SlideShare a Scribd company logo
1 of 2
Identification of the Muscarinic Acetylcholine Receptor in D. opalescens
Specialized skin cells in photonic tissue of the squid, Doryteuthis opalescens, create
dynamically tunable camouflage. The first cell type responsible for these abilities are iridocytes,
which use tunable intracellular Bragg reflectors to produce iridescent colors through constructive
interference of reflected light. The reflector stack is formed by the unique structure of the
extracellular membrane, which repeatedly invaginates to form pleats of high refractive index
intracellular lamellae filled with reflectin proteins alternating with low refractive index
extracellular space filled with seawater (1, 2). Switchable leucophores, the other cell type, are
found exclusively in female squid and contain intracellular vesicles called leucosomes that
contain high refractive index reflectins; these vesicles scatter light of all visible wavelengths to
produce a white color (3). Both types of cells are hypothesized to contain muscarinic
acetylcholine receptors (mAChRs) that are activated by the neurotransmitter acetylcholine (ACh)
(2). These G protein coupled receptors convert external ACh stimuli into intracellular signals.
When activated, these receptors trigger a signal transduction cascade involving a heterotrimeric
G-protein subunit (Gαq) and Phospholipase C (PLC-4), ultimately causing a release of calcium
from the endoplasmic reticulum. Calcium then binds calmodulin (CALM), activating protein
kinases and phosphatases, subsequently changing phosphorylation of the cationic reflectin
proteins, causing them to overcome their Coulombic repulsion and condense (1, 2) This
condensation increases the refractive index of the membrane bound lamellae containing the
reflectin proteins, thereby activating reflectance, while simultaneously triggering expulsion of
water from the lamellae, reducing their thickness and spacing and thus changing the wavelength
of their reflected light (2).
The goal of my research is to determine if iridocytes and leucophores from D. opalescens
express a mAChR and other components of the signaling pathway to validate the model
presented above. So far, I have found that DNA encoding a mAChR with homology to that in D.
pealei can be PCR-amplified from cDNA generated from D. opalescens iridocyte and
leucophore mRNA. A ClustalW alignment of the mAChR transmembrane domains exhibited
49% identity and 67% similarity between human and squid. Of residues in the ACh-binding
pocket (4), 12 of the 13 amino acid residues that interact with ACh are conserved. I now am
analyzing transcripts in these tissues for three downstream signaling proteins, Gαq, PLC-β4, and
CALM because these are known to function in the mammalian ACh transduction system. PCR
successfully amplified all three cDNAs from iridocytes but not from leucophores.
My research has resulted in discovery of the mAChR protein sequence from the target
cells, allowing future researchers to produce antibodies that will help pinpoint the location of the
receptors in relation to the iridocyte lamellae and leucosomes vesicles. I further hope to develop
a model of the signal transduction pathway in leucophores, identifying the signal transducers and
localization of the mAChR to gain new insights into switchable broadband photonic scattering
system.
1. Tao AR, et al. (2010) The Role of Protein Assembly in Dynamically Tunable Bio-optical
Tissues. Biomaterials 31 (5): 793-801
2. DeMartini, DG, Krogstad, DV, and Morse, DE (2013) Membrane Invaginations Facilitate
Reversible Water Flux Driving Tunable Iridescence in a Dynamic Biophotonic System. Proc.
Natl. Acad. Sci. USA 110, 2552-2556.
3. DeMartini DG, et al. (2013) Dynamic Biophotonics: Female Squid Exhibit Sexually
Dimorphic Tunable Leucophores and Iridocytes. The Journal of Experimental Biology 216:
3733-741.
4. Chin SP, et al. (2014) Toward Activated Homology Models of the Human M1 Muscarinic
Acetylcholine Receptor. Journal of Molecular Graphics and Modeling 49: 91-98.

More Related Content

What's hot

Cell cycle regulation Basics
Cell cycle regulation BasicsCell cycle regulation Basics
Cell cycle regulation BasicsMinali Singh
 
Synaptonemal complex
Synaptonemal complexSynaptonemal complex
Synaptonemal complexRamya S
 
Edmund Kunjii Medical Research Council. Mitochondrial Biology Unit. Cambridge.
Edmund Kunjii  Medical Research Council. Mitochondrial Biology Unit. Cambridge. Edmund Kunjii  Medical Research Council. Mitochondrial Biology Unit. Cambridge.
Edmund Kunjii Medical Research Council. Mitochondrial Biology Unit. Cambridge. Fundación Ramón Areces
 
Genetics and malocclusion /certified fixed orthodontic courses by Indian de...
Genetics and malocclusion   /certified fixed orthodontic courses by Indian de...Genetics and malocclusion   /certified fixed orthodontic courses by Indian de...
Genetics and malocclusion /certified fixed orthodontic courses by Indian de...Indian dental academy
 
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAsMary Mullen
 
Dna and chromosomes
Dna and chromosomesDna and chromosomes
Dna and chromosomesaljeirou
 
genetic linkage and gene mapping
genetic linkage and gene mappinggenetic linkage and gene mapping
genetic linkage and gene mappingMahammed Faizan
 
Types of DNA and RNA and their importance
Types of DNA and RNA and their importanceTypes of DNA and RNA and their importance
Types of DNA and RNA and their importancePankaj Gami
 
Cell junctions , cell adhesion and extra cellular matrix
Cell junctions , cell adhesion and extra cellular matrixCell junctions , cell adhesion and extra cellular matrix
Cell junctions , cell adhesion and extra cellular matrixMinali Singh
 
Dissertation Talk 2009
Dissertation Talk 2009Dissertation Talk 2009
Dissertation Talk 2009lsoohoo
 

What's hot (19)

Cell cycle regulation Basics
Cell cycle regulation BasicsCell cycle regulation Basics
Cell cycle regulation Basics
 
Chloroplast
ChloroplastChloroplast
Chloroplast
 
Synaptonemal complex
Synaptonemal complexSynaptonemal complex
Synaptonemal complex
 
Presentation on Structure of Chromosomes
Presentation on Structure of ChromosomesPresentation on Structure of Chromosomes
Presentation on Structure of Chromosomes
 
Edmund Kunjii Medical Research Council. Mitochondrial Biology Unit. Cambridge.
Edmund Kunjii  Medical Research Council. Mitochondrial Biology Unit. Cambridge. Edmund Kunjii  Medical Research Council. Mitochondrial Biology Unit. Cambridge.
Edmund Kunjii Medical Research Council. Mitochondrial Biology Unit. Cambridge.
 
Genetics and malocclusion /certified fixed orthodontic courses by Indian de...
Genetics and malocclusion   /certified fixed orthodontic courses by Indian de...Genetics and malocclusion   /certified fixed orthodontic courses by Indian de...
Genetics and malocclusion /certified fixed orthodontic courses by Indian de...
 
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs
7 Ab Brain Cytochrome Oxidase Subunit Complementary DNAs
 
Dna and chromosomes
Dna and chromosomesDna and chromosomes
Dna and chromosomes
 
genetic linkage and gene mapping
genetic linkage and gene mappinggenetic linkage and gene mapping
genetic linkage and gene mapping
 
Special chromosome
Special chromosomeSpecial chromosome
Special chromosome
 
Presentation on Materials of Chromosomes
Presentation on Materials of ChromosomesPresentation on Materials of Chromosomes
Presentation on Materials of Chromosomes
 
defense_short_new
defense_short_newdefense_short_new
defense_short_new
 
Presentation on Folded Fibre Model
Presentation on Folded Fibre ModelPresentation on Folded Fibre Model
Presentation on Folded Fibre Model
 
Types of DNA and RNA and their importance
Types of DNA and RNA and their importanceTypes of DNA and RNA and their importance
Types of DNA and RNA and their importance
 
Gene mapping and its sequence
Gene mapping and its sequenceGene mapping and its sequence
Gene mapping and its sequence
 
Cell junctions , cell adhesion and extra cellular matrix
Cell junctions , cell adhesion and extra cellular matrixCell junctions , cell adhesion and extra cellular matrix
Cell junctions , cell adhesion and extra cellular matrix
 
Dissertation Talk 2009
Dissertation Talk 2009Dissertation Talk 2009
Dissertation Talk 2009
 
Dna structure
Dna   structureDna   structure
Dna structure
 
Amar genetics
Amar geneticsAmar genetics
Amar genetics
 

Similar to Distinction in the Major Paper

Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...
Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...
Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...Corbett Hall
 
Synapse miltan chowdhury
Synapse miltan chowdhurySynapse miltan chowdhury
Synapse miltan chowdhurymiltanc
 
Statement Of Purpose For Organic Chemistry
Statement Of Purpose For Organic ChemistryStatement Of Purpose For Organic Chemistry
Statement Of Purpose For Organic ChemistryHeather Dionne
 
Undergraduate Research Grant
Undergraduate Research GrantUndergraduate Research Grant
Undergraduate Research GrantKaitlin Zoccola
 
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...Khalid Mukhtar
 
module 2: ultra structure of cell
module 2: ultra structure of cellmodule 2: ultra structure of cell
module 2: ultra structure of cellMSCW Mysore
 
Top down proteomics of soluble and integral membrane proteins
Top down proteomics of soluble and integral membrane proteinsTop down proteomics of soluble and integral membrane proteins
Top down proteomics of soluble and integral membrane proteinsExpedeon
 
The Thiazide-sensitive NaCl
The Thiazide-sensitive NaClThe Thiazide-sensitive NaCl
The Thiazide-sensitive NaClAvin Snyder
 
Ellison MolBioSys b905602e published (2)
Ellison MolBioSys b905602e published (2)Ellison MolBioSys b905602e published (2)
Ellison MolBioSys b905602e published (2)Dr David Ellison
 
Kumc introduction to flow cytometry
Kumc introduction to flow cytometryKumc introduction to flow cytometry
Kumc introduction to flow cytometryRichard Hastings
 
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...Shohei Nagata
 
An introduction to flow cytometry- Ashwini.R
An introduction to flow cytometry- Ashwini.RAn introduction to flow cytometry- Ashwini.R
An introduction to flow cytometry- Ashwini.RAshwini R
 
Computational Biophysics in the Petascale Computing Era
Computational Biophysics in the Petascale Computing EraComputational Biophysics in the Petascale Computing Era
Computational Biophysics in the Petascale Computing Erainside-BigData.com
 
Nature - 454 Sequencing
Nature - 454 SequencingNature - 454 Sequencing
Nature - 454 SequencingMichael Weiner
 

Similar to Distinction in the Major Paper (20)

Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...
Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...
Brainbow - Combinatorial Fluorescent Protein Techniques to Map The Human Conn...
 
Synapse miltan chowdhury
Synapse miltan chowdhurySynapse miltan chowdhury
Synapse miltan chowdhury
 
Statement Of Purpose For Organic Chemistry
Statement Of Purpose For Organic ChemistryStatement Of Purpose For Organic Chemistry
Statement Of Purpose For Organic Chemistry
 
Final Draft
Final DraftFinal Draft
Final Draft
 
Undergraduate Research Grant
Undergraduate Research GrantUndergraduate Research Grant
Undergraduate Research Grant
 
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...
Structure and genesis of mitochondrial and chloroplast, DNA replication , tra...
 
module 2: ultra structure of cell
module 2: ultra structure of cellmodule 2: ultra structure of cell
module 2: ultra structure of cell
 
Cognitive neuroscience synapses
Cognitive neuroscience   synapsesCognitive neuroscience   synapses
Cognitive neuroscience synapses
 
Top down proteomics of soluble and integral membrane proteins
Top down proteomics of soluble and integral membrane proteinsTop down proteomics of soluble and integral membrane proteins
Top down proteomics of soluble and integral membrane proteins
 
The Thiazide-sensitive NaCl
The Thiazide-sensitive NaClThe Thiazide-sensitive NaCl
The Thiazide-sensitive NaCl
 
Ellison MolBioSys b905602e published (2)
Ellison MolBioSys b905602e published (2)Ellison MolBioSys b905602e published (2)
Ellison MolBioSys b905602e published (2)
 
Kumc introduction to flow cytometry
Kumc introduction to flow cytometryKumc introduction to flow cytometry
Kumc introduction to flow cytometry
 
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...
[論文紹介] Asgardアーキアのゲノムはアクチンを制御するプロフィリンをコードしている (Genomes of Asgard archaea enco...
 
An introduction to flow cytometry- Ashwini.R
An introduction to flow cytometry- Ashwini.RAn introduction to flow cytometry- Ashwini.R
An introduction to flow cytometry- Ashwini.R
 
CRISPR REPORT
CRISPR REPORTCRISPR REPORT
CRISPR REPORT
 
11membranes4
11membranes411membranes4
11membranes4
 
KN93
KN93KN93
KN93
 
Computational Biophysics in the Petascale Computing Era
Computational Biophysics in the Petascale Computing EraComputational Biophysics in the Petascale Computing Era
Computational Biophysics in the Petascale Computing Era
 
Nature - 454 Sequencing
Nature - 454 SequencingNature - 454 Sequencing
Nature - 454 Sequencing
 
FinalLabReport
FinalLabReportFinalLabReport
FinalLabReport
 

Distinction in the Major Paper

  • 1. Identification of the Muscarinic Acetylcholine Receptor in D. opalescens Specialized skin cells in photonic tissue of the squid, Doryteuthis opalescens, create dynamically tunable camouflage. The first cell type responsible for these abilities are iridocytes, which use tunable intracellular Bragg reflectors to produce iridescent colors through constructive interference of reflected light. The reflector stack is formed by the unique structure of the extracellular membrane, which repeatedly invaginates to form pleats of high refractive index intracellular lamellae filled with reflectin proteins alternating with low refractive index extracellular space filled with seawater (1, 2). Switchable leucophores, the other cell type, are found exclusively in female squid and contain intracellular vesicles called leucosomes that contain high refractive index reflectins; these vesicles scatter light of all visible wavelengths to produce a white color (3). Both types of cells are hypothesized to contain muscarinic acetylcholine receptors (mAChRs) that are activated by the neurotransmitter acetylcholine (ACh) (2). These G protein coupled receptors convert external ACh stimuli into intracellular signals. When activated, these receptors trigger a signal transduction cascade involving a heterotrimeric G-protein subunit (Gαq) and Phospholipase C (PLC-4), ultimately causing a release of calcium from the endoplasmic reticulum. Calcium then binds calmodulin (CALM), activating protein kinases and phosphatases, subsequently changing phosphorylation of the cationic reflectin proteins, causing them to overcome their Coulombic repulsion and condense (1, 2) This condensation increases the refractive index of the membrane bound lamellae containing the reflectin proteins, thereby activating reflectance, while simultaneously triggering expulsion of water from the lamellae, reducing their thickness and spacing and thus changing the wavelength of their reflected light (2).
  • 2. The goal of my research is to determine if iridocytes and leucophores from D. opalescens express a mAChR and other components of the signaling pathway to validate the model presented above. So far, I have found that DNA encoding a mAChR with homology to that in D. pealei can be PCR-amplified from cDNA generated from D. opalescens iridocyte and leucophore mRNA. A ClustalW alignment of the mAChR transmembrane domains exhibited 49% identity and 67% similarity between human and squid. Of residues in the ACh-binding pocket (4), 12 of the 13 amino acid residues that interact with ACh are conserved. I now am analyzing transcripts in these tissues for three downstream signaling proteins, Gαq, PLC-β4, and CALM because these are known to function in the mammalian ACh transduction system. PCR successfully amplified all three cDNAs from iridocytes but not from leucophores. My research has resulted in discovery of the mAChR protein sequence from the target cells, allowing future researchers to produce antibodies that will help pinpoint the location of the receptors in relation to the iridocyte lamellae and leucosomes vesicles. I further hope to develop a model of the signal transduction pathway in leucophores, identifying the signal transducers and localization of the mAChR to gain new insights into switchable broadband photonic scattering system. 1. Tao AR, et al. (2010) The Role of Protein Assembly in Dynamically Tunable Bio-optical Tissues. Biomaterials 31 (5): 793-801 2. DeMartini, DG, Krogstad, DV, and Morse, DE (2013) Membrane Invaginations Facilitate Reversible Water Flux Driving Tunable Iridescence in a Dynamic Biophotonic System. Proc. Natl. Acad. Sci. USA 110, 2552-2556. 3. DeMartini DG, et al. (2013) Dynamic Biophotonics: Female Squid Exhibit Sexually Dimorphic Tunable Leucophores and Iridocytes. The Journal of Experimental Biology 216: 3733-741. 4. Chin SP, et al. (2014) Toward Activated Homology Models of the Human M1 Muscarinic Acetylcholine Receptor. Journal of Molecular Graphics and Modeling 49: 91-98.