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SureChEMBL
Open Patent Data Searching
2018/08/02
Misato Sakai / Smartworks inc.
2018/8/2 2018 Smartworks inc / Misato Sakai 1
SureChEMBL
https://www.surechembl.org/search/
2018/8/2 2018 Smartworks inc / Misato Sakai 2
What is SureChEMBL?
• Digital Science, a division of British
publisher McMillan, gathers data from
SureChem, one of its products, at the
European Bioinformatics Institute (EBI), a
division of the European Molecular Biology
Laboratory (EMBL) With public domain
• SureChEMBL is built upon the Claims®
Global Patent Database, a comprehensive
international patent collection provided by
IFI Claims®.
• Although it can be used for free, there are
cases where access is restricted when
attempting to display a lot of records.
2018/8/2 2018 Smartworks inc / Misato Sakai 3
Data Coverage (patent)
(as of August 1, 2018)
Coverage
https://www.surechembl.org/knowledgebase/75969-available-databases
2018/8/2 2018 Smartworks inc / Misato Sakai 4
JP
There is “Fulltext” in the table.
But actually “abstract”?
(PAJ : Patent Abstracts of Japan)
Data Coverage (Chemistry Annotation)
(as of August 1, 2018)
2018/8/2 2018 Smartworks inc / Misato Sakai 5
Chemistry Annotation
特許データ中のテキスト、および イメージデータに対して
注釈を付与している。タイムラグ1か月程度。
Search screen
https://www.surechembl.org/search/
2018/8/2 2018 Smartworks inc / Misato Sakai 6
Searchable by bibliographic data, such as number, date,
classification ... etc.
Structure search can also be read from J-Global download file.
(MOL File. Next page)
Download the chemical structural formula file
(J-Global's MOL file) http://jglobal.jst.go.jp/
2018/8/2 2018 Smartworks inc / Misato Sakai 7
Upload and search chemical structural formula file.
https://www.surechembl.org/search/
2018/8/2 2018 Smartworks inc / Misato Sakai 8
Display of camical compound structure
2018/8/2 2018 Smartworks inc / Misato Sakai 9
Multiple similar structures are displayed. Select the compound of
interest. After "your search running” is displayed, the result
screen is activated.
List display
2018/8/2 2018 Smartworks inc / Misato Sakai 10
The patent is not displayed immediately after transition
from the candidate compound. Select "Patent hits" in the
middle of the screen.It is displayed in full in View all results.
Detailed display 1 (bibliographic data)
2018/8/2 2018 Smartworks inc / Misato Sakai 11
Scroll bar in 2 places.
To display the full text, use
the inner scroll or the page
transition buttons.
Page transition button
Detailed display 2 (patent specification)
2018/8/2 2018 Smartworks inc / Misato Sakai 12
Chemistry Annotation
Other highlight functions
2018/8/2 2018 Smartworks inc / Misato Sakai 13
You can highlight additional additions.
・Terminology related to chemical
substances (not chemistry annotated)·
・Biology related terms
Slide Creator ( Contact)
Smart Works Co., Ltd. CEO / Searcher Ms. Misato Sakai
Email info@1smartworks.com
Blog http://blog.1smartworks.com/
2018/8/2 2018 Smartworks inc / Misato Sakai 14

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SureCHEMBL Open Patent Data Seaching with chemical stracture

  • 1. SureChEMBL Open Patent Data Searching 2018/08/02 Misato Sakai / Smartworks inc. 2018/8/2 2018 Smartworks inc / Misato Sakai 1
  • 3. What is SureChEMBL? • Digital Science, a division of British publisher McMillan, gathers data from SureChem, one of its products, at the European Bioinformatics Institute (EBI), a division of the European Molecular Biology Laboratory (EMBL) With public domain • SureChEMBL is built upon the Claims® Global Patent Database, a comprehensive international patent collection provided by IFI Claims®. • Although it can be used for free, there are cases where access is restricted when attempting to display a lot of records. 2018/8/2 2018 Smartworks inc / Misato Sakai 3
  • 4. Data Coverage (patent) (as of August 1, 2018) Coverage https://www.surechembl.org/knowledgebase/75969-available-databases 2018/8/2 2018 Smartworks inc / Misato Sakai 4 JP There is “Fulltext” in the table. But actually “abstract”? (PAJ : Patent Abstracts of Japan)
  • 5. Data Coverage (Chemistry Annotation) (as of August 1, 2018) 2018/8/2 2018 Smartworks inc / Misato Sakai 5 Chemistry Annotation 特許データ中のテキスト、および イメージデータに対して 注釈を付与している。タイムラグ1か月程度。
  • 6. Search screen https://www.surechembl.org/search/ 2018/8/2 2018 Smartworks inc / Misato Sakai 6 Searchable by bibliographic data, such as number, date, classification ... etc. Structure search can also be read from J-Global download file. (MOL File. Next page)
  • 7. Download the chemical structural formula file (J-Global's MOL file) http://jglobal.jst.go.jp/ 2018/8/2 2018 Smartworks inc / Misato Sakai 7
  • 8. Upload and search chemical structural formula file. https://www.surechembl.org/search/ 2018/8/2 2018 Smartworks inc / Misato Sakai 8
  • 9. Display of camical compound structure 2018/8/2 2018 Smartworks inc / Misato Sakai 9 Multiple similar structures are displayed. Select the compound of interest. After "your search running” is displayed, the result screen is activated.
  • 10. List display 2018/8/2 2018 Smartworks inc / Misato Sakai 10 The patent is not displayed immediately after transition from the candidate compound. Select "Patent hits" in the middle of the screen.It is displayed in full in View all results.
  • 11. Detailed display 1 (bibliographic data) 2018/8/2 2018 Smartworks inc / Misato Sakai 11 Scroll bar in 2 places. To display the full text, use the inner scroll or the page transition buttons. Page transition button
  • 12. Detailed display 2 (patent specification) 2018/8/2 2018 Smartworks inc / Misato Sakai 12 Chemistry Annotation
  • 13. Other highlight functions 2018/8/2 2018 Smartworks inc / Misato Sakai 13 You can highlight additional additions. ・Terminology related to chemical substances (not chemistry annotated)· ・Biology related terms
  • 14. Slide Creator ( Contact) Smart Works Co., Ltd. CEO / Searcher Ms. Misato Sakai Email info@1smartworks.com Blog http://blog.1smartworks.com/ 2018/8/2 2018 Smartworks inc / Misato Sakai 14

Editor's Notes

  1. http://okfn.jp/tag/surechembl/