Bioinfomatics Presentation

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Zhenhong Bao

Business Technology

Induced Pluripotent Stem Cell Lines Derived from Human Somatic Cells ,[object Object],[object Object],[object Object],[object Object]

OCT4 ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Answer ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

SOX2 ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Answer ,[object Object],[object Object],[object Object],[object Object],[object Object]

NANOG ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Infoseq ,[object Object],[object Object],[object Object],[object Object],[object Object]

dottup ,[object Object],Word Size = 10 Word Size = 20

Plotorf/getorf ,[object Object],[object Object]

Transeq ,[object Object],[object Object],[object Object],[object Object]

LIN28 ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]

Blast ,[object Object],[object Object],[object Object],[object Object]

Conserved Domain Database (CDD) ,[object Object],[object Object],[object Object]

Taxonomy Report ,[object Object],[object Object],[object Object]

CD from mouse protein ,[object Object],[object Object],[object Object],[object Object]

Literatures ,[object Object],[object Object],[object Object],[object Object]

What's hot

BIOL335: RNA bioinformatics

Paul Gardner

Pathema Burkholderia Annotation Jamboree: Prokaryotic Annotation Overview

Pathema

There are plenty specific types of data which are needed to compress for easy storage and to reduce overall retrieval times. Moreover, compressed sequence can be used to understand similarities between biological sequences. DNA data compression challenge has become a major task for many researchers for the last few years as a result of exponential increase of produced sequences in gene databases. In this research paper we have attempt to develop an algorithm by self-reference bases; namely Single Base Variable Repeat Length DNA Compression (SBVRLDNAComp). There are a number of reference based compression methods but they are not satisfactory for forthcoming new species. SBVRLDNAComp is an optimal solution of the result obtained from small to long, uniform identical and non-identical string of nucleotides checked in four different ways. Both exact repetitive and non-repetitive bases are compressed by SBVRLDNAComp.The sound part of it is without any reference database BVRLDNAComp achieves 1.70 to 1.73 compression ratio α after testing on ten benchmark DNA sequences. The compressed file can be further compressed with standard tools (such as WinZip or WinRar) but even without this SBVRLDNAComp outperforms many standard DNA compression algorithms.

SBVRLDNACOMP:AN EFFECTIVE DNA SEQUENCE COMPRESSION ALGORITHM

ijcsa

Structural Mechanism for the Fidelity Modulation of DNA Polymerase λ

Mu-Sen Liu

2 md2016 annotation

Scott Dawson

Does RNA avoidance dictate protein expression level?

Paul Gardner

Tyler functional annotation thurs 1120

Sucheta Tripathy

SHSARP paper final

Kaylee Racs

Basler modellers.210126reduced

Olivier Bignucolo

Mutation illustration

group42hour

Mutation illustration

group42hour

Alberto Kornblihtt-Enfermedades raras de la piel

Fundación Ramón Areces

Examining gene expression and methylation with next gen sequencing

Stephen Turner

Docking & Designing Small Molecules within Rosetta Code Framework

Gordon Lemmon

Engineered histone acetylation using DNA-binding domains (DBD), chemical ind...

Feynman Liang

Systematic detection of internal symmetry in proteins - Rheinknie Regiomeetin...

Spencer Bliven

What's hot (16)

BIOL335: RNA bioinformatics

Pathema Burkholderia Annotation Jamboree: Prokaryotic Annotation Overview

SBVRLDNACOMP:AN EFFECTIVE DNA SEQUENCE COMPRESSION ALGORITHM

Structural Mechanism for the Fidelity Modulation of DNA Polymerase λ

2 md2016 annotation

Does RNA avoidance dictate protein expression level?

Tyler functional annotation thurs 1120

SHSARP paper final

Basler modellers.210126reduced

Mutation illustration

Alberto Kornblihtt-Enfermedades raras de la piel

Examining gene expression and methylation with next gen sequencing

Docking & Designing Small Molecules within Rosetta Code Framework

Engineered histone acetylation using DNA-binding domains (DBD), chemical ind...

Systematic detection of internal symmetry in proteins - Rheinknie Regiomeetin...

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