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Preliminary	
  experiments	
  with	
  P.	
  aeruginosa	
  show	
  that	
  there	
  are	
  very	
  few	
  pvDD	
  
colonies	
  and	
  very	
  many	
  PA01	
  colonies	
  when	
  each	
  strain	
  is	
  grown	
  on	
  their	
  own.	
  
The	
  number	
  of	
  colony-­‐forming	
  units	
  (CFUs)	
  is	
  calculated	
  from	
  the	
  colony	
  count.	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
	
  
Further	
  analysis	
  of	
  the	
  compeDDon	
  culture	
  by	
  comparing	
  the	
  pvDD	
  colonies	
  
(cheater)	
  and	
  PA01	
  (cooperator)	
  for	
  each	
  experiment	
  reveals	
  that	
  the	
  number	
  
of	
  pvDD	
  colonies	
  is	
  higher	
  in	
  the	
  compeDDon	
  cultures	
  as	
  opposed	
  to	
  the	
  pvDD	
  
only	
  culture,	
  the	
  values	
  of	
  each	
  were	
  averaged.	
  InteresDngly,	
  the	
  50/50	
  culture	
  
has	
  a	
  higher	
  percentage	
  of	
  pvDD	
  than	
  the	
  99/1.	
  
Cheating within Pseudomonas aeruginosa
and its Relationship to Frequency-Dependence
Erica Ryu, Fredrik Inglis, David Queller, Joan Strassmann
Washington University in St. Louis
Introduction
Methods
Current and Future Experiments
Conclusions
Experiments	
  with	
  P.	
  aeruginosa	
  
1.  PA01	
  –	
  cooperator	
  strain;	
  pvDD	
  –	
  cheater	
  strain	
  (gene	
  necessary	
  for	
  
siderophore	
  producDon	
  has	
  been	
  knocked	
  out)	
  
2.  Eight	
  trials	
  each	
  of	
  PA01	
  and	
  pvDD	
  strains	
  were	
  grown	
  separately	
  
(control),	
  while	
  eight	
  trials	
  of	
  PA01	
  and	
  pvDD	
  were	
  mixed	
  and	
  
therefore	
  grown	
  together	
  (experiment)	
  
•  The	
  bacteria	
  were	
  grown	
  in	
  iron-­‐deficient	
  CAA	
  media	
  and	
  
incubated	
  for	
  24	
  hours	
  at	
  35ºC.	
  
3.  ASer	
  growth,	
  cultures	
  were	
  diluted	
  to	
  10-­‐6	
  and	
  spread	
  on	
  iron-­‐rich	
  
plates	
  colonies	
  counted	
  under	
  a	
  UV	
  light	
  
•  Two	
  experiments	
  –	
  50/50	
  raDo,	
  and	
  99/1	
  raDo	
  (PA01/pvDD)	
  
References and Acknowledgements
Results
CooperaDon	
  and	
  compeDDon	
  are	
  social	
  behaviors	
  that	
  are	
  essenDal	
  in	
  
evoluDonary	
  biology	
  because	
  they	
  drive	
  certain	
  species	
  to	
  thrive	
  while	
  
others	
  are	
  pushed	
  towards	
  exDncDon.	
  
P.	
  aeruginosa	
  is	
  a	
  bacterium	
  that	
  exhibits	
  both	
  compeDDon	
  and	
  
cooperaDon.	
  
•  In	
  iron-­‐deficient	
  environments,	
  the	
  bacteria	
  produce	
  siderophores,	
  
which	
  are	
  parDcles	
  that	
  scavange	
  iron.	
  They	
  take	
  up	
  siderophores	
  
bound	
  to	
  iron,	
  because	
  iron	
  is	
  a	
  necessary	
  component	
  for	
  survival.	
  
•  These	
  siderophore-­‐producing	
  bacteria	
  can	
  be	
  thought	
  of	
  as	
  
cooperators	
  because	
  they	
  rarely	
  reabsorb	
  their	
  own	
  siderophores.	
  
•  Some	
  bacteria,	
  the	
  cheaters,	
  do	
  not	
  produce	
  siderophores,	
  yet	
  sDll	
  
absorb	
  siderophores	
  carrying	
  iron.	
  (Griffin	
  2004).	
  
	
  
	
  
	
  
	
  
	
  
Siderophore	
  
Without	
  iron	
  
	
  
	
  
Cheaters	
  should	
  outcompete	
  the	
  cooperators	
  because	
  they	
  have	
  more	
  
energy	
  to	
  grow.	
  This	
  also	
  means	
  that	
  the	
  cheaters	
  should	
  grow	
  be[er	
  in	
  
a	
  lower	
  concentraDon	
  compared	
  to	
  the	
  cooperators,	
  because	
  more	
  
siderophores	
  will	
  be	
  present	
  in	
  the	
  media.	
  Thus,	
  it	
  is	
  possible	
  that	
  
frequency-­‐dependent	
  selecDon	
  will	
  operate.	
  	
  
	
  
Ques0on:	
  
How	
  does	
  frequency-­‐dependence	
  affect	
  compe00on	
  between	
  the	
  
cheater	
  and	
  cooperator	
  strains	
  of	
  Pseudomonas	
  aeruginosa?	
  
Predic0on:	
  
Cooperators	
  grow	
  be@er	
  alone,	
  cheaters	
  will	
  outcompete	
  cooperators,	
  
and	
  cheaters	
  will	
  grow	
  be@er	
  when	
  at	
  a	
  lower	
  concentra0on.	
  
Griffin,	
  A.S.,	
  West,	
  S.A.,	
  Buckling,	
  A.	
  (2004).	
  CooperaDon	
  and	
  
compeDDon	
  in	
  pathogenic	
  bacteria.	
  Nature,	
  430,	
  1024-­‐1027.	
  
	
  
Thanks	
  to	
  the	
  Queller-­‐Strassmann	
  lab	
  at	
  Washington	
  University,	
  
especially	
  Fred	
  Inglis	
  for	
  personally	
  mentoring	
  me.	
  I	
  would	
  also	
  like	
  
to	
  thank	
  Tammy	
  Haselkorn	
  and	
  Joan	
  Strassmann	
  for	
  their	
  advice.	
  I	
  
would	
  like	
  to	
  thank	
  Odion	
  Asikhia	
  for	
  being	
  a	
  wonderful	
  lab	
  partner.	
  
Lastly,	
  I	
  would	
  like	
  to	
  thank	
  my	
  parents	
  for	
  helping	
  me	
  with	
  
everything.	
  
This	
  material	
  is	
  based	
  upon	
  work	
  supported	
  by	
  the	
  NaDonal	
  Science	
  
FoundaDon	
  under	
  grant	
  numbers	
  IOS	
  1256416	
  and	
  DEB	
  1146375	
  and	
  
the	
  John	
  Templeton	
  FoundaDon.	
  
Future	
  P.	
  fluorescens	
  experiments	
  
•  PF3	
  and	
  PF2	
  grown	
  in	
  the	
  sori	
  of	
  D.	
  discoideum	
  with	
  other	
  amoeba	
  
spores	
  
•  CompeDDon	
  cultures	
  grown	
  on	
  iron-­‐rich	
  agar	
  plates.	
  
•  Colonies	
  counted	
  in	
  order	
  to	
  determine	
  pvDD/PA01	
  and	
  therefore	
  
the	
  effect	
  of	
  D.	
  discoideum	
  on	
  P.	
  fluorescens	
  compeDDon.	
  
	
  
P.	
  fluorescens	
  tagging	
  
•  Tagging	
  of	
  P.	
  fluorescens	
  with	
  Mcherry	
  and	
  GFP	
  has	
  been	
  a[empted	
  
but	
  is	
  not	
  yet	
  successful.	
  
•  Various	
  plasmid	
  extracDon	
  kits	
  have	
  been	
  used,	
  and	
  both	
  
electroporaDon	
  and	
  conjugaDon	
  have	
  been	
  a[empted.	
  
•  A	
  high	
  quanDty	
  of	
  Mcherry	
  plasmid	
  has	
  been	
  obtained	
  (~400ng/µl).	
  
•  Because	
  pvDD	
  cannot	
  grow	
  in	
  a	
  iron-­‐deficient	
  without	
  PA01,	
  pvDD	
  is	
  	
  
the	
  cheater	
  and	
  PA01	
  is	
  the	
  cooperator.	
  
•  pvDD	
  grows	
  be[er	
  in	
  compeDDon,	
  but	
  not	
  as	
  much	
  as	
  expected.	
  
•  pvDD	
  grows	
  be[er	
  in	
  the	
  50/50	
  culture,	
  contradicDng	
  frequency	
  	
  
dependence	
  expectaDons.	
  
•  pvDD	
  does	
  not	
  outcompete	
  PA01,	
  contradicDng	
  compeDDon	
  
expectaDons.	
  
•  Given	
  that	
  previous	
  studies	
  show	
  that	
  cheater	
  and	
  cooperator	
  strains	
  of	
  
P.	
  aeruginosa	
  cannot	
  coexist,	
  these	
  results	
  likely	
  derive	
  from	
  	
  
contaminaDon	
  and	
  clumping	
  issues.	
  
Cooperator	
  
Cheater	
  
Siderophore	
  
with	
  iron	
  
The	
  cheater-­‐cooperator	
  relaDonship	
  is	
  also	
  apparent	
  in	
  Pseudomonas	
  
	
  fluorescens,	
  a	
  bacterium	
  consumed	
  by	
  the	
  social	
  amoeba	
  Dictyostelium	
  
discoideum.	
  The	
  strains	
  are	
  surprisingly	
  able	
  to	
  coexist,	
  countering	
  	
  
P.	
  aeruginosa	
  findings	
  from	
  previous	
  studies	
  (keeping	
  in	
  mind	
  that	
  my	
  	
  
results	
  are	
  probably	
  due	
  to	
  contaminaDon	
  issues).	
  It	
  is	
  possible	
  that	
  	
  
growth	
  with	
  D.	
  discoideum	
  is	
  affecDng	
  the	
  cheater	
  and	
  cooperator	
  	
  
populaDons,	
  which	
  is	
  why	
  P.	
  fluorescens	
  strains	
  are	
  able	
  to	
  coexist.	
  	
  

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p.aeruginosa poster - final

  • 1. Preliminary  experiments  with  P.  aeruginosa  show  that  there  are  very  few  pvDD   colonies  and  very  many  PA01  colonies  when  each  strain  is  grown  on  their  own.   The  number  of  colony-­‐forming  units  (CFUs)  is  calculated  from  the  colony  count.                                                             Further  analysis  of  the  compeDDon  culture  by  comparing  the  pvDD  colonies   (cheater)  and  PA01  (cooperator)  for  each  experiment  reveals  that  the  number   of  pvDD  colonies  is  higher  in  the  compeDDon  cultures  as  opposed  to  the  pvDD   only  culture,  the  values  of  each  were  averaged.  InteresDngly,  the  50/50  culture   has  a  higher  percentage  of  pvDD  than  the  99/1.   Cheating within Pseudomonas aeruginosa and its Relationship to Frequency-Dependence Erica Ryu, Fredrik Inglis, David Queller, Joan Strassmann Washington University in St. Louis Introduction Methods Current and Future Experiments Conclusions Experiments  with  P.  aeruginosa   1.  PA01  –  cooperator  strain;  pvDD  –  cheater  strain  (gene  necessary  for   siderophore  producDon  has  been  knocked  out)   2.  Eight  trials  each  of  PA01  and  pvDD  strains  were  grown  separately   (control),  while  eight  trials  of  PA01  and  pvDD  were  mixed  and   therefore  grown  together  (experiment)   •  The  bacteria  were  grown  in  iron-­‐deficient  CAA  media  and   incubated  for  24  hours  at  35ºC.   3.  ASer  growth,  cultures  were  diluted  to  10-­‐6  and  spread  on  iron-­‐rich   plates  colonies  counted  under  a  UV  light   •  Two  experiments  –  50/50  raDo,  and  99/1  raDo  (PA01/pvDD)   References and Acknowledgements Results CooperaDon  and  compeDDon  are  social  behaviors  that  are  essenDal  in   evoluDonary  biology  because  they  drive  certain  species  to  thrive  while   others  are  pushed  towards  exDncDon.   P.  aeruginosa  is  a  bacterium  that  exhibits  both  compeDDon  and   cooperaDon.   •  In  iron-­‐deficient  environments,  the  bacteria  produce  siderophores,   which  are  parDcles  that  scavange  iron.  They  take  up  siderophores   bound  to  iron,  because  iron  is  a  necessary  component  for  survival.   •  These  siderophore-­‐producing  bacteria  can  be  thought  of  as   cooperators  because  they  rarely  reabsorb  their  own  siderophores.   •  Some  bacteria,  the  cheaters,  do  not  produce  siderophores,  yet  sDll   absorb  siderophores  carrying  iron.  (Griffin  2004).             Siderophore   Without  iron       Cheaters  should  outcompete  the  cooperators  because  they  have  more   energy  to  grow.  This  also  means  that  the  cheaters  should  grow  be[er  in   a  lower  concentraDon  compared  to  the  cooperators,  because  more   siderophores  will  be  present  in  the  media.  Thus,  it  is  possible  that   frequency-­‐dependent  selecDon  will  operate.       Ques0on:   How  does  frequency-­‐dependence  affect  compe00on  between  the   cheater  and  cooperator  strains  of  Pseudomonas  aeruginosa?   Predic0on:   Cooperators  grow  be@er  alone,  cheaters  will  outcompete  cooperators,   and  cheaters  will  grow  be@er  when  at  a  lower  concentra0on.   Griffin,  A.S.,  West,  S.A.,  Buckling,  A.  (2004).  CooperaDon  and   compeDDon  in  pathogenic  bacteria.  Nature,  430,  1024-­‐1027.     Thanks  to  the  Queller-­‐Strassmann  lab  at  Washington  University,   especially  Fred  Inglis  for  personally  mentoring  me.  I  would  also  like   to  thank  Tammy  Haselkorn  and  Joan  Strassmann  for  their  advice.  I   would  like  to  thank  Odion  Asikhia  for  being  a  wonderful  lab  partner.   Lastly,  I  would  like  to  thank  my  parents  for  helping  me  with   everything.   This  material  is  based  upon  work  supported  by  the  NaDonal  Science   FoundaDon  under  grant  numbers  IOS  1256416  and  DEB  1146375  and   the  John  Templeton  FoundaDon.   Future  P.  fluorescens  experiments   •  PF3  and  PF2  grown  in  the  sori  of  D.  discoideum  with  other  amoeba   spores   •  CompeDDon  cultures  grown  on  iron-­‐rich  agar  plates.   •  Colonies  counted  in  order  to  determine  pvDD/PA01  and  therefore   the  effect  of  D.  discoideum  on  P.  fluorescens  compeDDon.     P.  fluorescens  tagging   •  Tagging  of  P.  fluorescens  with  Mcherry  and  GFP  has  been  a[empted   but  is  not  yet  successful.   •  Various  plasmid  extracDon  kits  have  been  used,  and  both   electroporaDon  and  conjugaDon  have  been  a[empted.   •  A  high  quanDty  of  Mcherry  plasmid  has  been  obtained  (~400ng/µl).   •  Because  pvDD  cannot  grow  in  a  iron-­‐deficient  without  PA01,  pvDD  is     the  cheater  and  PA01  is  the  cooperator.   •  pvDD  grows  be[er  in  compeDDon,  but  not  as  much  as  expected.   •  pvDD  grows  be[er  in  the  50/50  culture,  contradicDng  frequency     dependence  expectaDons.   •  pvDD  does  not  outcompete  PA01,  contradicDng  compeDDon   expectaDons.   •  Given  that  previous  studies  show  that  cheater  and  cooperator  strains  of   P.  aeruginosa  cannot  coexist,  these  results  likely  derive  from     contaminaDon  and  clumping  issues.   Cooperator   Cheater   Siderophore   with  iron   The  cheater-­‐cooperator  relaDonship  is  also  apparent  in  Pseudomonas    fluorescens,  a  bacterium  consumed  by  the  social  amoeba  Dictyostelium   discoideum.  The  strains  are  surprisingly  able  to  coexist,  countering     P.  aeruginosa  findings  from  previous  studies  (keeping  in  mind  that  my     results  are  probably  due  to  contaminaDon  issues).  It  is  possible  that     growth  with  D.  discoideum  is  affecDng  the  cheater  and  cooperator     populaDons,  which  is  why  P.  fluorescens  strains  are  able  to  coexist.