SlideShare a Scribd company logo
1 of 131
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
PowerPoint® Lecture Presentations for
Biology
Eighth Edition
Neil Campbell and Jane Reece
Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp
Chapter 5
The Structure and Function of
Large Biological Molecules
Overview: The Molecules of Life
• All living things are made up of four classes of
large biological molecules: carbohydrates,
lipids, proteins, and nucleic acids
• Within cells, small organic molecules are joined
together to form larger molecules
• Macromolecules are large molecules
composed of thousands of covalently
connected atoms
• Molecular structure and function are
inseparable
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-1
Concept 5.1: Macromolecules are polymers, built
from monomers
• A polymer is a long molecule consisting of
many similar building blocks
• These small building-block molecules are
called monomers
• Three of the four classes of life’s organic
molecules are polymers:
– Carbohydrates
– Proteins
– Nucleic acids
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• A condensation reaction or more specifically
a dehydration reaction occurs when two
monomers bond together through the loss of a
water molecule
• Enzymes are macromolecules that speed up
the dehydration process
• Polymers are disassembled to monomers by
hydrolysis, a reaction that is essentially the
reverse of the dehydration reaction
The Synthesis and Breakdown of Polymers
Animation: Polymers
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-2
Short polymer
HO 1 2 3 H HO H
Unlinked monomer
Dehydration removes a water
molecule, forming a new bond
HO
H2O
H
1 2 3 4
Longer polymer
(a) Dehydration reaction in the synthesis of a polymer
HO 1 2 3 4 H
H2O
Hydrolysis adds a water
molecule, breaking a bond
HO H
H HO
1 2 3
(b) Hydrolysis of a polymer
Fig. 5-2a
Dehydration removes a water
molecule, forming a new bond
Short polymer Unlinked monomer
Longer polymer
Dehydration reaction in the synthesis of a polymer
HO
HO
HO
H2O
H
H
H
4
3
2
1
1 2 3
(a)
Fig. 5-2b
Hydrolysis adds a water
molecule, breaking a bond
Hydrolysis of a polymer
HO
HO HO
H2O
H
H
H
3
2
1
1 2 3 4
(b)
The Diversity of Polymers
• Each cell has thousands of different kinds of
macromolecules
• Macromolecules vary among cells of an
organism, vary more within a species, and vary
even more between species
• An immense variety of polymers can be built
from a small set of monomers
2 3 HO
H
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Concept 5.2: Carbohydrates serve as fuel and
building material
• Carbohydrates include sugars and the
polymers of sugars
• The simplest carbohydrates are
monosaccharides, or single sugars
• Carbohydrate macromolecules are
polysaccharides, polymers composed of many
sugar building blocks
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Sugars
• Monosaccharides have molecular formulas
that are usually multiples of CH2O
• Glucose (C6H12O6) is the most common
monosaccharide
• Monosaccharides are classified by
– The location of the carbonyl group (as aldose
or ketose)
– The number of carbons in the carbon skeleton
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-3
Dihydroxyacetone
Ribulose
Fructose
Glyceraldehyde
Ribose
Glucose Galactose
Hexoses (C6H12O6)
Pentoses (C5H10O5)
Trioses (C3H6O3)
Fig. 5-3a
Glyceraldehyde
Ribose
Glucose Galactose
Hexoses (C6H12O6)
Pentoses (C5H10O5)
Trioses (C3H6O3)
Fig. 5-3b
Dihydroxyacetone
Ribulose
Fructose
Hexoses (C6H12O6)
Pentoses (C5H10O5)
Trioses (C3H6O3)
• Though often drawn as linear skeletons, in
aqueous solutions many sugars form rings
• Monosaccharides serve as a major fuel for
cells and as raw material for building molecules
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-4
(a) Linear and ring forms (b) Abbreviated ring structure
Fig. 5-4a
(a) Linear and ring forms
Fig. 5-4b
(b) Abbreviated ring structure
• A disaccharide is formed when a dehydration
reaction joins two monosaccharides
• This covalent bond is called a glycosidic
linkage
Animation: Disaccharides
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-5
(b) Dehydration reaction in the synthesis of sucrose
Glucose Fructose Sucrose
Maltose
Glucose
Glucose
(a) Dehydration reaction in the synthesis of maltose
1–4
glycosidic
linkage
1–2
glycosidic
linkage
Polysaccharides
• Polysaccharides, the polymers of sugars,
have storage and structural roles
• The structure and function of a polysaccharide
are determined by its sugar monomers and the
positions of glycosidic linkages
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Storage Polysaccharides
• Starch, a storage polysaccharide of plants,
consists entirely of glucose monomers
• Plants store surplus starch as granules within
chloroplasts and other plastids
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-6
(b) Glycogen: an animal polysaccharide
Starch
Glycogen
Amylose
Chloroplast
(a) Starch: a plant polysaccharide
Amylopectin
Mitochondria Glycogen granules
0.5 µm
1 µm
• Glycogen is a storage polysaccharide in
animals
• Humans and other vertebrates store glycogen
mainly in liver and muscle cells
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Structural Polysaccharides
• The polysaccharide cellulose is a major
component of the tough wall of plant cells
• Like starch, cellulose is a polymer of glucose,
but the glycosidic linkages differ
• The difference is based on two ring forms for
glucose: alpha () and beta ()
Animation: Polysaccharides
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-7
(a) and glucose
ring structures
Glucose Glucose
(b) Starch: 1–4 linkage of glucose monomers (b) Cellulose: 1–4 linkage of glucose monomers
Fig. 5-7a
(a) and glucose ring structures
Glucose Glucose
Fig. 5-7bc
(b) Starch: 1–4 linkage of glucose monomers
(c) Cellulose: 1–4 linkage of glucose monomers
• Polymers with  glucose are helical
• Polymers with  glucose are straight
• In straight structures, H atoms on one
strand can bond with OH groups on other
strands
• Parallel cellulose molecules held together
this way are grouped into microfibrils, which
form strong building materials for plants
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-8
b Glucose
monomer
Cellulose
molecules
Microfibril
Cellulose
microfibrils
in a plant
cell wall
0.5 µm
10 µm
Cell walls
• Enzymes that digest starch by hydrolyzing 
linkages can’t hydrolyze  linkages in cellulose
• Cellulose in human food passes through the
digestive tract as insoluble fiber
• Some microbes use enzymes to digest
cellulose
• Many herbivores, from cows to termites, have
symbiotic relationships with these microbes
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-9
• Chitin, another structural polysaccharide, is
found in the exoskeleton of arthropods
• Chitin also provides structural support for the
cell walls of many fungi
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-10
The structure
of the chitin
monomer.
(a) (b) (c)
Chitin forms the
exoskeleton of
arthropods.
Chitin is used to make
a strong and flexible
surgical thread.
Concept 5.3: Lipids are a diverse group of
hydrophobic molecules
• Lipids are the one class of large biological
molecules that do not form polymers
• The unifying feature of lipids is having little or
no affinity for water
• Lipids are hydrophobic because they consist
mostly of hydrocarbons, which form nonpolar
covalent bonds
• The most biologically important lipids are fats,
phospholipids, and steroids
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fats
• Fats are constructed from two types of smaller
molecules: glycerol and fatty acids
• Glycerol is a three-carbon alcohol with a
hydroxyl group attached to each carbon
• A fatty acid consists of a carboxyl group
attached to a long carbon skeleton
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-11
Fatty acid
(palmitic acid)
Glycerol
(a) Dehydration reaction in the synthesis of a fat
Ester linkage
(b) Fat molecule (triacylglycerol)
Fig. 5-11a
Fatty acid
(palmitic acid)
(a) Dehydration reaction in the synthesis of a fat
Glycerol
Fig. 5-11b
(b) Fat molecule (triacylglycerol)
Ester linkage
• Fats separate from water because
water molecules form hydrogen bonds
with each other and exclude the fats
• In a fat, three fatty acids are joined to
glycerol by an ester linkage, creating a
triacylglycerol, or triglyceride
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• Fatty acids vary in length (number of carbons)
and in the number and locations of double
bonds
• Saturated fatty acids have the maximum
number of hydrogen atoms possible and no
double bonds
• Unsaturated fatty acids have one or more
double bonds
Animation: Fats
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-12
Structural
formula of a
saturated fat
molecule
Stearic acid, a
saturated fatty
acid
(a) Saturated fat
Structural formula
of an unsaturated
fat molecule
Oleic acid, an
unsaturated
fatty acid
(b) Unsaturated fat
cis double
bond causes
bending
Fig. 5-12a
(a) Saturated fat
Structural
formula of a
saturated fat
molecule
Stearic acid, a
saturated fatty
acid
Fig. 5-12b
(b) Unsaturated fat
Structural formula
of an unsaturated
fat molecule
Oleic acid, an
unsaturated
fatty acid
cis double
bond causes
bending
• Fats made from saturated fatty acids are called
saturated fats, and are solid at room
temperature
• Most animal fats are saturated
• Fats made from unsaturated fatty acids are
called unsaturated fats or oils, and are liquid at
room temperature
• Plant fats and fish fats are usually unsaturated
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• A diet rich in saturated fats may contribute to
cardiovascular disease through plaque deposits
• Hydrogenation is the process of converting
unsaturated fats to saturated fats by adding
hydrogen
• Hydrogenating vegetable oils also creates
unsaturated fats with trans double bonds
• These trans fats may contribute more than
saturated fats to cardiovascular disease
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• The major function of fats is energy storage
• Humans and other mammals store their fat in
adipose cells
• Adipose tissue also cushions vital organs and
insulates the body
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Phospholipids
• In a phospholipid, two fatty acids and a
phosphate group are attached to glycerol
• The two fatty acid tails are hydrophobic, but the
phosphate group and its attachments form a
hydrophilic head
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-13
(b) Space-filling model
(a) (c)
Structural formula Phospholipid symbol
Fatty acids
Hydrophilic
head
Hydrophobic
tails
Choline
Phosphate
Glycerol
Hydrophobic
tails
Hydrophilic
head
Fig. 5-13ab
(b) Space-filling model
(a) Structural formula
Fatty acids
Choline
Phosphate
Glycerol
Hydrophobic
tails
Hydrophilic
head
• When phospholipids are added to water, they
self-assemble into a bilayer, with the
hydrophobic tails pointing toward the interior
• The structure of phospholipids results in a
bilayer arrangement found in cell membranes
• Phospholipids are the major component of all
cell membranes
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-14
Hydrophilic
head
Hydrophobic
tail WATER
WATER
Steroids
• Steroids are lipids characterized by a carbon
skeleton consisting of four fused rings
• Cholesterol, an important steroid, is a
component in animal cell membranes
• Although cholesterol is essential in animals,
high levels in the blood may contribute to
cardiovascular disease
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-15
Concept 5.4: Proteins have many structures,
resulting in a wide range of functions
• Proteins account for more than 50% of the dry
mass of most cells
• Protein functions include structural support,
storage, transport, cellular communications,
movement, and defense against foreign
substances
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Table 5-1
Animation: Structural Proteins
Animation: Storage Proteins
Animation: Transport Proteins
Animation: Receptor Proteins
Animation: Contractile Proteins
Animation: Defensive Proteins
Animation: Hormonal Proteins
Animation: Sensory Proteins
Animation: Gene Regulatory Proteins
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• Enzymes are a type of protein that acts as a
catalyst to speed up chemical reactions
• Enzymes can perform their functions
repeatedly, functioning as workhorses that
carry out the processes of life
Animation: Enzymes
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-16
Enzyme
(sucrase)
Substrate
(sucrose)
Fructose
Glucose
OH
HO
H2O
Polypeptides
• Polypeptides are polymers built from the
same set of 20 amino acids
• A protein consists of one or more polypeptides
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Amino Acid Monomers
• Amino acids are organic molecules with
carboxyl and amino groups
• Amino acids differ in their properties due to
differing side chains, called R groups
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-UN1
Amino
group
Carboxyl
group
carbon
Fig. 5-17
Nonpolar
Glycine
(Gly or G)
Alanine
(Ala or A)
Valine
(Val or V)
Leucine
(Leu or L)
Isoleucine
(Ile or I)
Methionine
(Met or M)
Phenylalanine
(Phe or F)
Trypotphan
(Trp or W)
Proline
(Pro or P)
Polar
Serine
(Ser or S)
Threonine
(Thr or T)
Cysteine
(Cys or C)
Tyrosine
(Tyr or Y)
Asparagine
(Asn or N)
Glutamine
(Gln or Q)
Electrically
charged
Acidic Basic
Aspartic acid
(Asp or D)
Glutamic acid
(Glu or E)
Lysine
(Lys or K)
Arginine
(Arg or R)
Histidine
(His or H)
Fig. 5-17a
Nonpolar
Glycine
(Gly or G)
Alanine
(Ala or A)
Valine
(Val or V)
Leucine
(Leu or L)
Isoleucine
(Ile or I)
Methionine
(Met or M)
Phenylalanine
(Phe or F)
Tryptophan
(Trp or W)
Proline
(Pro or P)
Fig. 5-17b
Polar
Asparagine
(Asn or N)
Glutamine
(Gln or Q)
Serine
(Ser or S)
Threonine
(Thr or T)
Cysteine
(Cys or C)
Tyrosine
(Tyr or Y)
Fig. 5-17c
Acidic
Arginine
(Arg or R)
Histidine
(His or H)
Aspartic acid
(Asp or D)
Glutamic acid
(Glu or E)
Lysine
(Lys or K)
Basic
Electrically
charged
Amino Acid Polymers
• Amino acids are linked by peptide bonds
• A polypeptide is a polymer of amino acids
• Polypeptides range in length from a few to
more than a thousand monomers
• Each polypeptide has a unique linear sequence
of amino acids
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Peptide
bond
Fig. 5-18
Amino end
(N-terminus)
Peptide
bond
Side chains
Backbone
Carboxyl end
(C-terminus)
(a)
(b)
Protein Structure and Function
• A functional protein consists of one or more
polypeptides twisted, folded, and coiled into a
unique shape
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-19
A ribbon model of lysozyme
(a) (b) A space-filling model of lysozyme
Groove
Groove
Fig. 5-19a
A ribbon model of lysozyme
(a)
Groove
Fig. 5-19b
(b) A space-filling model of lysozyme
Groove
• The sequence of amino acids determines a
protein’s three-dimensional structure
• A protein’s structure determines its function
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-20
Antibody protein Protein from flu virus
Four Levels of Protein Structure
• The primary structure of a protein is its unique
sequence of amino acids
• Secondary structure, found in most proteins,
consists of coils and folds in the polypeptide
chain
• Tertiary structure is determined by interactions
among various side chains (R groups)
• Quaternary structure results when a protein
consists of multiple polypeptide chains
Animation: Protein Structure Introduction
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
• Primary structure, the sequence of amino
acids in a protein, is like the order of letters in a
long word
• Primary structure is determined by inherited
genetic information
Animation: Primary Protein Structure
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-21
Primary
Structure
Secondary
Structure
Tertiary
Structure
pleated sheet
Examples of
amino acid
subunits
+H3N
Amino end
helix
Quaternary
Structure
Fig. 5-21a
Amino acid
subunits
+H3N
Amino end
25
20
15
10
5
1
Primary Structure
Fig. 5-21b
Amino acid
subunits
+H3N
Amino end
Carboxyl end
125
120
115
110
105
100
95
90
85
80
75
20
25
15
10
5
1
• The coils and folds of secondary structure
result from hydrogen bonds between repeating
constituents of the polypeptide backbone
• Typical secondary structures are a coil called
an  helix and a folded structure called a 
pleated sheet
Animation: Secondary Protein Structure
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-21c
Secondary Structure
pleated sheet
Examples of
amino acid
subunits
helix
Fig. 5-21d
Abdominal glands of the
spider secrete silk fibers
made of a structural protein
containing pleated sheets.
The radiating strands, made
of dry silk fibers, maintain
the shape of the web.
The spiral strands (capture
strands) are elastic, stretching
in response to wind, rain,
and the touch of insects.
• Tertiary structure is determined by
interactions between R groups, rather than
interactions between backbone constituents
• These interactions between R groups include
hydrogen bonds, ionic bonds, hydrophobic
interactions, and van der Waals interactions
• Strong covalent bonds called disulfide
bridges may reinforce the protein’s structure
Animation: Tertiary Protein Structure
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-21e
Tertiary Structure Quaternary Structure
Fig. 5-21f
Polypeptide
backbone
Hydrophobic
interactions and
van der Waals
interactions
Disulfide bridge
Ionic bond
Hydrogen
bond
Fig. 5-21g
Polypeptide
chain
Chains
Heme
Iron
Chains
Collagen
Hemoglobin
• Quaternary structure results when two or
more polypeptide chains form one
macromolecule
• Collagen is a fibrous protein consisting of three
polypeptides coiled like a rope
• Hemoglobin is a globular protein consisting of
four polypeptides: two alpha and two beta
chains
Animation: Quaternary Protein Structure
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Sickle-Cell Disease: A Change in
Primary Structure
• A slight change in primary structure can affect
a protein’s structure and ability to function
• Sickle-cell disease, an inherited blood disorder,
results from a single amino acid substitution in
the protein hemoglobin
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-22
Primary
structure
Secondary
and tertiary
structures
Quaternary
structure
Normal
hemoglobin
(top view)
Primary
structure
Secondary
and tertiary
structures
Quaternary
structure
Function Function
subunit
Molecules do
not associate
with one
another; each
carries oxygen.
Red blood
cell shape
Normal red blood
cells are full of
individual
hemoglobin
moledules, each
carrying oxygen.
10 µm
Normal hemoglobin
1 2 3 4 5 6 7
Val His LeuThr Pro Glu Glu
Red blood
cell shape
subunit
Exposed
hydrophobic
region
Sickle-cell
hemoglobin
Molecules
interact with
one another and
crystallize into
a fiber; capacity
to carry oxygen
is greatly reduced.
Fibers of abnormal
hemoglobin deform
red blood cell into
sickle shape.
10 µm
Sickle-cell hemoglobin
Glu
Pro
Thr
Leu
His
Val Val
1 2 3 4 5 6 7
Fig. 5-22a
Primary
structure
Secondary
and tertiary
structures
Function
Quaternary
structure
Molecules do
not associate
with one
another; each
carries oxygen.
Normal
hemoglobin
(top view)
subunit
Normal hemoglobin
7
6
5
4
3
2
1
Glu
Val His Leu Thr Pro Glu
Fig. 5-22b
Primary
structure
Secondary
and tertiary
structures
Function
Quaternary
structure
Molecules
interact with
one another and
crystallize into
a fiber; capacity
to carry oxygen
is greatly reduced.
Sickle-cell
hemoglobin
subunit
Sickle-cell hemoglobin
7
6
5
4
3
2
1
Val
Val His Leu Thr Pro Glu
Exposed
hydrophobic
region
Fig. 5-22c
Normal red blood
cells are full of
individual
hemoglobin
molecules, each
carrying oxygen.
Fibers of abnormal
hemoglobin deform
red blood cell into
sickle shape.
10 µm 10 µm
What Determines Protein Structure?
• In addition to primary structure, physical and
chemical conditions can affect structure
• Alterations in pH, salt concentration,
temperature, or other environmental factors
can cause a protein to unravel
• This loss of a protein’s native structure is called
denaturation
• A denatured protein is biologically inactive
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-23
Normal protein Denatured protein
Denaturation
Renaturation
Protein Folding in the Cell
• It is hard to predict a protein’s structure from its
primary structure
• Most proteins probably go through several
states on their way to a stable structure
• Chaperonins are protein molecules that assist
the proper folding of other proteins
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-24
Hollow
cylinder
Cap
Chaperonin
(fully assembled)
Polypeptide
Steps of Chaperonin
Action:
An unfolded poly-
peptide enters the
cylinder from one end.
1
2 3
The cap attaches, causing the
cylinder to change shape in
such a way that it creates a
hydrophilic environment for
the folding of the polypeptide.
The cap comes
off, and the properly
folded protein is
released.
Correctly
folded
protein
Fig. 5-24a
Hollow
cylinder
Chaperonin
(fully assembled)
Cap
Fig. 5-24b
Correctly
folded
protein
Polypeptide
Steps of Chaperonin
Action:
1
2
An unfolded poly-
peptide enters the
cylinder from one end.
The cap attaches, causing the
cylinder to change shape in
such a way that it creates a
hydrophilic environment for
the folding of the polypeptide.
The cap comes
off, and the properly
folded protein is
released.
3
• Scientists use X-ray crystallography to
determine a protein’s structure
• Another method is nuclear magnetic resonance
(NMR) spectroscopy, which does not require
protein crystallization
• Bioinformatics uses computer programs to
predict protein structure from amino acid
sequences
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-25
EXPERIMENT
RESULTS
X-ray
source X-ray
beam
Diffracted
X-rays
Crystal Digital detector X-ray diffraction
pattern
RNA
polymerase II
RNA
DNA
Fig. 5-25a
Diffracted
X-rays
EXPERIMENT
X-ray
source X-ray
beam
Crystal Digital detector X-ray diffraction
pattern
Fig. 5-25b
RESULTS
RNA
RNA
polymerase II
DNA
Concept 5.5: Nucleic acids store and transmit
hereditary information
• The amino acid sequence of a polypeptide is
programmed by a unit of inheritance called a
gene
• Genes are made of DNA, a nucleic acid
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
The Roles of Nucleic Acids
• There are two types of nucleic acids:
– Deoxyribonucleic acid (DNA)
– Ribonucleic acid (RNA)
• DNA provides directions for its own replication
• DNA directs synthesis of messenger RNA
(mRNA) and, through mRNA, controls protein
synthesis
• Protein synthesis occurs in ribosomes
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-26-1
mRNA
Synthesis of
mRNA in the
nucleus
DNA
NUCLEUS
CYTOPLASM
1
Fig. 5-26-2
mRNA
Synthesis of
mRNA in the
nucleus
DNA
NUCLEUS
mRNA
CYTOPLASM
Movement of
mRNA into cytoplasm
via nuclear pore
1
2
Fig. 5-26-3
mRNA
Synthesis of
mRNA in the
nucleus
DNA
NUCLEUS
mRNA
CYTOPLASM
Movement of
mRNA into cytoplasm
via nuclear pore
Ribosome
Amino
acids
Polypeptide
Synthesis
of protein
1
2
3
The Structure of Nucleic Acids
• Nucleic acids are polymers called
polynucleotides
• Each polynucleotide is made of monomers
called nucleotides
• Each nucleotide consists of a nitrogenous
base, a pentose sugar, and a phosphate group
• The portion of a nucleotide without the
phosphate group is called a nucleoside
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-27
5 end
Nucleoside
Nitrogenous
base
Phosphate
group Sugar
(pentose)
(b) Nucleotide
(a) Polynucleotide, or nucleic acid
3 end
3 C
3 C
5 C
5 C
Nitrogenous bases
Pyrimidines
Cytosine (C) Thymine (T, in DNA) Uracil (U, in RNA)
Purines
Adenine (A) Guanine (G)
Sugars
Deoxyribose (in DNA) Ribose (in RNA)
(c) Nucleoside components: sugars
Fig. 5-27ab
5' end
5'C
3'C
5'C
3'C
3' end
(a) Polynucleotide, or nucleic acid
(b) Nucleotide
Nucleoside
Nitrogenous
base
3'C
5'C
Phosphate
group Sugar
(pentose)
Fig. 5-27c-1
(c) Nucleoside components: nitrogenous bases
Purines
Guanine (G)
Adenine (A)
Cytosine (C) Thymine (T, in DNA) Uracil (U, in RNA)
Nitrogenous bases
Pyrimidines
Fig. 5-27c-2
Ribose (in RNA)
Deoxyribose (in DNA)
Sugars
(c) Nucleoside components: sugars
Nucleotide Monomers
• Nucleoside = nitrogenous base + sugar
• There are two families of nitrogenous bases:
– Pyrimidines (cytosine, thymine, and uracil)
have a single six-membered ring
– Purines (adenine and guanine) have a six-
membered ring fused to a five-membered ring
• In DNA, the sugar is deoxyribose; in RNA, the
sugar is ribose
• Nucleotide = nucleoside + phosphate group
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Nucleotide Polymers
• Nucleotide polymers are linked together to build
a polynucleotide
• Adjacent nucleotides are joined by covalent
bonds that form between the –OH group on the
3 carbon of one nucleotide and the phosphate
on the 5 carbon on the next
• These links create a backbone of sugar-
phosphate units with nitrogenous bases as
appendages
• The sequence of bases along a DNA or mRNA
polymer is unique for each gene
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
The DNA Double Helix
• A DNA molecule has two polynucleotides spiraling
around an imaginary axis, forming a double helix
• In the DNA double helix, the two backbones run in
opposite 5 → 3 directions from each other, an
arrangement referred to as antiparallel
• One DNA molecule includes many genes
• The nitrogenous bases in DNA pair up and form
hydrogen bonds: adenine (A) always with thymine
(T), and guanine (G) always with cytosine (C)
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-28
Sugar-phosphate
backbones
3' end
3' end
3' end
3' end
5' end
5' end
5' end
5' end
Base pair (joined by
hydrogen bonding)
Old strands
New
strands
Nucleotide
about to be
added to a
new strand
DNA and Proteins as Tape Measures of Evolution
• The linear sequences of nucleotides in DNA
molecules are passed from parents to offspring
• Two closely related species are more similar in
DNA than are more distantly related species
• Molecular biology can be used to assess
evolutionary kinship
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
The Theme of Emergent Properties in the
Chemistry of Life: A Review
• Higher levels of organization result in the
emergence of new properties
• Organization is the key to the chemistry of life
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
Fig. 5-UN2
Fig. 5-UN2a
Fig. 5-UN2b
Fig. 5-UN3
Fig. 5-UN4
Fig. 5-UN5
Fig. 5-UN6
Fig. 5-UN7
Fig. 5-UN8
Fig. 5-UN9
Fig. 5-UN10
You should now be able to:
1. List and describe the four major classes of
molecules
2. Describe the formation of a glycosidic linkage
and distinguish between monosaccharides,
disaccharides, and polysaccharides
3. Distinguish between saturated and
unsaturated fats and between cis and trans fat
molecules
4. Describe the four levels of protein structure
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
You should now be able to:
5. Distinguish between the following pairs:
pyrimidine and purine, nucleotide and
nucleoside, ribose and deoxyribose, the 5
end and 3 end of a nucleotide
Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings

More Related Content

Similar to 05_Lecture_Presentation.ppt

05lecturepresentation 101003130501-phpapp02
05lecturepresentation 101003130501-phpapp0205lecturepresentation 101003130501-phpapp02
05lecturepresentation 101003130501-phpapp02Cleophas Rwemera
 
14 04-2018 084815182 05-lecture_presentation
14 04-2018 084815182 05-lecture_presentation14 04-2018 084815182 05-lecture_presentation
14 04-2018 084815182 05-lecture_presentationYazeed Samara
 
B.tech biotech i bls u 3 building blocks of life
B.tech biotech i bls u 3 building blocks of lifeB.tech biotech i bls u 3 building blocks of life
B.tech biotech i bls u 3 building blocks of lifeRai University
 
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp0105thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01Cleophas Rwemera
 
1 05 lecture presentation_pc 2018 manal 1 %281%29
1 05 lecture presentation_pc 2018   manal 1 %281%291 05 lecture presentation_pc 2018   manal 1 %281%29
1 05 lecture presentation_pc 2018 manal 1 %281%29Ezz Aldeen Obaid
 
Bio Chapter 5: Macromolecules
Bio Chapter 5: MacromoleculesBio Chapter 5: Macromolecules
Bio Chapter 5: MacromoleculesAngel Vega
 
Biochapter5 macromolecules-151125141437-lva1-app6892
Biochapter5 macromolecules-151125141437-lva1-app6892Biochapter5 macromolecules-151125141437-lva1-app6892
Biochapter5 macromolecules-151125141437-lva1-app6892Cleophas Rwemera
 
05 the structure and function of large biological molecules
05 the structure and function of large biological molecules05 the structure and function of large biological molecules
05 the structure and function of large biological moleculeskindarspirit
 
Module I_6_Structure and Function of Macromolecules.ppt
Module I_6_Structure and Function of Macromolecules.pptModule I_6_Structure and Function of Macromolecules.ppt
Module I_6_Structure and Function of Macromolecules.pptpk2003158
 
03 lecture_presentation
 03 lecture_presentation 03 lecture_presentation
03 lecture_presentationpetersbiology
 
Moleculesof life
Moleculesof lifeMoleculesof life
Moleculesof lifen_bean1973
 
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...MarjorieJenkins1
 
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...MarjorieJenkins1
 
05 Lecture BIOL 1010-30 Gillette College
05 Lecture BIOL 1010-30 Gillette College05 Lecture BIOL 1010-30 Gillette College
05 Lecture BIOL 1010-30 Gillette Collegedeskam2
 
Macro mols - carbohydrates lesson
Macro mols - carbohydrates lessonMacro mols - carbohydrates lesson
Macro mols - carbohydrates lessonmrglosterscience
 

Similar to 05_Lecture_Presentation.ppt (20)

05lecturepresentation 101003130501-phpapp02
05lecturepresentation 101003130501-phpapp0205lecturepresentation 101003130501-phpapp02
05lecturepresentation 101003130501-phpapp02
 
Cells
CellsCells
Cells
 
14 04-2018 084815182 05-lecture_presentation
14 04-2018 084815182 05-lecture_presentation14 04-2018 084815182 05-lecture_presentation
14 04-2018 084815182 05-lecture_presentation
 
Macromolecules
MacromoleculesMacromolecules
Macromolecules
 
B.tech biotech i bls u 3 building blocks of life
B.tech biotech i bls u 3 building blocks of lifeB.tech biotech i bls u 3 building blocks of life
B.tech biotech i bls u 3 building blocks of life
 
Bio Ch 5 Pwpt
Bio  Ch 5 PwptBio  Ch 5 Pwpt
Bio Ch 5 Pwpt
 
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp0105thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01
05thestructureandfunctionoflargebiologicalmolecules 130311053304-phpapp01
 
1 05 lecture presentation_pc 2018 manal 1 %281%29
1 05 lecture presentation_pc 2018   manal 1 %281%291 05 lecture presentation_pc 2018   manal 1 %281%29
1 05 lecture presentation_pc 2018 manal 1 %281%29
 
Bio Chapter 5: Macromolecules
Bio Chapter 5: MacromoleculesBio Chapter 5: Macromolecules
Bio Chapter 5: Macromolecules
 
Biochapter5 macromolecules-151125141437-lva1-app6892
Biochapter5 macromolecules-151125141437-lva1-app6892Biochapter5 macromolecules-151125141437-lva1-app6892
Biochapter5 macromolecules-151125141437-lva1-app6892
 
05 the structure and function of large biological molecules
05 the structure and function of large biological molecules05 the structure and function of large biological molecules
05 the structure and function of large biological molecules
 
Module I_6_Structure and Function of Macromolecules.ppt
Module I_6_Structure and Function of Macromolecules.pptModule I_6_Structure and Function of Macromolecules.ppt
Module I_6_Structure and Function of Macromolecules.ppt
 
Biomolecules macromolecules
Biomolecules macromoleculesBiomolecules macromolecules
Biomolecules macromolecules
 
03 lecture_presentation
 03 lecture_presentation 03 lecture_presentation
03 lecture_presentation
 
Moleculesof life
Moleculesof lifeMoleculesof life
Moleculesof life
 
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
 
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
WCCCD - BIO 155 POWERPOINT on Ch 3 The Chemical Building Blocks of Life Part ...
 
05 Lecture BIOL 1010-30 Gillette College
05 Lecture BIOL 1010-30 Gillette College05 Lecture BIOL 1010-30 Gillette College
05 Lecture BIOL 1010-30 Gillette College
 
Macro mols - carbohydrates lesson
Macro mols - carbohydrates lessonMacro mols - carbohydrates lesson
Macro mols - carbohydrates lesson
 
Biochem
BiochemBiochem
Biochem
 

Recently uploaded

“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...
“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...
“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...Marc Dusseiller Dusjagr
 
Solving Puzzles Benefits Everyone (English).pptx
Solving Puzzles Benefits Everyone (English).pptxSolving Puzzles Benefits Everyone (English).pptx
Solving Puzzles Benefits Everyone (English).pptxOH TEIK BIN
 
MARGINALIZATION (Different learners in Marginalized Group
MARGINALIZATION (Different learners in Marginalized GroupMARGINALIZATION (Different learners in Marginalized Group
MARGINALIZATION (Different learners in Marginalized GroupJonathanParaisoCruz
 
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptx
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptxECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptx
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptxiammrhaywood
 
Final demo Grade 9 for demo Plan dessert.pptx
Final demo Grade 9 for demo Plan dessert.pptxFinal demo Grade 9 for demo Plan dessert.pptx
Final demo Grade 9 for demo Plan dessert.pptxAvyJaneVismanos
 
Hierarchy of management that covers different levels of management
Hierarchy of management that covers different levels of managementHierarchy of management that covers different levels of management
Hierarchy of management that covers different levels of managementmkooblal
 
CELL CYCLE Division Science 8 quarter IV.pptx
CELL CYCLE Division Science 8 quarter IV.pptxCELL CYCLE Division Science 8 quarter IV.pptx
CELL CYCLE Division Science 8 quarter IV.pptxJiesonDelaCerna
 
भारत-रोम व्यापार.pptx, Indo-Roman Trade,
भारत-रोम व्यापार.pptx, Indo-Roman Trade,भारत-रोम व्यापार.pptx, Indo-Roman Trade,
भारत-रोम व्यापार.pptx, Indo-Roman Trade,Virag Sontakke
 
Computed Fields and api Depends in the Odoo 17
Computed Fields and api Depends in the Odoo 17Computed Fields and api Depends in the Odoo 17
Computed Fields and api Depends in the Odoo 17Celine George
 
How to Configure Email Server in Odoo 17
How to Configure Email Server in Odoo 17How to Configure Email Server in Odoo 17
How to Configure Email Server in Odoo 17Celine George
 
Employee wellbeing at the workplace.pptx
Employee wellbeing at the workplace.pptxEmployee wellbeing at the workplace.pptx
Employee wellbeing at the workplace.pptxNirmalaLoungPoorunde1
 
Pharmacognosy Flower 3. Compositae 2023.pdf
Pharmacognosy Flower 3. Compositae 2023.pdfPharmacognosy Flower 3. Compositae 2023.pdf
Pharmacognosy Flower 3. Compositae 2023.pdfMahmoud M. Sallam
 
Introduction to AI in Higher Education_draft.pptx
Introduction to AI in Higher Education_draft.pptxIntroduction to AI in Higher Education_draft.pptx
Introduction to AI in Higher Education_draft.pptxpboyjonauth
 
Painted Grey Ware.pptx, PGW Culture of India
Painted Grey Ware.pptx, PGW Culture of IndiaPainted Grey Ware.pptx, PGW Culture of India
Painted Grey Ware.pptx, PGW Culture of IndiaVirag Sontakke
 
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️9953056974 Low Rate Call Girls In Saket, Delhi NCR
 
Interactive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationInteractive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationnomboosow
 
EPANDING THE CONTENT OF AN OUTLINE using notes.pptx
EPANDING THE CONTENT OF AN OUTLINE using notes.pptxEPANDING THE CONTENT OF AN OUTLINE using notes.pptx
EPANDING THE CONTENT OF AN OUTLINE using notes.pptxRaymartEstabillo3
 
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPT
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPTECONOMIC CONTEXT - LONG FORM TV DRAMA - PPT
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPTiammrhaywood
 

Recently uploaded (20)

“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...
“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...
“Oh GOSH! Reflecting on Hackteria's Collaborative Practices in a Global Do-It...
 
Solving Puzzles Benefits Everyone (English).pptx
Solving Puzzles Benefits Everyone (English).pptxSolving Puzzles Benefits Everyone (English).pptx
Solving Puzzles Benefits Everyone (English).pptx
 
MARGINALIZATION (Different learners in Marginalized Group
MARGINALIZATION (Different learners in Marginalized GroupMARGINALIZATION (Different learners in Marginalized Group
MARGINALIZATION (Different learners in Marginalized Group
 
OS-operating systems- ch04 (Threads) ...
OS-operating systems- ch04 (Threads) ...OS-operating systems- ch04 (Threads) ...
OS-operating systems- ch04 (Threads) ...
 
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptx
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptxECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptx
ECONOMIC CONTEXT - PAPER 1 Q3: NEWSPAPERS.pptx
 
Final demo Grade 9 for demo Plan dessert.pptx
Final demo Grade 9 for demo Plan dessert.pptxFinal demo Grade 9 for demo Plan dessert.pptx
Final demo Grade 9 for demo Plan dessert.pptx
 
Hierarchy of management that covers different levels of management
Hierarchy of management that covers different levels of managementHierarchy of management that covers different levels of management
Hierarchy of management that covers different levels of management
 
CELL CYCLE Division Science 8 quarter IV.pptx
CELL CYCLE Division Science 8 quarter IV.pptxCELL CYCLE Division Science 8 quarter IV.pptx
CELL CYCLE Division Science 8 quarter IV.pptx
 
भारत-रोम व्यापार.pptx, Indo-Roman Trade,
भारत-रोम व्यापार.pptx, Indo-Roman Trade,भारत-रोम व्यापार.pptx, Indo-Roman Trade,
भारत-रोम व्यापार.pptx, Indo-Roman Trade,
 
Computed Fields and api Depends in the Odoo 17
Computed Fields and api Depends in the Odoo 17Computed Fields and api Depends in the Odoo 17
Computed Fields and api Depends in the Odoo 17
 
How to Configure Email Server in Odoo 17
How to Configure Email Server in Odoo 17How to Configure Email Server in Odoo 17
How to Configure Email Server in Odoo 17
 
Employee wellbeing at the workplace.pptx
Employee wellbeing at the workplace.pptxEmployee wellbeing at the workplace.pptx
Employee wellbeing at the workplace.pptx
 
Pharmacognosy Flower 3. Compositae 2023.pdf
Pharmacognosy Flower 3. Compositae 2023.pdfPharmacognosy Flower 3. Compositae 2023.pdf
Pharmacognosy Flower 3. Compositae 2023.pdf
 
Introduction to AI in Higher Education_draft.pptx
Introduction to AI in Higher Education_draft.pptxIntroduction to AI in Higher Education_draft.pptx
Introduction to AI in Higher Education_draft.pptx
 
Painted Grey Ware.pptx, PGW Culture of India
Painted Grey Ware.pptx, PGW Culture of IndiaPainted Grey Ware.pptx, PGW Culture of India
Painted Grey Ware.pptx, PGW Culture of India
 
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️
call girls in Kamla Market (DELHI) 🔝 >༒9953330565🔝 genuine Escort Service 🔝✔️✔️
 
Interactive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communicationInteractive Powerpoint_How to Master effective communication
Interactive Powerpoint_How to Master effective communication
 
EPANDING THE CONTENT OF AN OUTLINE using notes.pptx
EPANDING THE CONTENT OF AN OUTLINE using notes.pptxEPANDING THE CONTENT OF AN OUTLINE using notes.pptx
EPANDING THE CONTENT OF AN OUTLINE using notes.pptx
 
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
TataKelola dan KamSiber Kecerdasan Buatan v022.pdfTataKelola dan KamSiber Kecerdasan Buatan v022.pdf
TataKelola dan KamSiber Kecerdasan Buatan v022.pdf
 
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPT
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPTECONOMIC CONTEXT - LONG FORM TV DRAMA - PPT
ECONOMIC CONTEXT - LONG FORM TV DRAMA - PPT
 

05_Lecture_Presentation.ppt

  • 1. Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings PowerPoint® Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp Chapter 5 The Structure and Function of Large Biological Molecules
  • 2. Overview: The Molecules of Life • All living things are made up of four classes of large biological molecules: carbohydrates, lipids, proteins, and nucleic acids • Within cells, small organic molecules are joined together to form larger molecules • Macromolecules are large molecules composed of thousands of covalently connected atoms • Molecular structure and function are inseparable Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 4. Concept 5.1: Macromolecules are polymers, built from monomers • A polymer is a long molecule consisting of many similar building blocks • These small building-block molecules are called monomers • Three of the four classes of life’s organic molecules are polymers: – Carbohydrates – Proteins – Nucleic acids Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 5. • A condensation reaction or more specifically a dehydration reaction occurs when two monomers bond together through the loss of a water molecule • Enzymes are macromolecules that speed up the dehydration process • Polymers are disassembled to monomers by hydrolysis, a reaction that is essentially the reverse of the dehydration reaction The Synthesis and Breakdown of Polymers Animation: Polymers Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 6. Fig. 5-2 Short polymer HO 1 2 3 H HO H Unlinked monomer Dehydration removes a water molecule, forming a new bond HO H2O H 1 2 3 4 Longer polymer (a) Dehydration reaction in the synthesis of a polymer HO 1 2 3 4 H H2O Hydrolysis adds a water molecule, breaking a bond HO H H HO 1 2 3 (b) Hydrolysis of a polymer
  • 7. Fig. 5-2a Dehydration removes a water molecule, forming a new bond Short polymer Unlinked monomer Longer polymer Dehydration reaction in the synthesis of a polymer HO HO HO H2O H H H 4 3 2 1 1 2 3 (a)
  • 8. Fig. 5-2b Hydrolysis adds a water molecule, breaking a bond Hydrolysis of a polymer HO HO HO H2O H H H 3 2 1 1 2 3 4 (b)
  • 9. The Diversity of Polymers • Each cell has thousands of different kinds of macromolecules • Macromolecules vary among cells of an organism, vary more within a species, and vary even more between species • An immense variety of polymers can be built from a small set of monomers 2 3 HO H Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 10. Concept 5.2: Carbohydrates serve as fuel and building material • Carbohydrates include sugars and the polymers of sugars • The simplest carbohydrates are monosaccharides, or single sugars • Carbohydrate macromolecules are polysaccharides, polymers composed of many sugar building blocks Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 11. Sugars • Monosaccharides have molecular formulas that are usually multiples of CH2O • Glucose (C6H12O6) is the most common monosaccharide • Monosaccharides are classified by – The location of the carbonyl group (as aldose or ketose) – The number of carbons in the carbon skeleton Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 13. Fig. 5-3a Glyceraldehyde Ribose Glucose Galactose Hexoses (C6H12O6) Pentoses (C5H10O5) Trioses (C3H6O3)
  • 15. • Though often drawn as linear skeletons, in aqueous solutions many sugars form rings • Monosaccharides serve as a major fuel for cells and as raw material for building molecules Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 16. Fig. 5-4 (a) Linear and ring forms (b) Abbreviated ring structure
  • 17. Fig. 5-4a (a) Linear and ring forms
  • 18. Fig. 5-4b (b) Abbreviated ring structure
  • 19. • A disaccharide is formed when a dehydration reaction joins two monosaccharides • This covalent bond is called a glycosidic linkage Animation: Disaccharides Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 20. Fig. 5-5 (b) Dehydration reaction in the synthesis of sucrose Glucose Fructose Sucrose Maltose Glucose Glucose (a) Dehydration reaction in the synthesis of maltose 1–4 glycosidic linkage 1–2 glycosidic linkage
  • 21. Polysaccharides • Polysaccharides, the polymers of sugars, have storage and structural roles • The structure and function of a polysaccharide are determined by its sugar monomers and the positions of glycosidic linkages Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 22. Storage Polysaccharides • Starch, a storage polysaccharide of plants, consists entirely of glucose monomers • Plants store surplus starch as granules within chloroplasts and other plastids Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 23. Fig. 5-6 (b) Glycogen: an animal polysaccharide Starch Glycogen Amylose Chloroplast (a) Starch: a plant polysaccharide Amylopectin Mitochondria Glycogen granules 0.5 µm 1 µm
  • 24. • Glycogen is a storage polysaccharide in animals • Humans and other vertebrates store glycogen mainly in liver and muscle cells Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 25. Structural Polysaccharides • The polysaccharide cellulose is a major component of the tough wall of plant cells • Like starch, cellulose is a polymer of glucose, but the glycosidic linkages differ • The difference is based on two ring forms for glucose: alpha () and beta () Animation: Polysaccharides Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 26. Fig. 5-7 (a) and glucose ring structures Glucose Glucose (b) Starch: 1–4 linkage of glucose monomers (b) Cellulose: 1–4 linkage of glucose monomers
  • 27. Fig. 5-7a (a) and glucose ring structures Glucose Glucose
  • 28. Fig. 5-7bc (b) Starch: 1–4 linkage of glucose monomers (c) Cellulose: 1–4 linkage of glucose monomers
  • 29. • Polymers with  glucose are helical • Polymers with  glucose are straight • In straight structures, H atoms on one strand can bond with OH groups on other strands • Parallel cellulose molecules held together this way are grouped into microfibrils, which form strong building materials for plants Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 31. • Enzymes that digest starch by hydrolyzing  linkages can’t hydrolyze  linkages in cellulose • Cellulose in human food passes through the digestive tract as insoluble fiber • Some microbes use enzymes to digest cellulose • Many herbivores, from cows to termites, have symbiotic relationships with these microbes Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 33. • Chitin, another structural polysaccharide, is found in the exoskeleton of arthropods • Chitin also provides structural support for the cell walls of many fungi Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 34. Fig. 5-10 The structure of the chitin monomer. (a) (b) (c) Chitin forms the exoskeleton of arthropods. Chitin is used to make a strong and flexible surgical thread.
  • 35. Concept 5.3: Lipids are a diverse group of hydrophobic molecules • Lipids are the one class of large biological molecules that do not form polymers • The unifying feature of lipids is having little or no affinity for water • Lipids are hydrophobic because they consist mostly of hydrocarbons, which form nonpolar covalent bonds • The most biologically important lipids are fats, phospholipids, and steroids Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 36. Fats • Fats are constructed from two types of smaller molecules: glycerol and fatty acids • Glycerol is a three-carbon alcohol with a hydroxyl group attached to each carbon • A fatty acid consists of a carboxyl group attached to a long carbon skeleton Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 37. Fig. 5-11 Fatty acid (palmitic acid) Glycerol (a) Dehydration reaction in the synthesis of a fat Ester linkage (b) Fat molecule (triacylglycerol)
  • 38. Fig. 5-11a Fatty acid (palmitic acid) (a) Dehydration reaction in the synthesis of a fat Glycerol
  • 39. Fig. 5-11b (b) Fat molecule (triacylglycerol) Ester linkage
  • 40. • Fats separate from water because water molecules form hydrogen bonds with each other and exclude the fats • In a fat, three fatty acids are joined to glycerol by an ester linkage, creating a triacylglycerol, or triglyceride Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 41. • Fatty acids vary in length (number of carbons) and in the number and locations of double bonds • Saturated fatty acids have the maximum number of hydrogen atoms possible and no double bonds • Unsaturated fatty acids have one or more double bonds Animation: Fats Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 42. Fig. 5-12 Structural formula of a saturated fat molecule Stearic acid, a saturated fatty acid (a) Saturated fat Structural formula of an unsaturated fat molecule Oleic acid, an unsaturated fatty acid (b) Unsaturated fat cis double bond causes bending
  • 43. Fig. 5-12a (a) Saturated fat Structural formula of a saturated fat molecule Stearic acid, a saturated fatty acid
  • 44. Fig. 5-12b (b) Unsaturated fat Structural formula of an unsaturated fat molecule Oleic acid, an unsaturated fatty acid cis double bond causes bending
  • 45. • Fats made from saturated fatty acids are called saturated fats, and are solid at room temperature • Most animal fats are saturated • Fats made from unsaturated fatty acids are called unsaturated fats or oils, and are liquid at room temperature • Plant fats and fish fats are usually unsaturated Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 46. • A diet rich in saturated fats may contribute to cardiovascular disease through plaque deposits • Hydrogenation is the process of converting unsaturated fats to saturated fats by adding hydrogen • Hydrogenating vegetable oils also creates unsaturated fats with trans double bonds • These trans fats may contribute more than saturated fats to cardiovascular disease Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 47. • The major function of fats is energy storage • Humans and other mammals store their fat in adipose cells • Adipose tissue also cushions vital organs and insulates the body Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 48. Phospholipids • In a phospholipid, two fatty acids and a phosphate group are attached to glycerol • The two fatty acid tails are hydrophobic, but the phosphate group and its attachments form a hydrophilic head Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 49. Fig. 5-13 (b) Space-filling model (a) (c) Structural formula Phospholipid symbol Fatty acids Hydrophilic head Hydrophobic tails Choline Phosphate Glycerol Hydrophobic tails Hydrophilic head
  • 50. Fig. 5-13ab (b) Space-filling model (a) Structural formula Fatty acids Choline Phosphate Glycerol Hydrophobic tails Hydrophilic head
  • 51. • When phospholipids are added to water, they self-assemble into a bilayer, with the hydrophobic tails pointing toward the interior • The structure of phospholipids results in a bilayer arrangement found in cell membranes • Phospholipids are the major component of all cell membranes Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 53. Steroids • Steroids are lipids characterized by a carbon skeleton consisting of four fused rings • Cholesterol, an important steroid, is a component in animal cell membranes • Although cholesterol is essential in animals, high levels in the blood may contribute to cardiovascular disease Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 55. Concept 5.4: Proteins have many structures, resulting in a wide range of functions • Proteins account for more than 50% of the dry mass of most cells • Protein functions include structural support, storage, transport, cellular communications, movement, and defense against foreign substances Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 57. Animation: Structural Proteins Animation: Storage Proteins Animation: Transport Proteins Animation: Receptor Proteins Animation: Contractile Proteins Animation: Defensive Proteins Animation: Hormonal Proteins Animation: Sensory Proteins Animation: Gene Regulatory Proteins Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 58. • Enzymes are a type of protein that acts as a catalyst to speed up chemical reactions • Enzymes can perform their functions repeatedly, functioning as workhorses that carry out the processes of life Animation: Enzymes Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 60. Polypeptides • Polypeptides are polymers built from the same set of 20 amino acids • A protein consists of one or more polypeptides Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 61. Amino Acid Monomers • Amino acids are organic molecules with carboxyl and amino groups • Amino acids differ in their properties due to differing side chains, called R groups Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 63. Fig. 5-17 Nonpolar Glycine (Gly or G) Alanine (Ala or A) Valine (Val or V) Leucine (Leu or L) Isoleucine (Ile or I) Methionine (Met or M) Phenylalanine (Phe or F) Trypotphan (Trp or W) Proline (Pro or P) Polar Serine (Ser or S) Threonine (Thr or T) Cysteine (Cys or C) Tyrosine (Tyr or Y) Asparagine (Asn or N) Glutamine (Gln or Q) Electrically charged Acidic Basic Aspartic acid (Asp or D) Glutamic acid (Glu or E) Lysine (Lys or K) Arginine (Arg or R) Histidine (His or H)
  • 64. Fig. 5-17a Nonpolar Glycine (Gly or G) Alanine (Ala or A) Valine (Val or V) Leucine (Leu or L) Isoleucine (Ile or I) Methionine (Met or M) Phenylalanine (Phe or F) Tryptophan (Trp or W) Proline (Pro or P)
  • 65. Fig. 5-17b Polar Asparagine (Asn or N) Glutamine (Gln or Q) Serine (Ser or S) Threonine (Thr or T) Cysteine (Cys or C) Tyrosine (Tyr or Y)
  • 66. Fig. 5-17c Acidic Arginine (Arg or R) Histidine (His or H) Aspartic acid (Asp or D) Glutamic acid (Glu or E) Lysine (Lys or K) Basic Electrically charged
  • 67. Amino Acid Polymers • Amino acids are linked by peptide bonds • A polypeptide is a polymer of amino acids • Polypeptides range in length from a few to more than a thousand monomers • Each polypeptide has a unique linear sequence of amino acids Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 68. Peptide bond Fig. 5-18 Amino end (N-terminus) Peptide bond Side chains Backbone Carboxyl end (C-terminus) (a) (b)
  • 69. Protein Structure and Function • A functional protein consists of one or more polypeptides twisted, folded, and coiled into a unique shape Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 70. Fig. 5-19 A ribbon model of lysozyme (a) (b) A space-filling model of lysozyme Groove Groove
  • 71. Fig. 5-19a A ribbon model of lysozyme (a) Groove
  • 72. Fig. 5-19b (b) A space-filling model of lysozyme Groove
  • 73. • The sequence of amino acids determines a protein’s three-dimensional structure • A protein’s structure determines its function Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 74. Fig. 5-20 Antibody protein Protein from flu virus
  • 75. Four Levels of Protein Structure • The primary structure of a protein is its unique sequence of amino acids • Secondary structure, found in most proteins, consists of coils and folds in the polypeptide chain • Tertiary structure is determined by interactions among various side chains (R groups) • Quaternary structure results when a protein consists of multiple polypeptide chains Animation: Protein Structure Introduction Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 76. • Primary structure, the sequence of amino acids in a protein, is like the order of letters in a long word • Primary structure is determined by inherited genetic information Animation: Primary Protein Structure Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 77. Fig. 5-21 Primary Structure Secondary Structure Tertiary Structure pleated sheet Examples of amino acid subunits +H3N Amino end helix Quaternary Structure
  • 78. Fig. 5-21a Amino acid subunits +H3N Amino end 25 20 15 10 5 1 Primary Structure
  • 79. Fig. 5-21b Amino acid subunits +H3N Amino end Carboxyl end 125 120 115 110 105 100 95 90 85 80 75 20 25 15 10 5 1
  • 80. • The coils and folds of secondary structure result from hydrogen bonds between repeating constituents of the polypeptide backbone • Typical secondary structures are a coil called an  helix and a folded structure called a  pleated sheet Animation: Secondary Protein Structure Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 81. Fig. 5-21c Secondary Structure pleated sheet Examples of amino acid subunits helix
  • 82. Fig. 5-21d Abdominal glands of the spider secrete silk fibers made of a structural protein containing pleated sheets. The radiating strands, made of dry silk fibers, maintain the shape of the web. The spiral strands (capture strands) are elastic, stretching in response to wind, rain, and the touch of insects.
  • 83. • Tertiary structure is determined by interactions between R groups, rather than interactions between backbone constituents • These interactions between R groups include hydrogen bonds, ionic bonds, hydrophobic interactions, and van der Waals interactions • Strong covalent bonds called disulfide bridges may reinforce the protein’s structure Animation: Tertiary Protein Structure Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 84. Fig. 5-21e Tertiary Structure Quaternary Structure
  • 85. Fig. 5-21f Polypeptide backbone Hydrophobic interactions and van der Waals interactions Disulfide bridge Ionic bond Hydrogen bond
  • 87. • Quaternary structure results when two or more polypeptide chains form one macromolecule • Collagen is a fibrous protein consisting of three polypeptides coiled like a rope • Hemoglobin is a globular protein consisting of four polypeptides: two alpha and two beta chains Animation: Quaternary Protein Structure Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 88. Sickle-Cell Disease: A Change in Primary Structure • A slight change in primary structure can affect a protein’s structure and ability to function • Sickle-cell disease, an inherited blood disorder, results from a single amino acid substitution in the protein hemoglobin Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 89. Fig. 5-22 Primary structure Secondary and tertiary structures Quaternary structure Normal hemoglobin (top view) Primary structure Secondary and tertiary structures Quaternary structure Function Function subunit Molecules do not associate with one another; each carries oxygen. Red blood cell shape Normal red blood cells are full of individual hemoglobin moledules, each carrying oxygen. 10 µm Normal hemoglobin 1 2 3 4 5 6 7 Val His LeuThr Pro Glu Glu Red blood cell shape subunit Exposed hydrophobic region Sickle-cell hemoglobin Molecules interact with one another and crystallize into a fiber; capacity to carry oxygen is greatly reduced. Fibers of abnormal hemoglobin deform red blood cell into sickle shape. 10 µm Sickle-cell hemoglobin Glu Pro Thr Leu His Val Val 1 2 3 4 5 6 7
  • 90. Fig. 5-22a Primary structure Secondary and tertiary structures Function Quaternary structure Molecules do not associate with one another; each carries oxygen. Normal hemoglobin (top view) subunit Normal hemoglobin 7 6 5 4 3 2 1 Glu Val His Leu Thr Pro Glu
  • 91. Fig. 5-22b Primary structure Secondary and tertiary structures Function Quaternary structure Molecules interact with one another and crystallize into a fiber; capacity to carry oxygen is greatly reduced. Sickle-cell hemoglobin subunit Sickle-cell hemoglobin 7 6 5 4 3 2 1 Val Val His Leu Thr Pro Glu Exposed hydrophobic region
  • 92. Fig. 5-22c Normal red blood cells are full of individual hemoglobin molecules, each carrying oxygen. Fibers of abnormal hemoglobin deform red blood cell into sickle shape. 10 µm 10 µm
  • 93. What Determines Protein Structure? • In addition to primary structure, physical and chemical conditions can affect structure • Alterations in pH, salt concentration, temperature, or other environmental factors can cause a protein to unravel • This loss of a protein’s native structure is called denaturation • A denatured protein is biologically inactive Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 94. Fig. 5-23 Normal protein Denatured protein Denaturation Renaturation
  • 95. Protein Folding in the Cell • It is hard to predict a protein’s structure from its primary structure • Most proteins probably go through several states on their way to a stable structure • Chaperonins are protein molecules that assist the proper folding of other proteins Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 96. Fig. 5-24 Hollow cylinder Cap Chaperonin (fully assembled) Polypeptide Steps of Chaperonin Action: An unfolded poly- peptide enters the cylinder from one end. 1 2 3 The cap attaches, causing the cylinder to change shape in such a way that it creates a hydrophilic environment for the folding of the polypeptide. The cap comes off, and the properly folded protein is released. Correctly folded protein
  • 98. Fig. 5-24b Correctly folded protein Polypeptide Steps of Chaperonin Action: 1 2 An unfolded poly- peptide enters the cylinder from one end. The cap attaches, causing the cylinder to change shape in such a way that it creates a hydrophilic environment for the folding of the polypeptide. The cap comes off, and the properly folded protein is released. 3
  • 99. • Scientists use X-ray crystallography to determine a protein’s structure • Another method is nuclear magnetic resonance (NMR) spectroscopy, which does not require protein crystallization • Bioinformatics uses computer programs to predict protein structure from amino acid sequences Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 100. Fig. 5-25 EXPERIMENT RESULTS X-ray source X-ray beam Diffracted X-rays Crystal Digital detector X-ray diffraction pattern RNA polymerase II RNA DNA
  • 101. Fig. 5-25a Diffracted X-rays EXPERIMENT X-ray source X-ray beam Crystal Digital detector X-ray diffraction pattern
  • 103. Concept 5.5: Nucleic acids store and transmit hereditary information • The amino acid sequence of a polypeptide is programmed by a unit of inheritance called a gene • Genes are made of DNA, a nucleic acid Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 104. The Roles of Nucleic Acids • There are two types of nucleic acids: – Deoxyribonucleic acid (DNA) – Ribonucleic acid (RNA) • DNA provides directions for its own replication • DNA directs synthesis of messenger RNA (mRNA) and, through mRNA, controls protein synthesis • Protein synthesis occurs in ribosomes Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 105. Fig. 5-26-1 mRNA Synthesis of mRNA in the nucleus DNA NUCLEUS CYTOPLASM 1
  • 106. Fig. 5-26-2 mRNA Synthesis of mRNA in the nucleus DNA NUCLEUS mRNA CYTOPLASM Movement of mRNA into cytoplasm via nuclear pore 1 2
  • 107. Fig. 5-26-3 mRNA Synthesis of mRNA in the nucleus DNA NUCLEUS mRNA CYTOPLASM Movement of mRNA into cytoplasm via nuclear pore Ribosome Amino acids Polypeptide Synthesis of protein 1 2 3
  • 108. The Structure of Nucleic Acids • Nucleic acids are polymers called polynucleotides • Each polynucleotide is made of monomers called nucleotides • Each nucleotide consists of a nitrogenous base, a pentose sugar, and a phosphate group • The portion of a nucleotide without the phosphate group is called a nucleoside Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 109. Fig. 5-27 5 end Nucleoside Nitrogenous base Phosphate group Sugar (pentose) (b) Nucleotide (a) Polynucleotide, or nucleic acid 3 end 3 C 3 C 5 C 5 C Nitrogenous bases Pyrimidines Cytosine (C) Thymine (T, in DNA) Uracil (U, in RNA) Purines Adenine (A) Guanine (G) Sugars Deoxyribose (in DNA) Ribose (in RNA) (c) Nucleoside components: sugars
  • 110. Fig. 5-27ab 5' end 5'C 3'C 5'C 3'C 3' end (a) Polynucleotide, or nucleic acid (b) Nucleotide Nucleoside Nitrogenous base 3'C 5'C Phosphate group Sugar (pentose)
  • 111. Fig. 5-27c-1 (c) Nucleoside components: nitrogenous bases Purines Guanine (G) Adenine (A) Cytosine (C) Thymine (T, in DNA) Uracil (U, in RNA) Nitrogenous bases Pyrimidines
  • 112. Fig. 5-27c-2 Ribose (in RNA) Deoxyribose (in DNA) Sugars (c) Nucleoside components: sugars
  • 113. Nucleotide Monomers • Nucleoside = nitrogenous base + sugar • There are two families of nitrogenous bases: – Pyrimidines (cytosine, thymine, and uracil) have a single six-membered ring – Purines (adenine and guanine) have a six- membered ring fused to a five-membered ring • In DNA, the sugar is deoxyribose; in RNA, the sugar is ribose • Nucleotide = nucleoside + phosphate group Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 114. Nucleotide Polymers • Nucleotide polymers are linked together to build a polynucleotide • Adjacent nucleotides are joined by covalent bonds that form between the –OH group on the 3 carbon of one nucleotide and the phosphate on the 5 carbon on the next • These links create a backbone of sugar- phosphate units with nitrogenous bases as appendages • The sequence of bases along a DNA or mRNA polymer is unique for each gene Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 115. The DNA Double Helix • A DNA molecule has two polynucleotides spiraling around an imaginary axis, forming a double helix • In the DNA double helix, the two backbones run in opposite 5 → 3 directions from each other, an arrangement referred to as antiparallel • One DNA molecule includes many genes • The nitrogenous bases in DNA pair up and form hydrogen bonds: adenine (A) always with thymine (T), and guanine (G) always with cytosine (C) Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 116. Fig. 5-28 Sugar-phosphate backbones 3' end 3' end 3' end 3' end 5' end 5' end 5' end 5' end Base pair (joined by hydrogen bonding) Old strands New strands Nucleotide about to be added to a new strand
  • 117. DNA and Proteins as Tape Measures of Evolution • The linear sequences of nucleotides in DNA molecules are passed from parents to offspring • Two closely related species are more similar in DNA than are more distantly related species • Molecular biology can be used to assess evolutionary kinship Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 118. The Theme of Emergent Properties in the Chemistry of Life: A Review • Higher levels of organization result in the emergence of new properties • Organization is the key to the chemistry of life Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 130. You should now be able to: 1. List and describe the four major classes of molecules 2. Describe the formation of a glycosidic linkage and distinguish between monosaccharides, disaccharides, and polysaccharides 3. Distinguish between saturated and unsaturated fats and between cis and trans fat molecules 4. Describe the four levels of protein structure Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings
  • 131. You should now be able to: 5. Distinguish between the following pairs: pyrimidine and purine, nucleotide and nucleoside, ribose and deoxyribose, the 5 end and 3 end of a nucleotide Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings