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Application of DSI
Sarah Hearne, November 2022
?
Uninformed selection
Data driven selection of
alleles and accessions of
breeding relevance
Annual Average Temperature
50
0 100 150
Mb
Heatshock transcription factor
hsftf9
00
Chromosome9
‐log10
p
0
20
40
60
80
Drought, temperature stress, acid soils, salinity, fertility, agronomic practice adaptation…
Alberto Romero
Ross-Ibarra, Gates, Runcie, Hearne, Li, Crossa, Perez, Sonder. Unpublished.
Training
panel
Training
panel
DSI and Genome-based Predictions
Data Stewardship under Allele Mining
• Ensure data remains in the
public domain as an IPG
• Ensure that data is as
accessible as possible to as
broad a range of stakeholders
as possible
• Data licensing in CIMMYT instances
of Dataverse and Germinate
platforms
– Licensing
• Use of data for research, educational,
scientific publishing purposes
• The user shall not seek any form of
intellectual property rights or other
legal rights over data accessed
• Data may not be redistributed in any
form without written consent of the
provider
• Data and derived knowledge available in
processed and raw forms
Proactive Data Management

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Understanding the use of DSI in research and the role of open access - Sarah Hearne, CIMMYT - The case of wheat and maize

  • 1. Application of DSI Sarah Hearne, November 2022
  • 2. ? Uninformed selection Data driven selection of alleles and accessions of breeding relevance
  • 3. Annual Average Temperature 50 0 100 150 Mb Heatshock transcription factor hsftf9 00 Chromosome9 ‐log10 p 0 20 40 60 80 Drought, temperature stress, acid soils, salinity, fertility, agronomic practice adaptation… Alberto Romero
  • 4. Ross-Ibarra, Gates, Runcie, Hearne, Li, Crossa, Perez, Sonder. Unpublished. Training panel Training panel DSI and Genome-based Predictions
  • 5. Data Stewardship under Allele Mining • Ensure data remains in the public domain as an IPG • Ensure that data is as accessible as possible to as broad a range of stakeholders as possible • Data licensing in CIMMYT instances of Dataverse and Germinate platforms – Licensing • Use of data for research, educational, scientific publishing purposes • The user shall not seek any form of intellectual property rights or other legal rights over data accessed • Data may not be redistributed in any form without written consent of the provider • Data and derived knowledge available in processed and raw forms Proactive Data Management