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ANDREAPALACIO MONTOYA
TERCER SEMESTRE
MEDICINA
UNIVERSIDAD PONTIFICIA BOLIVARIANA
INTRODUCTION
LactobacillusReuteriN16
L. reuteri, which was first isolated in 1962, has been recognized as an
obligatory heterofermentative and endogenous lactic acid bacterial
species in the GI tract of mammals. Furthermore, specific L. reuteri
strains have been found to display various beneficial effects, including
the production of antimicrobial molecules such as organic acids,
ethanol, and reuterin . Several L. reuteri strains can decrease the levels
of pro-infammatory cytokines and thus promote the function and
development of regulatory T cells. In addition, specifc L. reuteri strains
have been shown to reduce the incidence and severity of diarrhea,
prevent colic and necrotic enterocolitis, and maintain a functional
mucosal barrier in humans.
PlasmidpTE15
Plasmids are circular or linear extra-chromosomal DNA molecules that
replicate and transcribe independently of chromosomal DNA. They are
normally present in bacteria, and sometimes in eukaryotic organisms
such as yeast.
Plasmid DNA molecules adopt a double helix conformation like the
DNA of chromosomes, although, by definition, they are outside of
them. Plasmids have been found in almost all bacteria. Unlike DNA,
chromosomes, plasmids do not have associated proteins.
INTRODUCTION
GENERALOBJECTIVE
METHODS
 SEQUENCING
It is an experiment in which the sequence of nucleotides that
make up a strand of DNA is determined.
When analyzing the sequence of the lactobacillus plasmid
and seeking to know how it was genetically made. Universal
primer was used according to the procedures described in
the Sequenase 2.0 enzyme kit (US Biochem). Analysis of DNA
sequence with gene finding and pattern recognition was
performed using Blastx and GCG Wisconsin Package
(UWGCG) provided by the Genetics Computer Group.
 ELECTROFORESIS
Electrophoresis is a laboratory technique used to separate
DNA, RNA, or protein molecules based on their size and
electrical charge. An electrical current is used to move the
molecules through a gel or other matrix. The pores in the gel or
matrix act like a sieve, allowing smaller molecules to move
faster than larger molecules.
 Molecular manipulations, such as genome and plasmid
isolation, electrophoresis, restriction endonuclease digestion,
and fragment ligation, were performed according to standard
techniques
METHODS
 PLASMID CONSTRUCTION
The plasmid is introduced into bacteria through a process called
transformation, and bacteria containing the plasmid are selected for
by antibiotics. Bacteria with the correct plasmid are used to make
more plasmid DNA or, in some cases, gene expression is induced to
make protein.
. To further confirm which fragments may contain the needed
regions of replication origins, pTE15-RO was digested and subcloned
as described
 RESTRICTION
Restriction enzymes are used to cut the DNA strands of two
plasmids, producing DNA fragments with complementary sticky
ends that can be reassembled to create a recombinant plasmid.
RESULTS
In this image you can focus on lines 5
and 6 this shows us the presence of
DNA so the bands of cars 5 and 6
contain replicated DNA derived from
L. reuteri and that grew in the medium
with the MRS compounds which is why
they both look like pounds that are
parallel.
RESULTS
In this other one we are going to
concentrate on the image on the
left, the A that has the most
significant findings, and they are that
the ssDNA grows with or without
rifampicin, that is to say that the
bacteria from which they took the
RNA has mechanisms of resistance to
rifampicin and that is why it grows in
the lines that it has + and that it has -
and the other lane where there is
only one line corresponds to the
location of the ssDNA, that is, how
much it weighs
DISCUSSION
AUTOR PROPUESTA COINCIDE
Wu Y-C These plasmids rely exclusively on host factors
for both double-strand melting and primer
synthesis; thus, their replication does not
depend on plasmid-encoding Rep proteins.
YES
Takechi S, Matsui H,
Itoh T
The Rep protein in class C plasmids displays
primase activity, synthesizing a unique primer
RNA (ppApGpA) that is extended by DNA
polymerase I at a fxed site in the origin región.
YES
Weaver KE, Clewell
D, An F
When compared RepB and RepC of pTE15 with
RepB and RepC of pAD1 using Blastp, which
previous had been functional study, the
similarity for amino acids was approximately 57
and 32%, respectively. Te RepB involved in
plasmid copy control and RepC may be
involved in stable inheritance.
YES
CONCLUSION
➢ Gracias a las diferentes técnicas utilizadas en este articulo, pudimos observar las
diferentes características del plásmido pTE15 de L reuteri N16 y se pudo clasificar como
una clase de tipo theta diferente en los lactobacilos
➢ Es muy importante seguir desarrollando técnicas de laboratorio enfocadas en la biología
molecular para continuar con el estudio de moléculas y microorganismos beneficios y
patológicos para el cuerpo humano.
MAPACONCEPTUAL
BACILOS
Se dividen en
Bacterias que al microscopio se
observan en forma de bastón
Gram negativas
Gram positivas
Pueden ser
Patógenas Benéficas
Tinción purpura o
azulada
como
Bacterias lácticas Excretan vitaminas
y prebióticos
Mejoran el desarrollo de la
microbiota del tracto GI y
pueden tener efectos
inmunomoduladores
Tinción rosa o roja
Posee una pared
celular gruesa
Evita que los
glóbulos rojos las
ingieran
Pueden ser
Patógenas Benéficas
Suelen ser muy
resistentes a los
antibióticos
PLÁSMIDO
Microorganismos microscópicos
Bacterias
Los científicos usan métodos de ADN
recombinante para insertar el
plásmido en el gen que se desea
estudiar
Están separados físicamente
del ADN cromosómico
Cuando el plásmido se copia a
si mismo, también copia el gen
insertado
Se pueden trasmitir de
célula a célula
Tienen un numero reducido de
genes (algunos son asociados a
la resistencia contra antibióticos
Molécula pequeña
de ADN circular
Se encuentra presente en
Se replican de
manera
independiente
Los círculos que tienen el
ADN clonado se llaman
PLÁSMIDOS
Los PLÁSMIDOS son una
herramienta fundamental de la
tecnología del ADN
recombinante

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plasmid pTE15 from Lactobacillus reuteri N16

  • 2. INTRODUCTION LactobacillusReuteriN16 L. reuteri, which was first isolated in 1962, has been recognized as an obligatory heterofermentative and endogenous lactic acid bacterial species in the GI tract of mammals. Furthermore, specific L. reuteri strains have been found to display various beneficial effects, including the production of antimicrobial molecules such as organic acids, ethanol, and reuterin . Several L. reuteri strains can decrease the levels of pro-infammatory cytokines and thus promote the function and development of regulatory T cells. In addition, specifc L. reuteri strains have been shown to reduce the incidence and severity of diarrhea, prevent colic and necrotic enterocolitis, and maintain a functional mucosal barrier in humans.
  • 3. PlasmidpTE15 Plasmids are circular or linear extra-chromosomal DNA molecules that replicate and transcribe independently of chromosomal DNA. They are normally present in bacteria, and sometimes in eukaryotic organisms such as yeast. Plasmid DNA molecules adopt a double helix conformation like the DNA of chromosomes, although, by definition, they are outside of them. Plasmids have been found in almost all bacteria. Unlike DNA, chromosomes, plasmids do not have associated proteins. INTRODUCTION
  • 5. METHODS  SEQUENCING It is an experiment in which the sequence of nucleotides that make up a strand of DNA is determined. When analyzing the sequence of the lactobacillus plasmid and seeking to know how it was genetically made. Universal primer was used according to the procedures described in the Sequenase 2.0 enzyme kit (US Biochem). Analysis of DNA sequence with gene finding and pattern recognition was performed using Blastx and GCG Wisconsin Package (UWGCG) provided by the Genetics Computer Group.  ELECTROFORESIS Electrophoresis is a laboratory technique used to separate DNA, RNA, or protein molecules based on their size and electrical charge. An electrical current is used to move the molecules through a gel or other matrix. The pores in the gel or matrix act like a sieve, allowing smaller molecules to move faster than larger molecules.  Molecular manipulations, such as genome and plasmid isolation, electrophoresis, restriction endonuclease digestion, and fragment ligation, were performed according to standard techniques
  • 6. METHODS  PLASMID CONSTRUCTION The plasmid is introduced into bacteria through a process called transformation, and bacteria containing the plasmid are selected for by antibiotics. Bacteria with the correct plasmid are used to make more plasmid DNA or, in some cases, gene expression is induced to make protein. . To further confirm which fragments may contain the needed regions of replication origins, pTE15-RO was digested and subcloned as described  RESTRICTION Restriction enzymes are used to cut the DNA strands of two plasmids, producing DNA fragments with complementary sticky ends that can be reassembled to create a recombinant plasmid.
  • 7. RESULTS In this image you can focus on lines 5 and 6 this shows us the presence of DNA so the bands of cars 5 and 6 contain replicated DNA derived from L. reuteri and that grew in the medium with the MRS compounds which is why they both look like pounds that are parallel.
  • 8. RESULTS In this other one we are going to concentrate on the image on the left, the A that has the most significant findings, and they are that the ssDNA grows with or without rifampicin, that is to say that the bacteria from which they took the RNA has mechanisms of resistance to rifampicin and that is why it grows in the lines that it has + and that it has - and the other lane where there is only one line corresponds to the location of the ssDNA, that is, how much it weighs
  • 9. DISCUSSION AUTOR PROPUESTA COINCIDE Wu Y-C These plasmids rely exclusively on host factors for both double-strand melting and primer synthesis; thus, their replication does not depend on plasmid-encoding Rep proteins. YES Takechi S, Matsui H, Itoh T The Rep protein in class C plasmids displays primase activity, synthesizing a unique primer RNA (ppApGpA) that is extended by DNA polymerase I at a fxed site in the origin región. YES Weaver KE, Clewell D, An F When compared RepB and RepC of pTE15 with RepB and RepC of pAD1 using Blastp, which previous had been functional study, the similarity for amino acids was approximately 57 and 32%, respectively. Te RepB involved in plasmid copy control and RepC may be involved in stable inheritance. YES
  • 10. CONCLUSION ➢ Gracias a las diferentes técnicas utilizadas en este articulo, pudimos observar las diferentes características del plásmido pTE15 de L reuteri N16 y se pudo clasificar como una clase de tipo theta diferente en los lactobacilos ➢ Es muy importante seguir desarrollando técnicas de laboratorio enfocadas en la biología molecular para continuar con el estudio de moléculas y microorganismos beneficios y patológicos para el cuerpo humano.
  • 11. MAPACONCEPTUAL BACILOS Se dividen en Bacterias que al microscopio se observan en forma de bastón Gram negativas Gram positivas Pueden ser Patógenas Benéficas Tinción purpura o azulada como Bacterias lácticas Excretan vitaminas y prebióticos Mejoran el desarrollo de la microbiota del tracto GI y pueden tener efectos inmunomoduladores Tinción rosa o roja Posee una pared celular gruesa Evita que los glóbulos rojos las ingieran Pueden ser Patógenas Benéficas Suelen ser muy resistentes a los antibióticos
  • 12. PLÁSMIDO Microorganismos microscópicos Bacterias Los científicos usan métodos de ADN recombinante para insertar el plásmido en el gen que se desea estudiar Están separados físicamente del ADN cromosómico Cuando el plásmido se copia a si mismo, también copia el gen insertado Se pueden trasmitir de célula a célula Tienen un numero reducido de genes (algunos son asociados a la resistencia contra antibióticos Molécula pequeña de ADN circular Se encuentra presente en Se replican de manera independiente Los círculos que tienen el ADN clonado se llaman PLÁSMIDOS Los PLÁSMIDOS son una herramienta fundamental de la tecnología del ADN recombinante