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Fluorescence, Phosphorescence, 
& Chemiluminescence
Fluorescence, Phosphorescence, & Chemiluminescence 
A) Introduction 
1.) Theory of Fluorescence and Phosphorescence: 
10-14 to 10-15 s 
10-5 to 10-8 s fluorescence 
10-4 to 10s phosphorescence 
10-8 – 10-9s 
M*  M + heat 
- Excitation of e- by absorbance of hn. 
- Re-emission of hn as e- goes to ground state. 
- Use hn2 for qualitative and quantitative analysis
Fluorescence, Phosphorescence, & Chemiluminescence 
A) Introduction 
1.) Teori Fluorescence dan Phosphorescence: 
Metode limit deteksi 
(mol) 
Konsentrsi 
limit deteksi 
(molar) 
Advantages 
UV-Vis 10-13 to 10-16 10-5 to 10-8 Universal 
fluorescence 10-15 to 10-17 10-7 to 10-9 Sensitive 
For UV/Vis need to observe Po and 
P difference, which limits detection 
For fluorescence, only observe 
amount of PL
2.) Fluorescence – dari ground state ke posisi single dan kembali. 
Phosphorescence - dari ground state ke posisitriplet dan kembali. 
Spins paired 
No net magnetic field 
Spins unpaired 
net magnetic field 
10-5 to 10-8 s 
10-4 to 10 s 
Fluorescence Phosphorescence 
0 sec 1 sec 640 sec 
Contoh 
Phosphorescence
3) Diagram Energi Jablonski 
S2, S1 = Singlet States 
Numerous vibrational energy levels for each electronic state 
Radiasi Resonansi - reemissi pada l sama 
Biasanya reemisi pada l lebih tinggi (energi rendah) 
Transisi terlarang: no direct excitation of triplet state 
because change in multiplicity –selection rules. 
T1 = Triplet State
4.) Deactivation Processes: 
a) vibrational relaxation: solvent collisions 
- vibrational relaxation is efficient and goes to lowest vibrational level of 
electronic state within 10-12s or less. 
- significantly shorter life-time then electronically excited state 
- fluorescence occurs from lowest vibrational level of electronic excited 
state, but can go to higher vibrational state of ground level. 
- dissociation: excitation to vibrational state with enough 
energy to break a bond 
- predissociation: relaxation to vibrational state with enough 
energy to break a bond
4.) Deactivation Processes: 
b) internal conversion: not well understood 
- crossing of e- to lower electronic state. 
- efficient since many compounds don’t fluoresce 
- especially probable if vibrational levels of two electronic states 
overlap, can lead to predissociation or dissociation.
4.) Deactivation Processes: 
c) external conversion: deactivation via collision with solvent (collisional quenching) 
- decrease collision  increase fluorescence or phosphorescence 
‚ decrease temperature and/or increase viscosity 
‚ decrease concentration of quenching (Q) agent. 
Quenching of Ru(II) Luminescence by O2
4.) Deactivation Processes: 
d) intersystem crossing: spin of electron is reversed 
- change in multiplicity in molecule occurs (singlet to triplet) 
- enhanced if vibrational levels overlap 
- more common if molecule contains heavy atoms (I, Br) 
- more common in presence of paramagnetic species (O2)
5.) Quantum Yield (f): ratio of the number of molecules that luminesce to the total 
number of excited molecules. 
- determined by the relative rate constants (kx) of deactivation 
processes 
f  = kf 
kf + ki + kec+ kic + kpd + kd 
f: fluorescence I: intersystem crossing 
ec: external conversion ic: internal conversion 
pd: predissociation d: dissociation 
Increase quantum yield by decreasing factors that promote other processes 
Fluorescence probes measuring 
quantity of protein in a cell
6.) Types of Transitions: 
- seldom occurs from absorbance less 
than 250 nm 
‚ 200 nm => 600 kJ/mol, breaks many bonds 
- fluorescence not seen with s*  s 
- typically p*  p or n p*
7.) Fluorescence & Structure: 
- usually aromatic compounds 
‚ low energy of p p* transition 
‚ quantum yield increases with number of rings and 
degree of condensation. 
‚ fluorescence especially favored for rigid structures 
fluorescence increase for chelating agent 
bound to metal. 
N HN 
H2 
C 
N 
O 
Zn 
2 
EExxaammpplleess ooff fflluuoorreesscceenntt ccoommppoouunnddss:: 
quinoline indole fluorene 8-hydroxyquinoline
8.) Temperature, Solvent & pH Effects: 
- decrease temperature  increase fluorescence 
- increase viscosity  increase fluorescence 
- fluorescence is pH dependent for compounds with acidic/basic 
substituents. 
‚ more resonance forms stabilize excited state. 
H H 
N 
H H 
N 
H H 
N 
resonance forms of aniline 
FFlluuoorreesscceennccee ppHH TTiittrraattiioonn
9.) Effect of Dissolved O2: 
- increase [O2]  decrease fluorescence 
‚ oxidize compound 
‚ paramagnetic property increase intersystem 
crossing (spin flipping) 
Change in fluorescence as a function of cellular oxygen 
Am J Physiol Cell Physiol 291: C781–C787, 2006.
B) Effect of Concentration on Fluorescence or Phosphorescence 
power of fluorescence emission: (F) = K’Po(1 – 10 –ebc) 
K’ ~ f (quantum yield) 
Po: power of beam 
ebc: Beer’s law 
F depends on absorbance of light and incident intensity (Po) 
At low concentrations: F = 2.3K’ebcPo 
deviations at higher concentrations 
can be attributed to absorbance becoming 
a significant factor and by self-quenching 
or self-absorption. 
FFlluuoorreesscceennccee ooff ccrruuddee ooiill
C) Fluorescence Spectra 
Excitation Spectra (a) – measure fluorescence or 
phosphorescence at a fixed wavelength 
while varying the excitation wavelength. 
Emission Spectra (b) – measure fluorescence or 
phosphorescence over a range of 
wavelengths using a fixed excitation wavelength. 
Phosphorescence bands are uussuuaallllyy ffoouunndd aatt lloonnggeerr 
((>>l)) tthheenn fflluuoorreesscceennccee bbeeccaauussee eexxcciitteedd ttrriippllee ssttaattee iiss 
lloowweerr eenneerrggyy tthheenn eexxcciitteedd ssiinngglleett ssttaattee..
D) Instrumentation 
- basic design 
‚ components similar to UV/Vis 
‚ spectrofluorometers: observe 
both excitation & emission spectra. 
- extra features for phosphorescence 
‚ sample cell in cooled Dewar flask with liquid nitrogen 
‚ delay between excitation and emission
Fluorometers 
- simple, rugged, low cost, compact 
- source beam split into reference and sample beam 
- reference beam attenuated ~ fluorescence intensity 
A-1 filter fluorometer
Spectrofluorometer 
- both excitation and emmision spectra 
- two grating monochromators 
- quantitative analysis 
Perkin-Elmer 204
E) Application of Fluorescence 
- detect inorganic species by chelating ion 
Ion Reagent Absorption (nm) Fluorescence (nm) Sensitivity (mg/ml) Interference 
Al3+ Alizarin garnet R 470 500 0.007 
Be, Co, Cr, Cu, 
F-,NO3-, Ni, PO4 
-3, 
Th, Zr 
F- Al complex of Alizarin 
garnet R (quenching) 470 500 0.001 
Be, Co, Cr, Cu, 
F-,Fe, Ni,PO4-3, 
Th, Zr 
B4O7 
2- Benzoin 370 450 0.04 Be, Sb 
benzoxazole 365 Blue 2 NH3 
Cd2+ 2-(0-Hydroxyphenyl)- 
Li+ 8-Hydroxyquinoline 370 580 0.2 Mg 
Sn4+ Flavanol 400 470 0.1 F-, PO4 
3-, Zr 
Zn2+ Benzoin - green 10 B, Be, Sb, 
colored ions 
N 
OH 
O 
O 
OH 
OH 
HO N N 
HO 
SO3Na 
O 
C 
OH 
C 
H 
8-Hydroxyquinoline flavanol alizarin garnet R benzoin
F) Chemiluminescence 
- chemical reaction yields an electronically excited species that emits 
light as it returns to ground state. 
- relatively new, few examples 
A + B  C*  C + hn 
	 	Examples: 
NH2 O 
C 
NH 
NH 
C 
O 
O2/OH-NH2 
COO-COO- 
+ hn + N2 + H2O 
1) Chemical systems 
- Luminol (used to detect blood) 
- phenyl oxalate ester (glow sticks)
2) Biochemical systems 
- Luciferase (Firefly enzyme) 
Luciferin + O2 
Luciferase 
O O 
O C 
C R2 
R1 
Spontaneous 
CO2 + O C* 
R2 
R1 
Light 
N 
S 
HO N 
S 
O 
HO 
Luciferin (firefly) 
“Glowing” Plants 
Luciferase gene cloned into plants
CCoonnttoohh sseennyyaawwaa
Compounds Wavelength of range of 
maximum fluorescence 
(nm) 
Aromatic hydrocarbon 
naphthalene 
Anthracene 
Pyrene 
1-Benzopyrene 
300-365 
370-460 
370-400 
400-450 
Heterocyclic compound 
Quinoline 
Quinoline sulfate 
380-490 
400-500 
Coenzyme 
Adenine 
Adenozine triphosphate 
380 
390 
Drugs 
Aspirin 
Codeine 
Phenobarbital 
Procaine 
335 
350 
440 
345
Compounds Wavelength of range of 
maximum fluorescence 
(nm) 
Steroids 
Aldosterone 
Cortisone 
Prednisolone 
Testersterone 
400-450 
580 
570 
580 
Vitamins 
Riboflavin (B 2) 
Cyanocobalamin (B 12) 
Tocopherol (E) 
565 
305 
340 
Coenzyme 
Adenine 
Adenozine triphosphate 
380 
390 
Dye 
Fluorescene 
Methylene blue 
510-590 
650-700

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Fluoresen dan posporesen

  • 2. Fluorescence, Phosphorescence, & Chemiluminescence A) Introduction 1.) Theory of Fluorescence and Phosphorescence: 10-14 to 10-15 s 10-5 to 10-8 s fluorescence 10-4 to 10s phosphorescence 10-8 – 10-9s M*  M + heat - Excitation of e- by absorbance of hn. - Re-emission of hn as e- goes to ground state. - Use hn2 for qualitative and quantitative analysis
  • 3. Fluorescence, Phosphorescence, & Chemiluminescence A) Introduction 1.) Teori Fluorescence dan Phosphorescence: Metode limit deteksi (mol) Konsentrsi limit deteksi (molar) Advantages UV-Vis 10-13 to 10-16 10-5 to 10-8 Universal fluorescence 10-15 to 10-17 10-7 to 10-9 Sensitive For UV/Vis need to observe Po and P difference, which limits detection For fluorescence, only observe amount of PL
  • 4. 2.) Fluorescence – dari ground state ke posisi single dan kembali. Phosphorescence - dari ground state ke posisitriplet dan kembali. Spins paired No net magnetic field Spins unpaired net magnetic field 10-5 to 10-8 s 10-4 to 10 s Fluorescence Phosphorescence 0 sec 1 sec 640 sec Contoh Phosphorescence
  • 5. 3) Diagram Energi Jablonski S2, S1 = Singlet States Numerous vibrational energy levels for each electronic state Radiasi Resonansi - reemissi pada l sama Biasanya reemisi pada l lebih tinggi (energi rendah) Transisi terlarang: no direct excitation of triplet state because change in multiplicity –selection rules. T1 = Triplet State
  • 6. 4.) Deactivation Processes: a) vibrational relaxation: solvent collisions - vibrational relaxation is efficient and goes to lowest vibrational level of electronic state within 10-12s or less. - significantly shorter life-time then electronically excited state - fluorescence occurs from lowest vibrational level of electronic excited state, but can go to higher vibrational state of ground level. - dissociation: excitation to vibrational state with enough energy to break a bond - predissociation: relaxation to vibrational state with enough energy to break a bond
  • 7. 4.) Deactivation Processes: b) internal conversion: not well understood - crossing of e- to lower electronic state. - efficient since many compounds don’t fluoresce - especially probable if vibrational levels of two electronic states overlap, can lead to predissociation or dissociation.
  • 8. 4.) Deactivation Processes: c) external conversion: deactivation via collision with solvent (collisional quenching) - decrease collision  increase fluorescence or phosphorescence ‚ decrease temperature and/or increase viscosity ‚ decrease concentration of quenching (Q) agent. Quenching of Ru(II) Luminescence by O2
  • 9. 4.) Deactivation Processes: d) intersystem crossing: spin of electron is reversed - change in multiplicity in molecule occurs (singlet to triplet) - enhanced if vibrational levels overlap - more common if molecule contains heavy atoms (I, Br) - more common in presence of paramagnetic species (O2)
  • 10. 5.) Quantum Yield (f): ratio of the number of molecules that luminesce to the total number of excited molecules. - determined by the relative rate constants (kx) of deactivation processes f = kf kf + ki + kec+ kic + kpd + kd f: fluorescence I: intersystem crossing ec: external conversion ic: internal conversion pd: predissociation d: dissociation Increase quantum yield by decreasing factors that promote other processes Fluorescence probes measuring quantity of protein in a cell
  • 11. 6.) Types of Transitions: - seldom occurs from absorbance less than 250 nm ‚ 200 nm => 600 kJ/mol, breaks many bonds - fluorescence not seen with s*  s - typically p*  p or n p*
  • 12. 7.) Fluorescence & Structure: - usually aromatic compounds ‚ low energy of p p* transition ‚ quantum yield increases with number of rings and degree of condensation. ‚ fluorescence especially favored for rigid structures fluorescence increase for chelating agent bound to metal. N HN H2 C N O Zn 2 EExxaammpplleess ooff fflluuoorreesscceenntt ccoommppoouunnddss:: quinoline indole fluorene 8-hydroxyquinoline
  • 13. 8.) Temperature, Solvent & pH Effects: - decrease temperature  increase fluorescence - increase viscosity  increase fluorescence - fluorescence is pH dependent for compounds with acidic/basic substituents. ‚ more resonance forms stabilize excited state. H H N H H N H H N resonance forms of aniline FFlluuoorreesscceennccee ppHH TTiittrraattiioonn
  • 14. 9.) Effect of Dissolved O2: - increase [O2]  decrease fluorescence ‚ oxidize compound ‚ paramagnetic property increase intersystem crossing (spin flipping) Change in fluorescence as a function of cellular oxygen Am J Physiol Cell Physiol 291: C781–C787, 2006.
  • 15. B) Effect of Concentration on Fluorescence or Phosphorescence power of fluorescence emission: (F) = K’Po(1 – 10 –ebc) K’ ~ f (quantum yield) Po: power of beam ebc: Beer’s law F depends on absorbance of light and incident intensity (Po) At low concentrations: F = 2.3K’ebcPo deviations at higher concentrations can be attributed to absorbance becoming a significant factor and by self-quenching or self-absorption. FFlluuoorreesscceennccee ooff ccrruuddee ooiill
  • 16. C) Fluorescence Spectra Excitation Spectra (a) – measure fluorescence or phosphorescence at a fixed wavelength while varying the excitation wavelength. Emission Spectra (b) – measure fluorescence or phosphorescence over a range of wavelengths using a fixed excitation wavelength. Phosphorescence bands are uussuuaallllyy ffoouunndd aatt lloonnggeerr ((>>l)) tthheenn fflluuoorreesscceennccee bbeeccaauussee eexxcciitteedd ttrriippllee ssttaattee iiss lloowweerr eenneerrggyy tthheenn eexxcciitteedd ssiinngglleett ssttaattee..
  • 17. D) Instrumentation - basic design ‚ components similar to UV/Vis ‚ spectrofluorometers: observe both excitation & emission spectra. - extra features for phosphorescence ‚ sample cell in cooled Dewar flask with liquid nitrogen ‚ delay between excitation and emission
  • 18. Fluorometers - simple, rugged, low cost, compact - source beam split into reference and sample beam - reference beam attenuated ~ fluorescence intensity A-1 filter fluorometer
  • 19. Spectrofluorometer - both excitation and emmision spectra - two grating monochromators - quantitative analysis Perkin-Elmer 204
  • 20. E) Application of Fluorescence - detect inorganic species by chelating ion Ion Reagent Absorption (nm) Fluorescence (nm) Sensitivity (mg/ml) Interference Al3+ Alizarin garnet R 470 500 0.007 Be, Co, Cr, Cu, F-,NO3-, Ni, PO4 -3, Th, Zr F- Al complex of Alizarin garnet R (quenching) 470 500 0.001 Be, Co, Cr, Cu, F-,Fe, Ni,PO4-3, Th, Zr B4O7 2- Benzoin 370 450 0.04 Be, Sb benzoxazole 365 Blue 2 NH3 Cd2+ 2-(0-Hydroxyphenyl)- Li+ 8-Hydroxyquinoline 370 580 0.2 Mg Sn4+ Flavanol 400 470 0.1 F-, PO4 3-, Zr Zn2+ Benzoin - green 10 B, Be, Sb, colored ions N OH O O OH OH HO N N HO SO3Na O C OH C H 8-Hydroxyquinoline flavanol alizarin garnet R benzoin
  • 21. F) Chemiluminescence - chemical reaction yields an electronically excited species that emits light as it returns to ground state. - relatively new, few examples A + B  C*  C + hn Examples: NH2 O C NH NH C O O2/OH-NH2 COO-COO- + hn + N2 + H2O 1) Chemical systems - Luminol (used to detect blood) - phenyl oxalate ester (glow sticks)
  • 22. 2) Biochemical systems - Luciferase (Firefly enzyme) Luciferin + O2 Luciferase O O O C C R2 R1 Spontaneous CO2 + O C* R2 R1 Light N S HO N S O HO Luciferin (firefly) “Glowing” Plants Luciferase gene cloned into plants
  • 24. Compounds Wavelength of range of maximum fluorescence (nm) Aromatic hydrocarbon naphthalene Anthracene Pyrene 1-Benzopyrene 300-365 370-460 370-400 400-450 Heterocyclic compound Quinoline Quinoline sulfate 380-490 400-500 Coenzyme Adenine Adenozine triphosphate 380 390 Drugs Aspirin Codeine Phenobarbital Procaine 335 350 440 345
  • 25. Compounds Wavelength of range of maximum fluorescence (nm) Steroids Aldosterone Cortisone Prednisolone Testersterone 400-450 580 570 580 Vitamins Riboflavin (B 2) Cyanocobalamin (B 12) Tocopherol (E) 565 305 340 Coenzyme Adenine Adenozine triphosphate 380 390 Dye Fluorescene Methylene blue 510-590 650-700

Editor's Notes

  1. Deaktivasi melalui tumbukan dengan pelarut (pemadaman dengan tumbukan) Penurunan junlah tumbukan meningkatkan fluoresen dan posporesen Menurunkan temperatur dan atau menaikkan viskositas Menurunkan konsentrasi dari reagen yang dapat memadamkan