of the ATP-ubiquitin-proteasome pathway.
2) Purified myofibrillar proteins (myosin, actin, troponin, tropomyosin) added to the extracts were also degraded in an ATP-dependent manner, showing they can serve as substrates of this pathway.
3)
This document provides a comprehensive review of nanoparticle delivery systems for paclitaxel (PX), an effective but toxic chemotherapy drug. It discusses the limitations of the standard PX formulation using Cremophor EL and ethanol. Nanoparticle delivery can overcome these issues by improving PX's solubility, pharmacokinetics, and targeting to tumors while reducing toxicity. The review covers many PX nanoparticle formulations including polymeric nanoparticles (especially PLGA), lipid-based nanoparticles, polymer conjugates, inorganic nanoparticles, carbon nanotubes, nanocrystals, and cyclodextrin nanoparticles. It finds that these systems enhance PX's efficacy against cancer cells in vitro and tumor growth inhibition in vivo compared to free P
This review article discusses mTOR inhibitors and their use in cancer and transplantation. It outlines the mTOR signaling pathway and how mTOR inhibitors like sirolimus, everolimus and temsirolimus work. It describes how mTOR inhibitors are used to prevent organ rejection after transplantation. It also discusses how dysregulation of the PI3K/Akt/mTOR pathway promotes cancer and how mTOR inhibitors have shown efficacy in renal cell carcinoma and mantle cell lymphoma. The article concludes that biomarkers are needed to identify cancers sensitive to mTOR inhibition and that combination targeted therapies may help overcome resistance.
P-glycoprotein is an ATP-binding cassette transporter that protects the body by pumping various molecules, including drugs and toxins, out of cells and preventing their accumulation. It is located on the membranes of excretory organs like the liver, kidneys, and intestines. P-gp recognizes substrates in the cell and uses ATP hydrolysis to flip them out through a central pore. Its physiological role and ability to efflux various drugs has important implications for pharmacokinetics and clinical outcomes like resistance to cancer treatments. Genetic polymorphisms in P-gp may also influence the effectiveness of drugs it transports like HIV protease inhibitors.
The document discusses the effect of substrate concentration on the enzyme catalase. It was hypothesized that increasing the concentration of hydrogen peroxide substrate would increase the rate of catalase activity, measured by decreased time for an enzyme-coated paper circle to rise in a solution. Potato samples containing catalase were placed in hydrogen peroxide solutions of varying concentrations and temperatures to produce oxygen. Results showed less gas was produced at higher inhibitor concentrations, as more enzymes were inhibited, reducing active sites for reaction.
Inhibition of glutathione by buthionine sulfoximine enhanced the anti-cancer ...Ashujit
Multiple myeloma (MM) is an incurable blood cancer. Melphalan is an alkylating agent given prior to stem cell transplantation to MM patients. Increased glutathione confers resistance to melphalan. This study investigate the effect of inhibition of glutathione by BSO in preclinical models of MM. Pretreatment with BSO enhanced the anti-cancer effect of melphalan in cell lines and animal models. BSO and melphalan combination was well tolerated by animals and enhanced the survival as compared to controls, BSO and melphalan alone. BSO enhanced depth and duration of responses induced by melphalan. In the combination group, majority of treated animals achieved complete response (CR) and more than 20% had maintained CR. Also, the survival of animals was doubled after combination treatment as compared to BSO or melphalan alone. Mechanistic investigation demonstrated that BSO enhanced melphalan induced DNA damage, caspase cleavage and apoptosis. The combination also achieved multi-logs of cells kills in nine human multiple myeloma cell lines and primary MM cells isolated from blood and bone marrows. Interestingly, the effect of BSO and melphalan combination was abolished when cells were treated with N-acetyl cysteine and sodium thiosulfate but not with vitamin C and vitamin E. This observation suggests that effect of BSO is primarily driven by its ability to deplete glutathione and therefore preventing melphalan detoxification. Together, this study provides framework for testing the combination in a Phase I trial.
This study found that combining the histone deacetylase inhibitor romidepsin with inhibitors of the MAPK and PI3K pathways leads to selective toxicity in cancer cell lines with mutant Ras. The combination treatment increased apoptosis via the intrinsic apoptotic pathway in a Bax-dependent manner. Similar results were found when combining the histone deacetylase inhibitor belinostat with MAPK and PI3K inhibitors. This dual inhibition approach may help overcome resistance to histone deacetylase inhibitors in solid tumors with Ras mutations.
Discovery and Mechanistic Study of Mycobacterium tuberculosis PafA Inhibitors...Dr.Shuaib Ahmad
The document describes research into discovering and characterizing inhibitors of the Mycobacterium tuberculosis protein PafA. Key points:
1. Researchers developed a high-throughput screening assay to identify inhibitors of PafA from a library of compounds. This identified two inhibitors, E-H8 and V-G3, and one activator, B-F2.
2. Further analysis found that E-H8 (called ST1926) selectively inhibited Mtb PafA, while V-G3 inhibited both Mtb and Corynebacterium glutamicum PafA. ST1926 did not work by binding the substrate PanB.
3. ST1926 was found to increase the
This document describes the development of a bimolecular fluorescence complementation (BiFC) assay to visualize and quantify interactions between the tumor suppressor protein p53 and its inhibitor Mdm2 in live mammalian cells. The assay uses fusion proteins containing non-fluorescent fragments of the Venus fluorescent protein tagged to p53 and Mdm2. Interaction between the proteins reconstitutes Venus fluorescence. Nutlin-3, a known disruptor of p53-Mdm2 binding, reduced BiFC signal and increased cell death when added, validating the assay. A library of 33 phosphatase inhibitors was also screened using this assay to identify potential modulators of p53-Mdm2 complex formation.
Over-expression of APOBEC3B (A3B) has little to no effect on the efficacy of 5-Fluorouracil (5-FU) in killing mammary epithelial MCF10A cells. The study found that transfecting, transducing, or treating MCF10A cells with PMA to induce A3B expression did not significantly impact cell viability when treated with varying concentrations of 5-FU. Repeating the experiments in A3B-high cancer cell lines and investigating the mechanisms of how A3B and 5-FU may complement each other could provide insights for personalized cancer treatment.
Collaborative science to identify novel inhibitors for the pseudokinase TRIB2Morgan Focas
This document summarizes research into developing inhibitors for the pseudokinase TRIB2. It describes synthesizing additional quantities of the compound GW881A, which was identified as a potent hit from screening the Published Kinase Inhibitor Set in a differential scanning fluorimetry assay of TRIB2. The synthesis involved a three-step route to obtain the final product. Additional analogs were screened in the TRIB2 assay to gain insight into structure-activity relationships, with the goal of improving potency. GW881A remained the most potent inhibitor identified.
3-Formylchromone (3-FC) is a synthetic compound that may have anti-cancer effects through suppression of the STAT3 signaling pathway in hepatocellular carcinoma (HCC) cells. The study investigated the effects of 3-FC on STAT3 activation and the expression of STAT3-regulated genes involved in cell proliferation and survival in HCC cells. The results showed that 3-FC inhibited STAT3 activation by suppressing upstream kinases like JAK1 and JAK2. It also downregulated cyclin D1, Bcl-2, Bcl-xL and other genes regulated by STAT3. Furthermore, 3-FC treatment inhibited HCC cell proliferation and induced apoptosis. Therefore, 3
This document summarizes research aimed at developing a more efficient system for screening potential drug inhibitors of P-glycoprotein (P-gp), an ATP-binding cassette transporter that pumps chemotherapeutics out of multidrug-resistant cancer cells. The researchers introduced the human MDR1 gene, which encodes P-gp, into a bacterial plasmid and transformed E. coli cells to express the protein. Sequence analysis confirmed the MDR1 gene was present in the plasmid as designed. Developing this bacterial screening system could allow high-throughput screening of potential P-gp inhibitors to identify drugs that could combat multidrug resistance in cancer.
Simplified receptor based pharmacophore approach to retrieve potent ptp lar i...rajmaha9
Simplified Receptor Based Pharmacophore Approach to Retrieve Potent PTP-LAR Inhibitors Using Apoenzyme
M. Elizabeth Sobhia*
Department of Pharmacoinformatics, National Institute of Pharmaceutical Education and Research (NIPER), S.A.S.
Nagar, Punjab 160062, India
Abstract: The design of biological active compounds from the apoenzyme is still a challenging task. Herein a simple yet efficient technique is reported to generate a receptor based pharmacophore solely using a ligand-free protein crystal structure. Human leukocyte antigen-related phosphatase (PTP-LAR) is an apoenzyme and a receptor like transmembrane phosphatase that has emerged as a drug target for diabetes, obesity and cancer. The prior knowledge of the active residues responsible for the mechanism of action of the protein was used to generate the LUDI interaction map. Then, the complement negative image of the binding site was used to generate the pharmacophore features. A unique strategy was
followed to design a pharmacophore query maintaining crucial interactions with all the active residues, essential for the enzyme inhibition. The same query was used to screen several databases consisting of the Specs, IBS, iniMaybridge, NCI and an in-house PTP inhibitor databases. In order to overcome the common bioavailability problem associated with phosphatases, the hits obtained were filtered by Lipinski’s Rule of Five, SADMET properties and validated by docking studies in Glide and GOLD. These docking studies not only suggest the essential ligand binding interactions but also the binding patterns necessary for the LAR inhibition. The ligand pharmacophore mapping studies further validated the
screened protocol and supported that the final screened molecules, presumably, showed potent inhibitory activity.
Subsequently, these molecules were subjected to Derek toxicity predictions and nine new molecules with different
scaffold were obtained as non-toxic PTP-LAR inhibitors. The present prospective strategy is a powerful technique to
identify potent inhibitors using the protein 3D structure alone and is a valid alternative to other structure-based and
random docking approaches.
Using computational models like pharmacophores and machine learning, researchers developed in silico models to predict interactions of drugs and compounds with important human drug transporters. Pharmacophore models of P-gp, ASBT, and OCTN2 were able to retrieve known substrates and inhibitors from databases and discover new interacting drug classes. A Bayesian model for ASBT performed well in classification, though external test sets remained challenging. Transporter models aid understanding of absorption, distribution, and toxicity of drugs.
1) Researchers developed anthranilic acid sulfonamides as inhibitors of methionine aminopeptidase-2 (MetAP2), a potential cancer therapy target. Initial compounds had micromolar affinity for MetAP2 but also extensively bound to human serum albumin (HSA), limiting cellular activity.
2) Using protein crystal structures of compounds bound to MetAP2 and HSA, researchers designed modifications to reduce HSA binding by adding a positively charged tertiary amine to the compounds. This reduced the HSA shift in potency while maintaining MetAP2 inhibition.
3) Various linkers connecting the amine to the core structure were evaluated. Compounds with an alkenyl linker
Molecular mechanisms of action and potential biomarkers of growth inhibition ...Enrique Moreno Gonzalez
Molecular targeted therapy has emerged as a promising treatment of Hepatocellular carcinoma (HCC). One potential target is the Src family Kinase (SFK). C-Src, a non-receptor tyrosine kinase is a critical link of multiple signal pathways that regulate proliferation, invasion, survival, metastasis, and angiogenesis. In this study, we evaluated the effects of a novel SFK inhibitor, dasatinib (BMS-354825), on SFK/FAK/p130CAS, PI3K/PTEN/Akt/mTOR, Ras/Raf/MAPK and Stats pathways in 9 HCC cell lines.
This study investigated the mechanisms by which the HDAC inhibitor vorinostat induces apoptosis in acute myeloid leukemia (AML) cells. The results showed that vorinostat causes early DNA damage and activation of p38 MAPK in AML cell lines. Activation of p38 was required for vorinostat-induced G2/M cell cycle arrest and apoptosis. However, the role of p38 activation varied among different HDAC inhibitors, being pro-apoptotic for vorinostat but not necessary for apoptosis induced by other inhibitors. This highlights the importance of understanding specific mechanisms of individual HDAC inhibitors.
Genetic Dna And Bioinformatics ( Accession No. Xp EssayJessica Deakin
This document discusses natural language processing (NLP) for Sanskrit and different part-of-speech (POS) tagging methods. It introduces NLP and POS tagging, noting that POS tagging is the first step in developing NLP applications. It then discusses different tagsets and POS tagging approaches for Sanskrit like hidden Markov models and conditional random fields.
This study analyzed the salicylic acid methyltransferase (SAMT) protein in Asclepias curassavica milkweed. The researcher extracted RNA from A. curassavica leaf tissue, amplified the SAMT gene, cloned it into a vector plasmid, and performed assays. Analysis of the SAMT amino acid sequence showed motifs predicting preference for salicylic acid over benzoic acid. Enzyme assays using GC-MS confirmed SAMT preferentially methylated salicylic acid. Statistical analysis supported the hypothesis that SAMT amino acid sequence correlates with substrate preference.
This document describes a study that used protein microarrays to systematically measure interactions between SH2/PTB domains and sites of tyrosine phosphorylation on receptor tyrosine kinases (RTKs) and adaptor proteins. They found that adaptor proteins, like RTKs, have many high affinity interactions with other adaptor proteins, demonstrating a high degree of connectivity. Additionally, proteins known to drive cancer through aberrant signaling, including both RTKs and adaptor proteins, tend to have more interaction partners than non-oncogenic proteins. This suggests that connectivity within signaling networks may help identify new potential drug targets for cancer treatment.
1) Prodigiosin, a bacterial metabolite, induces apoptosis in human breast cancer cells. Gene expression profiling found that prodigiosin strongly increased expression of the NAG-1 gene.
2) Experiments showed that prodigiosin triggers accumulation of the tumor suppressor protein p53, but induction of NAG-1 was independent of p53.
3) Prodigiosin causes inhibition of AKT and activation of glycogen synthase kinase-3B (GSK-3B). Induction of NAG-1 and apoptosis correlated with GSK-3B activation. Inhibiting GSK-3B reduced apoptosis, suggesting GSK-3B plays a key role in the proap
Involvement of Interleukin-6 induced PI3K/Akt/mTor pathway in the regulation ...eshaasini
Hepatocellular Carcinoma (HCC) is an invasive cancer. Alphafoetoprotein (AFP) is a diagnostic marker for HCC directly related to the disease agressivity. Telomerase, is expressed by 90% of HCC. PI3K/Akt/mTOR pathway wich is regulated by IL-6 is activated in the HCC. Our aim is to investigate the effect of IL-6 on AFP and telomerase secretion in HepG2/C3A and PLC/ PRF/5 cell lines.
Involvement of Interleukin-6 Induced PI3K/Akt/mTor Pathway in the Regulation ...semualkaira
Hepatocellular Carcinoma (HCC) is an invasive
cancer. Alphafoetoprotein (AFP) is a diagnostic marker for HCC
directly related to the disease agressivity. Télomérase, is expressed
by 90% of HCC. PI3K/Akt/mTOR pathway wich is regulated by
IL-6 is activated in the HCC. Our aim is to investigate the effect
of IL-6 on AFP and telomerase secretion in HepG2/C3A and PLC/
PRF/5 cell lines.
Involvement of Interleukin-6 Induced PI3K/Akt/mTor Pathway in the Regulation ...
AAPS Poster
1. Wuyuan Lu et al. JBC, 398, 200-213 (2010)
The E3 ubiquitin ligase, MDM2, negatively regulates the activity of p53 via two main
mechanisms: (1) reduces transcriptional activity by sequestering the N-terminal
transactivation domain of p53 and (2) ubiquitylates lysines in the C-terminal domain of p53,
thus promoting p53 degradation by the proteosome. The structural basis for the first
mechanism has been well characterized and consists of a minimum binding sequence within
19-26p53 that forms an amphiphilc α-helix containing three critical residues; Phe19, Trp23,
and Leu26. These residues are located within a hydrophobic cavity of MDM2. Previous in
vitro studies by Bernal and colleagues have demonstrated reactivation of the p53 tumor
suppressor cascade following treatment with a small peptide bearing the key interacting
residues. We plan to use a solid phase peptide synthesis method to generate a 14 amino
acid length peptide (p53i) containing the minimum binding sequence necessary for MDM2
interaction.
In recent years, the advent of small peptide therapeutic agents has resulted in the ability
to enhance target specificity and blunt toxicity compared to small molecule drugs. Despite
this, serum instability and rapid renal clearance have plagued their widespread usage.
Lipidation and enhanced plasma protein binding are two strategies capable of extending the
half life of prodrugs. Our plan is to combine these methods by synthesizing p53i conjugated
to FA (FA-p53i); creating a species capable of being incorporated and transported by HSA.
The application of the synthesis described above is to develop an efficient drug carrier
system utilizing HSA for the targeted co-delivery of methotrexate (MTX) and FA-p53i. Such a
system offers the unique ability for one drug formulation to simultaneously deliver two anti-
cancer agents to a single cell and thus, promote a supra-additive effect on apoptosis. MTX is
a well described and widely used chemotherapeutic agent whose mechanism of action relies
on the inhibition of key enzymatic activities required for DNA synthesis. It will thus serve as a
model drug for the development of this platform technology.
Introduction
Reactivating the p53 Pathway Using Human Serum Albumin to
Co-Deliver Methotrexate and a p53-Derived Peptide
Michelle R. Joshi1, Nianhuan Yao1, Zhiyu Li1
1Department of Pharmaceutical Sciences, Philadelphia College of Pharmacy, University of the Sciences, Philadelphia, PA 19104
Caspase-3 Acl I p53i Spe I Nhe I
DEVDG ETF SDLWKLLPETAA TS AS Amino acid sequence
DNA sequence
Caspase-3 PMI ScaI SacII Nhe I
DEVDG TSFAETWALLSP PR AS Amino acid sequence
DNA sequence
Cargo: FA-Methotrexate and FA-p53i
1) Methotrexate
MTX has been conjugated to:
• Albumin Clin. Cancer Res. 9, 1917-26 (2003).
• Gelatin Pharm. Res. 17, 1309-15 (2000).
• Fibrinogen Cancer Lett. 148, 189-95 (2000).
• Polyethylene glycol (PEG) Bioconjug Chem. 13, 773-85 (2002).
• Tumor-targeting Ab Nat. Biotechnol. 23, 1137-46 (2005).
Conjugation has been shown to increase plasma retention and
enhance accumulation in tumor tissue
2) p53-Derived Peptide
Designed to inhibit native p53-MDM2
interaction
3) Design and construct a recombinant HSA C-terminal fusion protein
2
HSA
p53iMTX
alternative strategy
wt p53
high
affinity
peptide
PMI
Methods
Results
Figure 2
1 2 3 4 5 6 7 8
HSA:FA-FITC-p53i (1:4)
unlabeled FA-FITC (pmol) 120 240 480360 960720- -
FA-bound HSA
Free FA
Figure 2: FA-FITC-p53i forms
a stable complex with human
serum albumin that is not
displaced by the presence of
unlabeled FA. HSA/FA-FITC-
p53i complexes were allowed to
form at a 1:4 molar ratio
(HSA:FA-FITC-p53i; 120
pmol:480 pmol) as described in
Methods. Next, samples were
incubated with increasing
concentrations of unlabeled FA. The absence of a lower band indicates FA-FITC-p53i was
not displaced by the unlabeled FA even at the highest concentration. The upper band
corresponds to the less mobile HSA/FA complex, while the lower band contains unbound
free FA-FITC or free FA-FITC-p53i.
Construction of recombinant HSA fusion proteins
• Amplified rHSA-p53i DNA by PCR
• Ligated rHSA-p53i into pPICZα A vector (Invitrogen)
• Transformed competent E.Coli cells using plasmid DNA & select for
zeocin resistance
• Isolated single colonies from overnight culture & grow up in selection
media
• Purified plasmid DNA & confirmed DNA sequence by restriction digest
• Linearized plasmid DNA & transformed Pichia yeast cells
• Expressed protein in Pichia strain, isolated and purified recombinant
protein
Negative control
742 bp
4608 bp
1763 bp
3587 bp
23K bp
9.4K bp
6.6K bp
4.4K bp
2.3K bp
2K bp
KasI/XhoI digest SpeI/XbaI digest
Caspase-3 Acl I p53i Spe I Nhe I
DEVDG ETF SDLWKLLPETAA TS AS Amino acid sequence
DNA sequenceKasI
Background
Co-Delivery
Combination Therapy
Vs.
Both anti-cancer agents reach target
Can use two species with complimentary mechanisms
to promote a robust apoptotic response
Ease of formulation & administration
One agent → multiple effects
Enhanced therapeutic effect at lower doses
Targeted co-delivery reduces side effects due to
toxicity in normal tissues
Benefits of Co-Delivery
Co-Delivery Approach
• Most abundant plasma protein
• Molecular weight = 66.5 kDa
• Long half-life
• Solublizing agent for long chain FA’s
• Binds a number of drugs
• Proven lack of toxicity and immunogenicity1
• Accumulates in malignant and inflamed tissue2
Nat Struct Biol. 5(9), 827-35 (1998).
Carrier: Human Serum Albumin1
Background
N-protected C-terminal amino acid residue was anchored via its
COOH group to the hydroxyl group of Wang resin. Side chain
functional groups of amino acids were masked with permanent
protection groups. The N-terminal amino group was protected by
a temporary moiety that can be removed for coupling to the next
residue. Deprotection/coupling process was repeated until
desired sequence was complete. Peptide was then released
from resin and side chain protecting groups were removed.
Resulting peptide was detected by ESI/MS and purified by HPLC.
Mol. Biotechnology. 33, 242-254 (2006).
Solid phase peptide synthesis
Methods
Synthesis of FA-Modified FITC, FA-Modified p53i,
and FA-Modified MTX
Fmoc-Lys(Alloc) was first coupled to Wang resin. After Fmoc deprotection, palmitic acid was
coupled to the a- amino group of Lys. After Alloc deprotection, Fmoc-SS-linker and NHS-
Fluorescein were coupled sequentially. The final product was cleaved using TFA.
Albumin/Fatty Acid Mobility Shift Assay
For experiments designed to detect albumin/FA-p53i complex formation, 120 pmol albumin
(dissolved in 1X PBS) was incubated +/- FITC-labeled FA-p53i at desired molar ratios.
Experiments aimed at detecting displacement of FA-FITC-p53i by unlabeled FA included an
initial incubation carried out as described above, but at a fixed albumin:FA-FITC-p53i molar
ratio. Following this incubation, unlabeled FA was added at increasing molar ratios up to 1:8
(albumin:unlabeled FA). Reactions were conducted in 20 µl of PBS under room temperature
for 30 minutes. The products were separated using Tris-Boric polyacrylamide gel 12 mA for
20 minutes. The gel was visualized under 305 nm UV.
Cells were plated in standard growth media at approximately 40% confluence and allowed to
attach overnight. On day 2, MTX, FA-MTX, HSA/MTX, HSA/FA-MTX complexes or HSA
fusion proteins were added at the indicated concentrations and allowed to incubate at
37ºC/5%CO2 for the indicated time period. Cell proliferation was then measured by CyQuant
assay (Invitrogen). Data represented three replicas at indicated concentrations.
Cytotoxicity Assays
1 2 3 4 5 6 7 8 9 10
Figure 1: Recombinant
HSA fusion proteins
are able to form
complexes with FA-
FITC. Recombinant HSA
fusion proteins as well
as wild type HSA were
incubated at the
indicated molar ratios
Figure 1
with FA-FITC. The speed at which molecules move through the gel is dependent on size
and charge. The upper band corresponds to the less mobile HSA/FA complex, while the
lower band contains unbound free FA-FITC.
Results
p53
MDM2
GAPDH
untreated
Nutlin
rHSA-p53i
rHSA-PMI
FA-p53i
Figure 5 Figure 5: FA-p53i, rHSA-p53i, and rHSA-PMI
increase p53, but not MDM2 protein
expression. This is in contrast to the actions
of the cis-imidazoline analog, nutlin. SJSA-1
cells were plated in standard growth media and
allowed to attach overnight. On day 2, 10 µM
nutlin, rHSA-p53i, rHSA-PMI or FA-p53i were
added in RPMI media containing 1% FBS +
0.05% DMSO and allowed to incubate x 24 hrs.
Cell monolayers were then washed, lysed and
immunoblotted for p53 and MDM2 (Santa Cruz).
P53 protein expression increased by approximately 60% in rHSA-p53i-treated cells and
30% in both rHSA-PMI and FA-p53i treatments (as determined using Image J software),
while MDM2 expression did not change relative to untreated wells.
Figure 3
Figure 3: Cytotoxicity of
MTX, FA-MTX, HSA/MTX,
and HSA/FA-MTX
complexes. Cell
proliferation was measured
by CyQuant assay
(Invitrogen). Data
represented three replicas
at indicated concentrations.
Experiments were repeated
twice. MTX and FA-MTX showed comparable cytotoxicity in MDA-MB-435 and SKBR-3 cells.
In MCF-7 cell, cytotoxicity of FA-MTX was about 3 times lower than that of MTX. FA
modification on MTX has no obvious effects on in vitro cytotoxicity.
Figure 4
Figure 4: Effect of MTX and FA-MTX on H1299 cells
xenografts. Fifteen mice were randomly split into 3
groups for USP saline, MTX, and FA-MTX treatment.
Cancer cells were injected as described in Methods and
tumor size was measured 2X per week. MTX (25 mg/kg)
and FA-MTX (equal to MTX 4.15 mg/kg) were
administered i.p. once a week for 3 weeks. Based on the
relative tumor volume, FA-MTX with 1/6 dose of MTX
showed comparable or slightly better efficacy.
Results
Figure 6
Figure 6: Recombinant HSA
fusion proteins promote
apoptosis via caspase
activation. SJSA-1 cells were
plated in 96-well plates in
standard growth media and
allowed to attach overnight.
Recombinant HSA fusion
proteins, FA-p53i or nutlin were
added at the indicated
concentrations in RPMI media
containing 1% FBS + 0.05%
DMSO and allowed to incubate x
24 hrs. Cells were then washed
and caspase activation was
quantitated using a fluorimetric
Homogeneous Caspase Assay
(Roche). Phase micrographs of
10 µM-treated wells: (A)
untreated (B) nutlin (C) FA-p53i
(D) rHSA-p53i (E) rHSA-PMI.
0.00
1.00
2.00
3.00
4.00
5.00
6.00
7.00
8.00
9.00
control
nutlin
10
µM
FA-p53i10
µM
rH
SA-p53i5
µM
rH
SA-p53i10
µM
rH
SA-PM
I5
µM
rH
SA-PM
I10
µM
Treatment Conditions
Foldchangerelativetocontrol
A
ED
CB
Conclusion
FA-modification of MTX and p53i is a valid method to facilitate non-covalent
incorporation into HSA
Recombinant HSA fusion proteins already containing the integrated p53i and PMI
peptides are capable of delivering FA-MTX.
The increase in p53 protein expression by FA-p53i, rHSA-p53i and rHSA-PMI
confirms intracellular uptake and reactivation of p53.
rHSA fusion proteins already containing the integrated p53i and PMI peptides are
capable of promoting apoptosis via caspase activation.
Studies are currently underway to determine if rHSA fusion proteins co-delivered
with FA-MTX can enhance cytotoxicity compared to single agent administration.
Wuyuan Lu et al. JBC, 398: 200-213 (2010)
Recipient of the Joseph B. Schwartz Graduate Student Pharmaceutics Travel Fund Award
AM-12-03777