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The Global Biodiversity Information Facility and SANBI-
GBIF
Fatima Parker-Allie
Insert partner logos here
Fatima Parker-Allie
• Established intergovernmental
initiative by the OECD
• Free and open access to
biodiversity information
• International open data
research and policy
infrastructure
• Funded by governments
• 94 members:
54 countries &
40 institutions
http://www.gbif.org/participation/summary
WHAT IS GBIF?
GBIF BY THE NUMBERS
644,286,956
species occurrence
records
15,575
datasets
791
data-publishing
institutions
• http://www.gbif.org | 01 FEB 2016
The GBIF strategic plan (2012-2016), has 3 key
strategic imperatives:
1. Advance the Digital Content
Quantity: Fill the data gaps
Quality: Enhance fitness-for-use
Use: Measure data impact
2. Advance the Informatics Infrastructure
Expand the distributed infrastructure
Improve standards and interoperability
Foster community-developed standards, tools and services
3. Advance the Engagement
Engage a global GBIF community & Strengthen
Participant engagement and capacity
Recruit new Participant countries
Recruit strategic partners
NEW: Projects, surveys,
expeditions: sample-based data
Types of Data Served
Through GBIF
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect
Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect
Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect
Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey
Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey
Species Event Quantity Sample size Protocol
Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect
Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect
Species Event Quantity Sample size Protocol
Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect
Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect
Comparable
Not comparable
Extending GBIF for sample-based biodiversity data:
defined sampling protocols and species abundances
You can search the species mobilised
through checklists
Increase in the number of records
Downloadable
Enhanced filtering options
Build Queries, Download Content
Progress Update:
Experts offer recommendations for improving GBIF-mediated
data for agrobiodiversity research & distribution
modelling
 Agricultural biodiversity
Chair: Elizabeth Arnaud, Bioversity International
 Distribution modelling
Chair: Jorge Soberón, University of Kansas
Progress Update
Enhancing Data Fitness for Use
Progress Update
Most fundamentally, the global BI community must work together to deliver a shared
comprehensive checklist for all named species and effective open community
approaches to clean and improve such a checklist. Use of the same taxonomic backbone
by all of these initiatives, and shared effort to fill gaps and correct errors, is critical
Opportunities
http://gbif.devpost.com/
South Africa’s Contribution to GBIF12 month report ending dec’15
Data about SA : > 14m
Data from SA > 11m
SA became a GBIF Participant in 2003 and will continue this Participation
SABIF programme and Functions have become institutionalised – SANBI-GBIF
SANBI’s IPT
Data Availability and change for some taxonomic
groups
Click to edit Master text styles
• Second level
o Third level
South Africa’s Contribution to GBIF
12 month report ending dec’15
http://dx.doi.org/10.1016/j.biocon.2014.08.014
20 million records for 884 species
GBIF & Global Invasive Species Database
Models of invasion success for SA:
env suitability & propagule pressure
Watch list of 400 potential invaders
Methodology applicable to any region
INVASIVE SPECIES WATCH LISTS
Recent
GBIF Task Group on Data Fitness for Use in Research on Invasive Alien Species
Chair: Melodie McGeoch
SANBI member: Dr. John Wilson
FBIP
Specimens/observations/
Images
Taxonomy/
Species
Sequences/
barcodes
Research /Ecological /
Monitoring data
Literature
Records
Citizen
Science
ISPOT NBA
Biodiversity Information Management Directorate
SANBI Lead ACM
GBIF-Africa Network
GBIF EOLCatalogue of Life BHL IBOL
Geospatial
data
BHL AfricaBIOPAMA – IUCNGBIF Nodes
Extended Networks – Africa
Rising (Data-Science-Policy)
ACC
BID Grantees JRS
Science Policy Interface IPBES
IPBES Regional
Assessment
SDG’s CBD CMS CITES RAMSAR
sciencepolicyData
Source
data
Global
Datasets
Expert
Assessments
IUCN UNEP-WCMC Future Earth
Taxonomic Research Ecological Research Conservation Research Agricultural Research
Human Health Climate Change
Scientific
Research
Implemen-
tation &
Monitoring
National Government
Commitments
Schematic of the Biodiversity Informatics Landscape for
Biodiversity Evidence and Policy
SO1. Grow relevant
skills
University
departments
Students
UWC – SANBI MoU
Postgrad research
hub
Bursaries
Intern programme
GreenMatter
SO2. Build a robust
team
SANBI BIM staff
(SABIF)
Internal learning
sessions
Training
Recruitment
Skills matrix and
development plan
SO3. Improve quality
and use of information
Data providers
Data users
Training
Providers: Data
mobilisation and
fitness for use
Users: Website use
Modeling
SO4. Grow an inspired
coordinated network
Current and
potential users and
providers
BIMF
User needs analysis
Communication and
marketing
Holistic Approach to Capacity Development
TargetmarketsActivities
Increased Human
Capital
Innovation Economic
Growth
Thank You

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SANBI-GBIF_BIMF-FBIP2016_Parker-Allie_F

  • 1. The Global Biodiversity Information Facility and SANBI- GBIF Fatima Parker-Allie Insert partner logos here Fatima Parker-Allie
  • 2. • Established intergovernmental initiative by the OECD • Free and open access to biodiversity information • International open data research and policy infrastructure • Funded by governments • 94 members: 54 countries & 40 institutions http://www.gbif.org/participation/summary WHAT IS GBIF?
  • 3. GBIF BY THE NUMBERS 644,286,956 species occurrence records 15,575 datasets 791 data-publishing institutions • http://www.gbif.org | 01 FEB 2016
  • 4. The GBIF strategic plan (2012-2016), has 3 key strategic imperatives: 1. Advance the Digital Content Quantity: Fill the data gaps Quality: Enhance fitness-for-use Use: Measure data impact 2. Advance the Informatics Infrastructure Expand the distributed infrastructure Improve standards and interoperability Foster community-developed standards, tools and services 3. Advance the Engagement Engage a global GBIF community & Strengthen Participant engagement and capacity Recruit new Participant countries Recruit strategic partners
  • 5.
  • 6.
  • 7. NEW: Projects, surveys, expeditions: sample-based data Types of Data Served Through GBIF
  • 8. Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-06 12 individuals 1 km Butterfly transect Vanessa cardui PlotB-2014-06 8 individuals 1 km Butterfly transect Aglais urticae PlotB-2014-06 3 individuals 1 km Butterfly transect Species Event Quantity Sample size Protocol Vanessa cardui PlotA-2014-06 6 individuals 1 km Butterfly transect Aglais urticae PlotA-2014-06 4 individuals 1 km Butterfly transect Inachis io PlotA-2014-06 1 individual 1 km Butterfly transect Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-07 15 individuals 1 km Butterfly transect Vanessa cardui PlotB-2014-07 4 individuals 1 km Butterfly transect Aglais urticae PlotB-2014-07 1 individuals 1 km Butterfly transect Species Event Quantity Sample size Protocol Pieris rapae PlotB-2014-08 8 individuals 1 km Butterfly transect Aglais urticae PlotB-2014-08 2 individuals 1 km Butterfly transect Species Event Quantity Sample size Protocol Platichthys flesus DiveX-20120301 3 individuals 500 m2 Fish dive survey Sprattus sprattus DiveX-20120301 71 individuals 500 m2 Fish dive survey Species Event Quantity Sample size Protocol Vanessa cardui PlotA-2014-07 3 individuals 1 km Butterfly transect Aglais urticae PlotA-2014-07 8 individuals 1 km Butterfly transect Thecla betulae PlotA-2014-07 2 individuals 1 km Butterfly transect Species Event Quantity Sample size Protocol Pieris rapae PlotA-2014-08 1 individuals 1 km Butterfly transect Aglais urticae PlotA-2014-08 3 individuals 1 km Butterfly transect Comparable Not comparable Extending GBIF for sample-based biodiversity data: defined sampling protocols and species abundances
  • 9. You can search the species mobilised through checklists Increase in the number of records Downloadable Enhanced filtering options Build Queries, Download Content
  • 10. Progress Update: Experts offer recommendations for improving GBIF-mediated data for agrobiodiversity research & distribution modelling  Agricultural biodiversity Chair: Elizabeth Arnaud, Bioversity International  Distribution modelling Chair: Jorge Soberón, University of Kansas Progress Update Enhancing Data Fitness for Use
  • 12. Most fundamentally, the global BI community must work together to deliver a shared comprehensive checklist for all named species and effective open community approaches to clean and improve such a checklist. Use of the same taxonomic backbone by all of these initiatives, and shared effort to fill gaps and correct errors, is critical
  • 14. South Africa’s Contribution to GBIF12 month report ending dec’15 Data about SA : > 14m Data from SA > 11m SA became a GBIF Participant in 2003 and will continue this Participation SABIF programme and Functions have become institutionalised – SANBI-GBIF
  • 16. Data Availability and change for some taxonomic groups
  • 17. Click to edit Master text styles • Second level o Third level South Africa’s Contribution to GBIF 12 month report ending dec’15
  • 18. http://dx.doi.org/10.1016/j.biocon.2014.08.014 20 million records for 884 species GBIF & Global Invasive Species Database Models of invasion success for SA: env suitability & propagule pressure Watch list of 400 potential invaders Methodology applicable to any region INVASIVE SPECIES WATCH LISTS Recent GBIF Task Group on Data Fitness for Use in Research on Invasive Alien Species Chair: Melodie McGeoch SANBI member: Dr. John Wilson
  • 19. FBIP Specimens/observations/ Images Taxonomy/ Species Sequences/ barcodes Research /Ecological / Monitoring data Literature Records Citizen Science ISPOT NBA Biodiversity Information Management Directorate SANBI Lead ACM GBIF-Africa Network GBIF EOLCatalogue of Life BHL IBOL Geospatial data BHL AfricaBIOPAMA – IUCNGBIF Nodes Extended Networks – Africa Rising (Data-Science-Policy) ACC BID Grantees JRS Science Policy Interface IPBES IPBES Regional Assessment SDG’s CBD CMS CITES RAMSAR sciencepolicyData Source data Global Datasets Expert Assessments IUCN UNEP-WCMC Future Earth Taxonomic Research Ecological Research Conservation Research Agricultural Research Human Health Climate Change Scientific Research Implemen- tation & Monitoring National Government Commitments Schematic of the Biodiversity Informatics Landscape for Biodiversity Evidence and Policy
  • 20. SO1. Grow relevant skills University departments Students UWC – SANBI MoU Postgrad research hub Bursaries Intern programme GreenMatter SO2. Build a robust team SANBI BIM staff (SABIF) Internal learning sessions Training Recruitment Skills matrix and development plan SO3. Improve quality and use of information Data providers Data users Training Providers: Data mobilisation and fitness for use Users: Website use Modeling SO4. Grow an inspired coordinated network Current and potential users and providers BIMF User needs analysis Communication and marketing Holistic Approach to Capacity Development TargetmarketsActivities Increased Human Capital Innovation Economic Growth