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Yvonne Perrie et al.
Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde
Lipid nanoparticles:
so much more than a little fat blob
https://marlin-prod.literatumonline.com/cms/attachment/8b7c7a39-61b8-4d7c-b099-d20550408343/fx1_lrg.jpg; http://sitn.hms.harvard.edu/wp-content/uploads/2015/05/Fig-12.png
Nucleic acid vaccines
2 Dec 2020
18 Dec 2020 (US)
Barriers
RNA are generally active in
cytoplasm
DNA must localize to the
nucleus, where gene expression
cassette is transcribed
RNA
• Easily and quickly degraded by RNases
• Highly anionic and hydrophilic, so impairs its cellular uptake.
Ladder
RNA
RNA
+
RNase
https://www.flaticon.com
Delivery
Liposomes and LNPs
RNA
Ionisable lipid
(binds the RNA)
Stabilising lipids
LNPs
Liposomes Aqueous core Bilayer membrane
What we need from a delivery system
Protection
Potency
Controlled biodistribution
Manufacturability
Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375)
Commonly used lipids:
Cationic/ionizable lipids
Apparent pKa
-
6.7
6.4
Bind to the anionic RNA
Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375) ; Kim, J., Jozic, A. & Sahay, G. Naturally Derived Membrane Lipids Impact Nanoparticle-Based Messenger RNA Delivery. Cel. Mol. Bioeng. 13, 463–474 (2020).
https://doi.org/10.1007/s12195-020-00619-y
Combine these with Stabiliser lipids:
0%
25%
50%
75%
100%
Molar
ratio
Pegylated lipid
Ionisable/cationic lipid
Cholesterol
DSPC
DLinMC3DMA
General LNP production method
Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375)
pH adjusted so that the ionisable lipid is cationic and binds to the RNA
Lipids in solvent
mRNA
The pH is then
raised to 7.4,
resulting in the
outside of the LNPs
being neutral.
LNPs
Toroidal mixer
Staggered herringbone mixer
Lipids in
ethanol
Aq phase
Microfluidic production parameters to consider:
Critical Quality Attributes:
Size, PDI
Zeta Potential
Lipid yield
Loading & release profiles
In vivo efficacy
Mixing
ratio
Flow Rate
cLNP iLNP
Cationic Lipid Nanoparticles
DSPC:Chol:DOTAP:DMG-PEG2000
DSPC:Chol:DDAB:DMG-PEG2000
Ionisable Lipid Nanoparticles
DSPC:Chol:DLinMC3DMA:DMG-PEG200
Structural/Helper
lipid
DSPC DMG-PEG2000
DOTAP MC3
Chol
DDAB
Cationic/Ionisable
lipid
Molar%
 Structural lipid: 10
 Cholesterol: 48
 Cationic/Ionisable: 40
 PEG lipid: 2
LNP compositions investigated
Production: mixing ratio and production rate
Lipids in solvents
Aqueous phase
Flow
rate
ratio
1:1
3:1
5:1
Mixing ratio:
A critical process parameter & formulation dependent.
0.0
0.2
0.4
0.6
0.8
1.0
0
200
400
600
800
1000
DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA
PDI
Z-average
(d.nm)
Size (d.nm) PDI
1:1 3:1 5:1
FRR
All ZP values between 0 and + 4 mV
Manufacturing Considerations for the Development of Lipid Nanoparticles Using Microfluidics. Roces CB, Lou G, Jain N, Abraham S, Thomas A, Halbert GW, Perrie Y.
Pharmaceutics 2020, 12(11), 1095;
0.0
0.2
0.4
0.6
0.8
1.0
0
20
40
60
80
100
DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA
PDI
Z-average
(d.nm)
Production: mixing ratio and production rate
Lipids in solvents
Aqueous phase
Flow
rate
ratio
1:1
3:1
5:1
Mixing ratio:
A critical process parameter & formulation dependent.
Lipids in solvents
Aqueous phase
Flow rate
Production speed:
A critical process parameter & formulation dependent.
0.0
0.2
0.4
0.6
0.8
1.0
0
200
400
600
800
1000
DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA
PDI
Z-average
(d.nm)
Size (d.nm) PDI
1:1 3:1 5:1
FRR
5 mL/min 10 mL/min 20 mL/min
TFR
All ZP values between 0 and + 4 mV
Loading is high across lipids and nucleic acids
Range of surrogates can be used for pre-clinical development
0
20
40
60
80
100
DOTAP MC3 DDAB
%
Loading
ionisable/cationic lipid
PolyA ssDNA mRNA
Lipid
choice
Groups of ten BALB/c mice were immunized i.m. on days 0 and 28 with either 1.5 or 0.15 μg of self-
amplifying RNA encoding for rabies G protein encapsulating DOTAP polymeric nanoparticles (NPs), DOTAP
Liposomes or DDA Liposomes and compared with the commercial vaccine Rabipur (1/20 of human dose).
Day 0 Day 28
1.5 or 0.15 μg of self-amplifying RNA encoding for rabies
virus glycoprotein G (SAM-RVG) encapsulated
Day 42
Impact on potency
1. DOTAP cLNPs
2. DDA cLNPs
3. MC3 iLNPs
Immune profiles: cLNP vs iLNP
 No sig difference between iLNPs and DOTAP and DDA-cLNPs
 All promote anti-RVG IgGs above the correlate of protection
two weeks after a single vaccination.
2 weeks after 1st injection
 titers increased up to 20-fold
 no sig. difference between the cLNP and iLNP responses.
2 weeks after 2nd injection
* (sig higher at lower dose)
Biodistribution protocol
IVIS Spectrum In Vivo
Imaging System
Vaccination
Intramuscular
lipid nanoparticles
Biodistribution profiles
DOTAP and DDA cLNP –
different
DOTAP cLNP and iLNP –
similar
Does not give insight into preferred biodistribution
Manufacturing
parameters
Formulation
parameters
Scale-up
Scale-up to GMP
0
20
40
60
80
100
SHM TrM TrM 60 mL/min TrM 200
mL/min (GMP)
Encapsulation
Efficiency
(%)
200
60
12
12
12 200
60
12
12
mL/min mL/min
0
0.2
0.4
0.6
0.8
1
0
20
40
60
80
100
GenVoy-ILM™
(empty)
SHM TrM TrM 60 mL/min TrM 200
mL/min (GMP)
PDI
Z-average
(d.nm)
Size PDI
Summary

PHA-ST-TRAIN-VAC (EU Hoizon2020)
Despo Chatzikleanthous
Giulia Anderluzzi
Gustavo Lou Ramirez
Rob Cunliffe
EPSRC CDT
Cameron Webb
Gillian Berrie
Neil Forbes
KTP (Lamellar Biomedical)
Rachel Donaghey
Micorsun (Innovate UK)
Carla Roces
Independent Research Fund Denmark
Signe Schmidt

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MDC Connects Series 2021 | A Guide to Complex Medicines: Lipid Nanoparticles - So much more than a little fat blob - Yvonne Perrie (University of Strathclyde)

  • 1. Yvonne Perrie et al. Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde Lipid nanoparticles: so much more than a little fat blob
  • 3. Barriers RNA are generally active in cytoplasm DNA must localize to the nucleus, where gene expression cassette is transcribed
  • 4. RNA • Easily and quickly degraded by RNases • Highly anionic and hydrophilic, so impairs its cellular uptake. Ladder RNA RNA + RNase https://www.flaticon.com Delivery
  • 5. Liposomes and LNPs RNA Ionisable lipid (binds the RNA) Stabilising lipids LNPs Liposomes Aqueous core Bilayer membrane
  • 6. What we need from a delivery system Protection Potency Controlled biodistribution Manufacturability
  • 7. Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375) Commonly used lipids: Cationic/ionizable lipids Apparent pKa - 6.7 6.4 Bind to the anionic RNA
  • 8. Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375) ; Kim, J., Jozic, A. & Sahay, G. Naturally Derived Membrane Lipids Impact Nanoparticle-Based Messenger RNA Delivery. Cel. Mol. Bioeng. 13, 463–474 (2020). https://doi.org/10.1007/s12195-020-00619-y Combine these with Stabiliser lipids: 0% 25% 50% 75% 100% Molar ratio Pegylated lipid Ionisable/cationic lipid Cholesterol DSPC DLinMC3DMA
  • 9. General LNP production method Small Methods, Volume: 2, Issue: 9, First published: 26 April 2018, DOI: (10.1002/smtd.201700375) pH adjusted so that the ionisable lipid is cationic and binds to the RNA Lipids in solvent mRNA The pH is then raised to 7.4, resulting in the outside of the LNPs being neutral. LNPs Toroidal mixer Staggered herringbone mixer
  • 10. Lipids in ethanol Aq phase Microfluidic production parameters to consider: Critical Quality Attributes: Size, PDI Zeta Potential Lipid yield Loading & release profiles In vivo efficacy Mixing ratio Flow Rate
  • 11. cLNP iLNP Cationic Lipid Nanoparticles DSPC:Chol:DOTAP:DMG-PEG2000 DSPC:Chol:DDAB:DMG-PEG2000 Ionisable Lipid Nanoparticles DSPC:Chol:DLinMC3DMA:DMG-PEG200 Structural/Helper lipid DSPC DMG-PEG2000 DOTAP MC3 Chol DDAB Cationic/Ionisable lipid Molar%  Structural lipid: 10  Cholesterol: 48  Cationic/Ionisable: 40  PEG lipid: 2 LNP compositions investigated
  • 12. Production: mixing ratio and production rate Lipids in solvents Aqueous phase Flow rate ratio 1:1 3:1 5:1 Mixing ratio: A critical process parameter & formulation dependent. 0.0 0.2 0.4 0.6 0.8 1.0 0 200 400 600 800 1000 DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA PDI Z-average (d.nm) Size (d.nm) PDI 1:1 3:1 5:1 FRR All ZP values between 0 and + 4 mV Manufacturing Considerations for the Development of Lipid Nanoparticles Using Microfluidics. Roces CB, Lou G, Jain N, Abraham S, Thomas A, Halbert GW, Perrie Y. Pharmaceutics 2020, 12(11), 1095;
  • 13. 0.0 0.2 0.4 0.6 0.8 1.0 0 20 40 60 80 100 DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA PDI Z-average (d.nm) Production: mixing ratio and production rate Lipids in solvents Aqueous phase Flow rate ratio 1:1 3:1 5:1 Mixing ratio: A critical process parameter & formulation dependent. Lipids in solvents Aqueous phase Flow rate Production speed: A critical process parameter & formulation dependent. 0.0 0.2 0.4 0.6 0.8 1.0 0 200 400 600 800 1000 DOTAP MC3 DDA DOTAP MC3 DDA DOTAP MC3 DDA PDI Z-average (d.nm) Size (d.nm) PDI 1:1 3:1 5:1 FRR 5 mL/min 10 mL/min 20 mL/min TFR All ZP values between 0 and + 4 mV
  • 14. Loading is high across lipids and nucleic acids Range of surrogates can be used for pre-clinical development 0 20 40 60 80 100 DOTAP MC3 DDAB % Loading ionisable/cationic lipid PolyA ssDNA mRNA Lipid choice
  • 15. Groups of ten BALB/c mice were immunized i.m. on days 0 and 28 with either 1.5 or 0.15 μg of self- amplifying RNA encoding for rabies G protein encapsulating DOTAP polymeric nanoparticles (NPs), DOTAP Liposomes or DDA Liposomes and compared with the commercial vaccine Rabipur (1/20 of human dose). Day 0 Day 28 1.5 or 0.15 μg of self-amplifying RNA encoding for rabies virus glycoprotein G (SAM-RVG) encapsulated Day 42 Impact on potency 1. DOTAP cLNPs 2. DDA cLNPs 3. MC3 iLNPs
  • 16. Immune profiles: cLNP vs iLNP  No sig difference between iLNPs and DOTAP and DDA-cLNPs  All promote anti-RVG IgGs above the correlate of protection two weeks after a single vaccination. 2 weeks after 1st injection  titers increased up to 20-fold  no sig. difference between the cLNP and iLNP responses. 2 weeks after 2nd injection * (sig higher at lower dose)
  • 17. Biodistribution protocol IVIS Spectrum In Vivo Imaging System Vaccination Intramuscular lipid nanoparticles
  • 18. Biodistribution profiles DOTAP and DDA cLNP – different DOTAP cLNP and iLNP – similar Does not give insight into preferred biodistribution
  • 20. Scale-up to GMP 0 20 40 60 80 100 SHM TrM TrM 60 mL/min TrM 200 mL/min (GMP) Encapsulation Efficiency (%) 200 60 12 12 12 200 60 12 12 mL/min mL/min 0 0.2 0.4 0.6 0.8 1 0 20 40 60 80 100 GenVoy-ILM™ (empty) SHM TrM TrM 60 mL/min TrM 200 mL/min (GMP) PDI Z-average (d.nm) Size PDI
  • 21. Summary  PHA-ST-TRAIN-VAC (EU Hoizon2020) Despo Chatzikleanthous Giulia Anderluzzi Gustavo Lou Ramirez Rob Cunliffe EPSRC CDT Cameron Webb Gillian Berrie Neil Forbes KTP (Lamellar Biomedical) Rachel Donaghey Micorsun (Innovate UK) Carla Roces Independent Research Fund Denmark Signe Schmidt