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‫الرحيم‬ ‫الرحمن‬ ‫هللا‬ ‫بسم‬
Molecular biology by : A.Elsanjak
Lec 17 :Cell cycle& Cancer
Cell cycle & cell cycle regulation
• Nobel prize 2001 in cell cycle key regulators
• It’s a period of time that extend from the cell comes to
existence (from pre-existing cell) to cell itself divide into 2
daughter cells
• It gives a summarized picture for events that occurs during
cell life and often represent as pie chart
• In eukaryotic cells the cycle consist of two different phases :
mitotic phase “ period spent in division”
interphase “ period between divisions” also called intermitotic
• Cells spend most of their time in the interphase when they
growing ,accumulates nutrients that needed for division
and replicate their DNAs and some of organelles .In other
word the cell prepare to division in this phase
Cell cycle & cell cycle regulation
The interphase is consist of 3 phases
• G1 “ 1ST gap”
• S “synthetic phase”
• G2 “2nd gap”
• They called gaps because
at first we thought that not
much happens in gap periods
but actually incredible growth
and synthetic activities "not
DNA synthesis " take place
• In G1 phase the cell growing and prepares to
DNA replication “ by synthesis of enzymes and
proteins needed for replication …. DNA
polymerase , histones ..etc
• In S phase DNA replication occurs with very low
rate of gene expression
• In G2 phase cell undergoes more growth and
prepare to mitosis “ by synthesizing the
enzymes and proteins needed for mitosis …
microtubules , enzymes that degrade nuclear
membrane… etc
• In M phase the replicated chromosomes
,organelles and cytoplasm separate into 2
daughter cells
What about G0 ?!
G0
• When the cell lack of the requirements of
division or the cell itself non-dividable cell or
haven’t commitment to divide now or it only
divide under specific conditions “ semi non-
dividable” enter a resting phase called “G zero”
• And the cells perform their normal functions
cell cycle regulation
• Nobel prize 2001
• 2 classes of regulatory molecules cyclins and CDKs determine a
cell’s progression through the cycle
• Actually the presence of proper amount of cyclins is determine
cell progression ; because CDKs are constitutively expressed “
housekeeping genes” thus have a constant concentrations , in
contract cyclins are synthesized at specific stages in response to
specific molecular signals
• Cyclins form complexes with CDKs and activate them to
phosphorylates many substrates “either cause activation or
inactivation” ultimately lead to progression in cell cycle
• stages of the cell cycle tend to have different cyclin-CDK
complex
Example for how Cyclin-CDK acts
• When the cell triggered to divide by mitogenic stimuli “GFs” the
level of cyclin D increase , cyclin D then binds to CDK4/6 and
activate it
• Active cyclin-CDK complex phosphorylate many substrates “
either activate or in activate them”
• one of this substrates is Rb protein , Rb is transcription
repressor found normally bound with transcription factor family
E2F , phosphorylation of Rb cause E2F dissociation
• E2F target the transcription of certain genes (histone genes,
DNA replication proteins ), and thus the cell can progress to
DNA synthesis stage
RB
GF
E2F
CDK 46
Cyclin D
Cyclin D
E2F
P
G1S Progression
Rb
DNA polymerases ,histones …etc.
Checkpoints
• Network of proteins that monitor and regulate the cell
cycle progression at different stages
• Simply we can say that ,the cell checks is it proper to
goes to next stage ??? And their are 3 main checkponts
Restriction point
Sophisticated network of proteins involve
in regulation
Overview on Cancer
 Characteristics of cancer
 Causes
 Molecular basis of carcinogenesis
 Some points
• The classic definition of cancer is : uncontrolled cellular
division… will soon result in large masses of rapidly
growing cells “tumor” ,which interfere with normal
physiologic functions of surrounding tissues
• It called cancer because the appearance of tumor with
blood vessels surrounded it ,looks like a carb
Overview on Cancer
• the clinical features of cancer are determined by the
location of cancer ,for example the caner of head of
pancreas Vs breast cancer show different "not completely
different" clinical features
• Cancer is of clonally origin, with a single abnormal cell
multiplying to become a mass of cells forming a tumor
• Development of macroscopic tumor often take several
years
Characteristics of cancer
• Ability to rapid proliferation
• Loss of contact inhibition (in vitro) “ when the normal cells put
in a culture the cells will stop dividing when no more room for
divide, even GFs are added this due to interaction between
surface proteins of neighboring cells this called contact
inhibition”
• however the cancer cells developing insensitivity to anti-growth
signals "in vivo"
• Escape immunosurveillance by secrets large amount of
mucin
• Invade the local tissue
• Metastasis "most serious aspect" which is spreading by
blood or lymphatic vessels and form a secondary tumors in
other places
• Stimulate local angiogenesis , the cancer cells and their
surrounded cells able to secrete angiogenic growth factors
because the low oxygen tensio .
• Self-sufficient in growth signals
Characteristics of cancer
Causes
• In generally cancer is a genetic disorder either caused by
mutations in specific genes , or alternation in gene
expression rates “ non mutational changes” of this specific
genes
• Mutations can be inherited or acquired “ by exposed to
many carcinogens such as chemical agents and radiations”
• Alternations in gene expression can also caused by
carcinogens such as some onco-viruses , and some
chemicals can cause alternations in epigenetic machinery?
It is impossible to summarize the causes of cancer , a lot of
researches in this area , and oncology is a huge field .
However we can say that, the cancer is a genetic disorder can
be inherited or can be acquired by exposure to various of
carcinogens
In general there are 3 classes of carcinogens :
 Radiant energy .(Ultraviolet, x-rays, ʎ rays)
Carcinogenic chemicals.
Oncogenic viruses
Radiant energy
• Such as UV rays , X rays and Gamma rays , the basic
mechanism of carcinogenicity caused by radiation still under
investigation .
• However as we see in the DNA damage and repair ,this
agents can cause a damage in DNA in many ways “like T-T
dimers , strand breaks ….” and this damage can pass as
mutations
• UV rays also induce the formation of Reactive Oxygen
Species
Carcinogenic chemicals
Oncoviruses
• Both DNA and RNA viruses have been identified as being
able to cause cancer in humans
• In general the genetic material of the virus incorporated
into the genome of host cell ,that will results in various
events cancer formation
• DNA viruses often act by down regulating expression of
some tumor suppressor genes such as Rb or inteferes
with gene products of this tumor suppressor genes
• RNA viruses often carry oncogenes ?! in their genomes
Carcinogenesis
• What are those “specific genes” that we were talking
about early ?
• There are 2 main classes of genes involved in
carcinogenesis
• Oncogenes “gas pedal”
• Tumor suppressor genes “brakes”
Oncogenes
• Derived from proto-oncogenes ,which are normal genes
encoded for products that trigger cell to divide “products
....not proteins only because some miRNAs seen as
proto-oncogenes”
If proto-oncogenes exposed to mutations that can make
them “hyperactive” or there were over-expression in this
genes ,they will transform to oncogenes,and the cell will
divide with abnormal rates
Proto-oncogenes examples
• Hyperactive GFs ,their receptors and their signal
transduction molecules can lead to cell division
• Hyperactive +ve cell cycle regulators such as cyclin D1
CDK4/6 ….etc
• Others
• Therefore genes of those above considered as proto-
oncogenes
EGF pathway as a model
Over-expression of EGF receptors and it
ligands found in several human carcinomas
Loss of intrinsic GTPase activity of Ras
makes it unable to swich off
Ras
• Family of genes encoded for small G-protein kinase active
with GTP ,inactive with GDP , phosphorylates down strem
substrates
• it has intrinsic GTPase activity to terminate it own action
• If this GTPase activity lost by a mutation the Ras protein
become hyperactive
About 20% of oncogenes are oncogenic
TFs
Note
• Oncogenes act in a dominant manner
• i.g ….if one mutated allele of Ras is presence"one
defected Ras protein presence" that will enough to cause
abnormal cellular division
Activation of oncogenes
Tumor suppressor genes
• Here this genes produce products “ also some miRNAs”
that normally suppress the cell cycle , if the inhibitory
effect is lost or diminished .. the cell would be like a car
without breaks
• The most studied tumor suppressor genes are Rb and
P53
P53 ‘guardian of the genome’
Gene encoded for protein with Mw= 53 kDA
• P53 protein is a Transcription factor activates many genes
related to DNA repair , cell cycle delay and also apoptosis
p53
• It response to DNA damage and other factors
• When the DNA damaged p53 activates genes
related to DNA repair
• If damage bigger p53 activates genes lead to
delay cell cycle such as p21 which a potent cyclin-CDK
inhibitor
• If the damage extensive activates genes induce the
apoptosis
• Resist any trial to changing the normal DNA “guardian”
• P53 is one of the most frequently mutated genes in
human cancers.
• We can say , it the cancer’s natural enemy
Some differences between oncogenes &
Tumor suppressor genes:-
Proprites of some proto-oncogenes and
tumer suppressor genes
Note
• A Failure either in DNA repair or apoptosis may involved
in developing and/or development of cancer cell ,
because failure in this mechanisms allow damages "and
subsequently mutations" to accumulate ,and this is a
supportive environment for cancer cell
Epigenetic changes are increasingly being
recognized in cancer
• Epigenetic factors are those factors who alter the gene
expression without alter underlying genome " epigenetic =
above the genome" such as DNA methylation, PTMs of
histones and chromosomal remodeling which they can
turn on/off the transcription
Fundamental features of carcinogenesis:-
Nonlethal genetic damage is the initiating event in
carcinogenesis, four classes of genes, when affected , can result
in the development of a tumor.
1. Proto-oncogenes.
2. Tumor suppressor genes.
3. Genes involved in DNA repair
4. Genes involved in apoptosis.
 Cancer is of clonally origin, with a single abnormal cell
multiplying to become a mass of cells forming a tumor.
 Carcinogenesis is a multistep process, with multiple genetic
alterations occurring in cells, transforming normal cells into
malignant ones.
 Tumor often takes several years to develop.
Cancer is a huge field and we
aren’t oncologists
We are modest 2nd year medical
students
Molecular biology course by : Ahmed Elsanjak
Faculty of Medicine EAEU
5TH Batch
‫تنويهات‬
•
‫عن‬ ‫بديال‬ ‫ليس‬ ‫التقديمي‬ ‫العرض‬ ‫هذا‬
«
‫شيتات‬
»
‫الكليه‬
.
•
‫إالمتحان‬ ‫أسئلة‬ ‫عن‬ ‫اإلجابه‬ ‫التقديمي‬ ‫العرض‬ ‫هذا‬ ‫من‬ ‫الدراسه‬ ‫عند‬ ‫نضمن‬ ‫ال‬
.
•
‫ل‬ ‫بديل‬ ‫ال‬
«
‫شيتات‬
»
‫الكلية‬ ‫مصدر‬ ‫او‬
.
•
‫اإلمالئيه‬ ‫اللغوية‬ ‫األخطاء‬ ‫عن‬ ‫نعتذر‬
.
•
‫رذتعن‬
‫نع‬
‫يا‬
‫ءاطخأ‬
‫هيملع‬
"‫نإ‬
‫"تدجو‬

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Cell cycle and Cancer biochemistry .pptx

  • 1. ‫الرحيم‬ ‫الرحمن‬ ‫هللا‬ ‫بسم‬ Molecular biology by : A.Elsanjak Lec 17 :Cell cycle& Cancer
  • 2. Cell cycle & cell cycle regulation • Nobel prize 2001 in cell cycle key regulators • It’s a period of time that extend from the cell comes to existence (from pre-existing cell) to cell itself divide into 2 daughter cells • It gives a summarized picture for events that occurs during cell life and often represent as pie chart • In eukaryotic cells the cycle consist of two different phases : mitotic phase “ period spent in division” interphase “ period between divisions” also called intermitotic
  • 3. • Cells spend most of their time in the interphase when they growing ,accumulates nutrients that needed for division and replicate their DNAs and some of organelles .In other word the cell prepare to division in this phase Cell cycle & cell cycle regulation
  • 4.
  • 5. The interphase is consist of 3 phases • G1 “ 1ST gap” • S “synthetic phase” • G2 “2nd gap” • They called gaps because at first we thought that not much happens in gap periods but actually incredible growth and synthetic activities "not DNA synthesis " take place
  • 6. • In G1 phase the cell growing and prepares to DNA replication “ by synthesis of enzymes and proteins needed for replication …. DNA polymerase , histones ..etc • In S phase DNA replication occurs with very low rate of gene expression • In G2 phase cell undergoes more growth and prepare to mitosis “ by synthesizing the enzymes and proteins needed for mitosis … microtubules , enzymes that degrade nuclear membrane… etc • In M phase the replicated chromosomes ,organelles and cytoplasm separate into 2 daughter cells What about G0 ?!
  • 7. G0 • When the cell lack of the requirements of division or the cell itself non-dividable cell or haven’t commitment to divide now or it only divide under specific conditions “ semi non- dividable” enter a resting phase called “G zero” • And the cells perform their normal functions
  • 8. cell cycle regulation • Nobel prize 2001 • 2 classes of regulatory molecules cyclins and CDKs determine a cell’s progression through the cycle • Actually the presence of proper amount of cyclins is determine cell progression ; because CDKs are constitutively expressed “ housekeeping genes” thus have a constant concentrations , in contract cyclins are synthesized at specific stages in response to specific molecular signals • Cyclins form complexes with CDKs and activate them to phosphorylates many substrates “either cause activation or inactivation” ultimately lead to progression in cell cycle
  • 9. • stages of the cell cycle tend to have different cyclin-CDK complex
  • 10. Example for how Cyclin-CDK acts • When the cell triggered to divide by mitogenic stimuli “GFs” the level of cyclin D increase , cyclin D then binds to CDK4/6 and activate it • Active cyclin-CDK complex phosphorylate many substrates “ either activate or in activate them” • one of this substrates is Rb protein , Rb is transcription repressor found normally bound with transcription factor family E2F , phosphorylation of Rb cause E2F dissociation • E2F target the transcription of certain genes (histone genes, DNA replication proteins ), and thus the cell can progress to DNA synthesis stage
  • 11. RB GF E2F CDK 46 Cyclin D Cyclin D E2F P G1S Progression Rb DNA polymerases ,histones …etc.
  • 12. Checkpoints • Network of proteins that monitor and regulate the cell cycle progression at different stages • Simply we can say that ,the cell checks is it proper to goes to next stage ??? And their are 3 main checkponts Restriction point
  • 13. Sophisticated network of proteins involve in regulation
  • 14. Overview on Cancer  Characteristics of cancer  Causes  Molecular basis of carcinogenesis  Some points
  • 15. • The classic definition of cancer is : uncontrolled cellular division… will soon result in large masses of rapidly growing cells “tumor” ,which interfere with normal physiologic functions of surrounding tissues • It called cancer because the appearance of tumor with blood vessels surrounded it ,looks like a carb Overview on Cancer
  • 16. • the clinical features of cancer are determined by the location of cancer ,for example the caner of head of pancreas Vs breast cancer show different "not completely different" clinical features • Cancer is of clonally origin, with a single abnormal cell multiplying to become a mass of cells forming a tumor • Development of macroscopic tumor often take several years
  • 17. Characteristics of cancer • Ability to rapid proliferation • Loss of contact inhibition (in vitro) “ when the normal cells put in a culture the cells will stop dividing when no more room for divide, even GFs are added this due to interaction between surface proteins of neighboring cells this called contact inhibition” • however the cancer cells developing insensitivity to anti-growth signals "in vivo"
  • 18. • Escape immunosurveillance by secrets large amount of mucin • Invade the local tissue • Metastasis "most serious aspect" which is spreading by blood or lymphatic vessels and form a secondary tumors in other places • Stimulate local angiogenesis , the cancer cells and their surrounded cells able to secrete angiogenic growth factors because the low oxygen tensio . • Self-sufficient in growth signals Characteristics of cancer
  • 19. Causes • In generally cancer is a genetic disorder either caused by mutations in specific genes , or alternation in gene expression rates “ non mutational changes” of this specific genes • Mutations can be inherited or acquired “ by exposed to many carcinogens such as chemical agents and radiations” • Alternations in gene expression can also caused by carcinogens such as some onco-viruses , and some chemicals can cause alternations in epigenetic machinery?
  • 20. It is impossible to summarize the causes of cancer , a lot of researches in this area , and oncology is a huge field . However we can say that, the cancer is a genetic disorder can be inherited or can be acquired by exposure to various of carcinogens In general there are 3 classes of carcinogens :  Radiant energy .(Ultraviolet, x-rays, ʎ rays) Carcinogenic chemicals. Oncogenic viruses
  • 21. Radiant energy • Such as UV rays , X rays and Gamma rays , the basic mechanism of carcinogenicity caused by radiation still under investigation . • However as we see in the DNA damage and repair ,this agents can cause a damage in DNA in many ways “like T-T dimers , strand breaks ….” and this damage can pass as mutations • UV rays also induce the formation of Reactive Oxygen Species
  • 23. Oncoviruses • Both DNA and RNA viruses have been identified as being able to cause cancer in humans • In general the genetic material of the virus incorporated into the genome of host cell ,that will results in various events cancer formation • DNA viruses often act by down regulating expression of some tumor suppressor genes such as Rb or inteferes with gene products of this tumor suppressor genes • RNA viruses often carry oncogenes ?! in their genomes
  • 24. Carcinogenesis • What are those “specific genes” that we were talking about early ? • There are 2 main classes of genes involved in carcinogenesis • Oncogenes “gas pedal” • Tumor suppressor genes “brakes”
  • 25. Oncogenes • Derived from proto-oncogenes ,which are normal genes encoded for products that trigger cell to divide “products ....not proteins only because some miRNAs seen as proto-oncogenes” If proto-oncogenes exposed to mutations that can make them “hyperactive” or there were over-expression in this genes ,they will transform to oncogenes,and the cell will divide with abnormal rates
  • 26. Proto-oncogenes examples • Hyperactive GFs ,their receptors and their signal transduction molecules can lead to cell division • Hyperactive +ve cell cycle regulators such as cyclin D1 CDK4/6 ….etc • Others • Therefore genes of those above considered as proto- oncogenes
  • 27. EGF pathway as a model
  • 28. Over-expression of EGF receptors and it ligands found in several human carcinomas
  • 29. Loss of intrinsic GTPase activity of Ras makes it unable to swich off
  • 30. Ras • Family of genes encoded for small G-protein kinase active with GTP ,inactive with GDP , phosphorylates down strem substrates • it has intrinsic GTPase activity to terminate it own action • If this GTPase activity lost by a mutation the Ras protein become hyperactive
  • 31. About 20% of oncogenes are oncogenic TFs
  • 32. Note • Oncogenes act in a dominant manner • i.g ….if one mutated allele of Ras is presence"one defected Ras protein presence" that will enough to cause abnormal cellular division
  • 34. Tumor suppressor genes • Here this genes produce products “ also some miRNAs” that normally suppress the cell cycle , if the inhibitory effect is lost or diminished .. the cell would be like a car without breaks • The most studied tumor suppressor genes are Rb and P53
  • 35. P53 ‘guardian of the genome’ Gene encoded for protein with Mw= 53 kDA • P53 protein is a Transcription factor activates many genes related to DNA repair , cell cycle delay and also apoptosis p53
  • 36. • It response to DNA damage and other factors • When the DNA damaged p53 activates genes related to DNA repair • If damage bigger p53 activates genes lead to delay cell cycle such as p21 which a potent cyclin-CDK inhibitor • If the damage extensive activates genes induce the apoptosis • Resist any trial to changing the normal DNA “guardian”
  • 37. • P53 is one of the most frequently mutated genes in human cancers. • We can say , it the cancer’s natural enemy
  • 38. Some differences between oncogenes & Tumor suppressor genes:-
  • 39. Proprites of some proto-oncogenes and tumer suppressor genes
  • 40. Note • A Failure either in DNA repair or apoptosis may involved in developing and/or development of cancer cell , because failure in this mechanisms allow damages "and subsequently mutations" to accumulate ,and this is a supportive environment for cancer cell
  • 41. Epigenetic changes are increasingly being recognized in cancer • Epigenetic factors are those factors who alter the gene expression without alter underlying genome " epigenetic = above the genome" such as DNA methylation, PTMs of histones and chromosomal remodeling which they can turn on/off the transcription
  • 42. Fundamental features of carcinogenesis:- Nonlethal genetic damage is the initiating event in carcinogenesis, four classes of genes, when affected , can result in the development of a tumor. 1. Proto-oncogenes. 2. Tumor suppressor genes. 3. Genes involved in DNA repair 4. Genes involved in apoptosis.  Cancer is of clonally origin, with a single abnormal cell multiplying to become a mass of cells forming a tumor.  Carcinogenesis is a multistep process, with multiple genetic alterations occurring in cells, transforming normal cells into malignant ones.  Tumor often takes several years to develop.
  • 43. Cancer is a huge field and we aren’t oncologists We are modest 2nd year medical students
  • 44. Molecular biology course by : Ahmed Elsanjak Faculty of Medicine EAEU 5TH Batch
  • 45.
  • 46. ‫تنويهات‬ • ‫عن‬ ‫بديال‬ ‫ليس‬ ‫التقديمي‬ ‫العرض‬ ‫هذا‬ « ‫شيتات‬ » ‫الكليه‬ . • ‫إالمتحان‬ ‫أسئلة‬ ‫عن‬ ‫اإلجابه‬ ‫التقديمي‬ ‫العرض‬ ‫هذا‬ ‫من‬ ‫الدراسه‬ ‫عند‬ ‫نضمن‬ ‫ال‬ . • ‫ل‬ ‫بديل‬ ‫ال‬ « ‫شيتات‬ » ‫الكلية‬ ‫مصدر‬ ‫او‬ . • ‫اإلمالئيه‬ ‫اللغوية‬ ‫األخطاء‬ ‫عن‬ ‫نعتذر‬ . • ‫رذتعن‬ ‫نع‬ ‫يا‬ ‫ءاطخأ‬ ‫هيملع‬ "‫نإ‬ ‫"تدجو‬