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Copyright © 2013 Pearson Education, Inc.
Lectures prepared by Christine L. Case
Chapter 6
Microbial Growth
© 2013 Pearson Education, Inc.
Lectures prepared by Christine L. Case
*
© 2013 Pearson Education, Inc.
© 2013 Pearson Education, Inc.
Microbial GrowthIncrease in number of cells, not cell
sizePopulationsColonies
*
© 2013 Pearson Education, Inc.
The Requirements for GrowthPhysical
requirementsTemperaturepHOsmotic pressureChemical
requirementsCarbonNitrogen, sulfur, and phosphorousTrace
elementsOxygenOrganic growth factor
*
© 2013 Pearson Education, Inc.
Physical RequirementsTemperatureMinimum growth
temperatureOptimum growth temperatureMaximum growth
temperature
*
© 2013 Pearson Education, Inc.
Figure 6.1 Typical growth rates of different types of
microorganisms in response to temperature.
Psychrophiles
Psychrotrophs
Mesophiles
Thermophiles
Hyperthermophiles
© 2013 Pearson Education, Inc.
Applications of Microbiology 6.1 A white microbial biofilm is
visible on this deep-sea hydrothermal vent. Water is being
emitted through the ocean floor at temperatures above 100°C.
© 2013 Pearson Education, Inc.
PsychrotrophsGrow between 0°C and 20–30°CCause food
spoilage
*
© 2013 Pearson Education, Inc.
Figure 6.2 Food preservation temperatures.
Temperatures in this range destroy most microbes,
although lower temperatures take more time.
Very slow bacterial growth.
Rapid growth of bacteria; some may produce toxins.
Many bacteria survive; some may grow.
Refrigerator temperatures; may allow slow growth
of spoilage bacteria, very few pathogens.
No significant growth below freezing.
Danger zone
© 2013 Pearson Education, Inc.
Figure 6.3 The effect of the amount of food on its cooling rate
in a refrigerator and its chance of spoilage.
Refrigerator air
5 cm (2′′) deep
15 cm (6′′) deep
Approximate temperature
range at which Bacillus cereus multiplies in rice
© 2013 Pearson Education, Inc.
pHMost bacteria grow between pH 6.5 and 7.5Molds and yeasts
grow between pH 5 and 6Acidophiles grow in acidic
environments
*
© 2013 Pearson Education, Inc.
Osmotic PressureHypertonic environments, or an increase in
salt or sugar, cause plasmolysisExtreme or obligate halophiles
require high osmotic pressureFacultative halophiles tolerate
high osmotic pressure
*
© 2013 Pearson Education, Inc.
Figure 6.4 Plasmolysis.
Plasma
membrane
Cell wall
Cytoplasm
H2O
NaCl 10%
Cytoplasm
Plasma
membrane
Cell in isotonic solution.
Plasmolyzed cell in hypertonic solution.
NaCl 0.85%
© 2013 Pearson Education, Inc.
Chemical RequirementsCarbonStructural organic molecules,
energy sourceChemoheterotrophs use organic carbon
sourcesAutotrophs use CO2
*
© 2013 Pearson Education, Inc.
Chemical RequirementsNitrogenIn amino acids and
proteinsMost bacteria decompose proteinsSome bacteria use
NH4+ or NO3–A few bacteria use N2 in nitrogen fixation
*
© 2013 Pearson Education, Inc.
Chemical RequirementsSulfurIn amino acids, thiamine, and
biotinMost bacteria decompose proteinsSome bacteria use
SO42– or H2SPhosphorus In DNA, RNA, ATP, and
membranesPO43– is a source of phosphorus
*
© 2013 Pearson Education, Inc.
Chemical RequirementsTrace elementsInorganic elements
required in small amountsUsually as enzyme cofactors
*
© 2013 Pearson Education, Inc.
Table 6.1 The Effect of Oxygen on the Growth of Various Types
of Bacteria
© 2013 Pearson Education, Inc.
Singlet oxygen: 1O2− boosted to a higher-energy
stateSuperoxide free radicals: O2
Peroxide anion: O22–
Hydroxyl radical (OH•)
Toxic Oxygen
Superoxide dismutase
O2 + O2 + 2 H+
H2O2 + O2
Catalase
2 H2O2
2 H2O + O2
Peroxidase
H2O2 + 2 H+
2 H2O
*
© 2013 Pearson Education, Inc.
Organic Growth FactorsOrganic compounds obtained from the
environmentVitamins, amino acids, purines, and pyrimidines
*
© 2013 Pearson Education, Inc.
BiofilmsMicrobial communitiesForm slime or hydrogelsBacteria
attracted by chemicals via quorum sensing
*
© 2013 Pearson Education, Inc.
Figure 6.5 Biofilms.
Clumps of bacteria adhering to surface
Surface
Water currents
Migrating clump of bacteria
© 2013 Pearson Education, Inc.
BiofilmsShare nutrientsSheltered from harmful factors
*
© 2013 Pearson Education, Inc.
Applications of Microbiology 3.2 Pseudomonas aeruginosa
biofilm.
© 2013 Pearson Education, Inc.
© 2013 Pearson Education, Inc.
BiofilmsPatients with indwelling catheters received
contaminated heparinBacterial numbers in contaminated heparin
were too low to cause infection84–421 days after exposure,
patients developed infections
*
© 2013 Pearson Education, Inc.
Culture MediaCulture medium: nutrients prepared for microbial
growthSterile: no living microbesInoculum: microbes being
introduced into mediumInoculation: the process of introducing
microbes into a mediumCulture: microbes growing in/on culture
medium
*
© 2013 Pearson Education, Inc.
AgarComplex polysaccharide Used as solidifying agent for
culture media in Petri plates, slants, and deepsGenerally not
metabolized by microbesLiquefies at 100°CSolidifies at ~40°C
*
© 2013 Pearson Education, Inc.
Culture MediaChemically defined media: exact chemical
composition is knownComplex media: extracts and digests of
yeasts, meat, or plantsNutrient brothNutrient agar
*
© 2013 Pearson Education, Inc.
Table 6.2 A Chemically Defined Medium for Growing a Typical
Chemoheterotroph, Such as Escherichia coli
© 2013 Pearson Education, Inc.
Table 6.3 Defined Culture Medium for Leuconostoc
mesenteroides
© 2013 Pearson Education, Inc.
Table 6.4 Composition of Nutrient Agar, a Complex Medium for
the Growth of Heterotrophic Bacteria
© 2013 Pearson Education, Inc.
Anaerobic Culture MethodsReducing mediaContain chemicals
(thioglycolate or oxyrase) that
combine O2Heated to drive off O2
*
© 2013 Pearson Education, Inc.
Figure 6.6 A jar for cultivating anaerobic bacteria on Petri
plates.
Lid with
O-ring gasket
Envelope containing sodium bicarbonate and sodium
borohydride
Anaerobic indicator (methylene blue)
Petri plates
Clamp with clamp screw
Palladium catalyst pellets
© 2013 Pearson Education, Inc.
Figure 6.7 An anaerobic chamber.
Arm ports
Air
lock
© 2013 Pearson Education, Inc.
CapnophilesMicrobes that require high CO2 conditionsCO2
packetCandle jar
*
© 2013 Pearson Education, Inc.
BSL-1: no special precautionsBSL-2: lab coat, gloves, eye
protectionBSL-3: biosafety cabinets to prevent airborne
transmissionBSL-4: sealed, negative pressureExhaust air is
filtered twice
Biosafety Levels
*
© 2013 Pearson Education, Inc.
Figure 6.8 Technicians in a biosafety level 4 (BSL-4)
laboratory.
© 2013 Pearson Education, Inc.
Make it easy to distinguish colonies of different microbes
Differential Media
*
© 2013 Pearson Education, Inc.
Figure 6.9 Blood agar, a differential medium containing red
blood cells.
Bacterial colonies
Hemolysis
© 2013 Pearson Education, Inc.
Suppress unwanted microbes and encourage desired microbes
Selective Media
*
© 2013 Pearson Education, Inc.
Figure 6.10 Differential medium.
Uninoculated
Staphylococcus
epidermis
Staphylococcus
aureus
© 2013 Pearson Education, Inc.
Enrichment CultureEncourages growth of desired
microbeAssume a soil sample contains a few phenol-
degrading bacteria and thousands of
other bacteriaInoculate phenol-containing culture medium with
the soil, and incubateTransfer 1 ml to another flask of the
phenol medium, and incubateTransfer 1 ml to another flask of
the phenol medium, and incubateOnly phenol-metabolizing
bacteria will be growing
*
© 2013 Pearson Education, Inc.
Obtaining Pure CulturesA pure culture contains only one
species or strainA colony is a population of cells arising from a
single cell or spore or from a group of attached cellsA colony is
often called a colony-forming unit (CFU)The streak plate
method is used to isolate pure cultures
*
© 2013 Pearson Education, Inc.
Figure 6.11 The streak plate method for isolating pure bacterial
cultures.
Colonies
1
2
3
© 2013 Pearson Education, Inc.
Preserving Bacterial CulturesDeep-freezing: –50° to –
95°CLyophilization (freeze-drying): frozen
(–54° to –72°C) and dehydrated in a vacuum
*
© 2013 Pearson Education, Inc.
Binary fissionBuddingConidiospores
(actinomycetes)Fragmentation of filaments
ANIMATION Bacterial Growth: Overview
Reproduction in Prokaryotes
*
© 2013 Pearson Education, Inc.
Figure 6.12a Binary fission in bacteria.
Cell elongates and DNA is replicated.
Cell wall and plasma membrane begin to constrict.
Cross-wall forms, completely separating the two DNA copies.
Cells separate.
Cell wall
Plasma membrane
DNA (nucleoid)
(a) A diagram of the sequence of cell division
© 2013 Pearson Education, Inc.
Figure 6.12b Binary fission in bacteria.
(b) A thin section of a cell of Bacillus licheniformis starting to
divide
Cell wall
DNA (nucleoid)
Partially formed cross-wall
© 2013 Pearson Education, Inc.
© 2013 Pearson Education, Inc.
Figure 6.13a Cell division.
© 2013 Pearson Education, Inc.
Figure 6.13b Cell division.
© 2013 Pearson Education, Inc.
If 100 cells growing for 5 hours produced
1,720,320 cells:
ANIMATION Binary Fission
Generation Time
Number of generations =
Log number of cells (end) − Log number of cells (beginning)
0.301
60 min × hours
Number of generations
Generation time =
= 21 minutes/generation
*
© 2013 Pearson Education, Inc.
Figure 6.14 A growth curve for an exponentially increasing
population, plotted logarithmically (dashed line) and
arithmetically (solid line).
Log10 = 1.51
Log10 = 3.01
Log10 = 4.52
Log10 = 6.02
(1,048,576)
Generations
Log10 of number of cells
Number of cells
(32)
(1024)
(32,768)
(65,536)
(131,072)
(262,144)
(524,288)
© 2013 Pearson Education, Inc.
Lag Phase
Intense activity preparing for population growth, but no
increase in population.
Log Phase
Logarithmic, or exponential, increase in population.
Stationary Phase
Period of equilibrium; microbial deaths balance production of
new cells.
Death Phase
Population Is decreasing at a logarithmic rate.
The logarithmic growth in the log phase is due to reproduction
by binary fission (bacteria) or mitosis (yeast).
Figure 6.15 Understanding the Bacterial Growth Curve.
Staphylococcus spp.
© 2013 Pearson Education, Inc.
Figure 6.16 Serial dilutions and plate counts.
Original inoculum
1 ml
1 ml
1 ml
1 ml
1 ml
9 m broth
in each tube
Dilutions
1:10
1:100
1:1000
1:10,000
1:100,000
1 ml
1 ml
1 ml
1 ml
1 ml
1:10
1:100
1:1000
1:10,000
1:100,000
(10-1)
(10-2)
(10-3)
(10-4)
(10-5)
Plating
Calculation: Number of colonies on plate × reciprocal of
dilution of sample = number of bacteria/ml
(For example, if 54 colonies are on a plate of 1:1000 dilution,
then the count is 54 × 1000 = 54,000 bacteria/ml in sample.)
© 2013 Pearson Education, Inc.
After incubation, count colonies on plates that have
25–250 colonies (CFUs)
Plate Counts
*
© 2013 Pearson Education, Inc.
Figure 6.17 Methods of preparing plates for plate counts.
The pour plate method
The spread plate method
Inoculate empty plate.
Add melted nutrient agar.
Swirl to mix.
Colonies grow on and in solidified medium.
1.0 or 0.1 ml
0.1 ml
Bacterial dilution
Inoculate plate containing solid medium.
Spread inoculum over surface evenly.
Colonies grow only on surface of medium.
© 2013 Pearson Education, Inc.
Figure 6.18 Counting bacteria by filtration.
© 2013 Pearson Education, Inc.
Multiple tube MPN testCount positive tubes
Most Probable Number
*
© 2013 Pearson Education, Inc.
Figure 6.19a The most probable number (MPN) method.
Volume of Inoculum for Each Set of Five Tubes
(a) Most probable number (MPN) dilution series.
© 2013 Pearson Education, Inc.
Compare with a statistical table
Most Probable Number
*
© 2013 Pearson Education, Inc.
Figure 6.19b The most probable number (MPN) method.
(b) MPN table.
© 2013 Pearson Education, Inc.
Figure 6.20 Direct microscopic count of bacteria with a Petroff-
Hausser cell counter.
Grid with 25 large squares
Cover glass
Slide
Bacterial suspension is added here and fills the shallow volume
over the squares by capillary action.
Bacterial suspension
Cover glass
Slide
Cross section of a cell counter.
The depth under the cover glass and the area of the squares are
known, so the volume of the bacterial suspension over the
squares can be calculated (depth × area).
Microscopic count: All cells in several large squares are
counted, and the numbers are averaged. The large square shown
here has 14 bacterial cells.
The volume of fluid over the
large square is 1/1,250,000
of a milliliter. If it contains 14 cells, as shown here, then
there are 14 × 1,250,000 = 17,500,000 cells in a milliliter.
Location of squares
© 2013 Pearson Education, Inc.
Direct Microscopic Count
Number of bacteria/ml =
Number of cells counted
Volume of area counted
14
8 × 10−7
= 17,500,000
*
© 2013 Pearson Education, Inc.
Figure 6.21 Turbidity estimation of bacterial numbers.
Light source
Light
Blank
Spectrophotometer
Light-sensitive detector
Scattered light that does not reach detector
Bacterial suspension
© 2013 Pearson Education, Inc.
Measuring Microbial Growth
Direct MethodsPlate countsFiltrationMPNDirect microscopic
count
Indirect MethodsTurbidityMetabolic activityDry weight
*
Chapter 12 Review
Vocabulary
1. Arthropods
2. Helminthes
3. Fungi
4. Algae
5. Protozoa
6. Hyphae
7. Thallus
8. Mycology
9. Eukaryotic
10. Sterols
11. Endospores
12. Vegetative
13. Septa
14. Mold
15. Mycelium
16. Yeast
17. Aerial hyphae
18. Dimorphism
19. Fission yeast
20. Sexual spores
21. Asexual spores
22. Conidiospores
23. Conidia
24. Conidiophore
25. Arthroconidia
26. Blastoconidia
27. Sporangiospore
28. Plasmogamy
29. Karyogamy
30. Meiosis
31. Aerobic
32. Anaerobic
33. Mycosis
34. Systemic mycoses
35. Subcutaneous mycoses
36. Dermatophytes
37. Cutaneous mycoses
38. Superficial mycoses
39. Opportunistic pathogen
40. List three positive effects of fungus
41. List three negative effects of fungus
42. Lichen
43. Unicellular
44. Multicellular
45. Flagella
46. Schizogony
47. Conjugation
48. Gametes
49. Encystment
50. Oocyst
51. Cystotome
52. Vacuoles
53. Anal pore
54. Hemoflagellates
55. Amebae
56. Pseudopods
57. Ciliates
58. Slime mold
59. Cytoplasmic streaming
60. Larval stage
61. Diocious
62. Monoecious
63. Flatworm
64. Fluke
65. Tapeworm
66. roundworms
67. Intermediate host
68. Definitive host
69. Scolex
70. Proglottids
71. Cysticerci
72. Hydatid cyst
73. Spicules
74. Sexual dimorphism
75. Vector
Chapter 11 Summary
You are required to know all of the vocabulary listed in the list,
all concepts in red and the general characteristics of all the
organisms in red.
Vocabulary:
1. Oxygenic
2. Budding
3. Anoxyhenic
4. Host
5. Anaerobic
6. Prosthecae
7. Aerobic
8. Coccus
9. Facultative anaerobes
10. Gram positive
11. Septicemia
12. Gram negative
13. Opportunistic
14. Coccobacillus
15. Pathogen
16. Fermentation
17. Obligate
18. Endosymbiosis
19. Parasite
20. Heterotrophs
21. Autotrophs
22. Enterics
23. Photoautotrophs
24. Elementary bodies
25. Chemoheterotrophs
26. Heterocysts
27. Flagella
28. Glycocalyx
29. Peritrichous
30. Morphology
31. Reticulate body
32. Axial filament
33. Endospore
34. Filamentous
35. Pleomorphic
36. Dimorphic
37. Acid-fast stain
38. Motile
Prokaryotes
· Daomains
· Archaea (know the definition of each of these terms)
· Hyperthermophiles
· Halophyles
· Thermophiles
· Methanogens
· Bacteria (know what each of these classifications entails)
· Gram Positive
· Gram Negative
_____________________________________________________
_____________________________
BACTERIA
· Humana pathogens
· Obligate intracellular parasites (ICP)- (know what it means to
be an ICP)
· Cause Spotted Fevers
· Ricketsia
· Does NOT cause Spotted Fevers
· Erlichia
· Survive in phagocytes (WBC’s) but not ICP
· Brucella
· Do not Survive in phagocytes (WBC’s) but not ICP
· Bartonella
· Those that live in insects
· Wolbochia
· Do not live in insects
· Have prosthecae (stalks)
· Cellular appendages that are neither pili nor flagella, as they
are extensions of the cellular membrane and contain cytosol.
One notable group of prosthecates is the genus Caulobacter.
· Hyphomicrobium
·
Gram Negative Bacteria
· Proteobacteria
· Largest taxonomic group of bacteria
· Includes most of the G(-) bacteria
· Separated into 5 classes
· Alphaproteobacteria
· Rickettsia
· Ehrlichia
· Rhizobium
· Caulobacter
· Bortanella
· Brucella
· Wolbachia
· Betaproteobacteria
· Spirillum
· Burkholderia
· Bortadella
· Sphaerotilus
· Gammaproteobacteria
· Pseudomonadales
· Moraxella
· Legionalla
· Coxiella
· Vibrio
· Enterics
· Salmonella
· Escherichia
· Shigella
· Serratia
· Klebsiella
· Yersenia
· Erwinia
· Proteus
· Enterobacter
· Pasteuralles
· Pasteurella
· Haemophilus
· Deltaproteobacteria
· Desulfovibrionales
· Myxococcales
· Epsilonproteobacteria
· Campylobacter
· Helicobacter
· Nonproteobacteria
· Cyanobacteria
· Anoxygenic Bacteria
· Chlamydiae
· Planctomycetes
· Bacteroidetes
· Fusobacteria
· Spirochetes
· Treponema
· Borrelia
· Leptospira
· Deinococci
Gram Positive Bacteria
· Firmicutes
· Clostridiales
· Epulopiscium
· Bacillales
· Bacillus
· Staphylococcus
· Lactobacillales
· Lactobacillus
· Streptococcus
· Enterococcus
· Listeria
· Mycoplasmatales
· Mycoplasma
· Mycoplasma pneumonia
· Actinobacteria (High G+C)
· Mycobacterium
· Corynebacteruium
· Propionibacterium
· Gardenerella
· Frankia
· Streptomyces
· Actinomyces
· Nocardia
Domain Archaea (know the generalities of the domain)
· Extremophiles
· Thermophiles
· Methanogens
· Hyperthermophiles
· Halophiles

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Copyright © 2013 Pearson Education, Inc.Lectures prepared .docx

  • 1. Copyright © 2013 Pearson Education, Inc. Lectures prepared by Christine L. Case Chapter 6 Microbial Growth © 2013 Pearson Education, Inc. Lectures prepared by Christine L. Case * © 2013 Pearson Education, Inc. © 2013 Pearson Education, Inc. Microbial GrowthIncrease in number of cells, not cell sizePopulationsColonies * © 2013 Pearson Education, Inc.
  • 2. The Requirements for GrowthPhysical requirementsTemperaturepHOsmotic pressureChemical requirementsCarbonNitrogen, sulfur, and phosphorousTrace elementsOxygenOrganic growth factor * © 2013 Pearson Education, Inc. Physical RequirementsTemperatureMinimum growth temperatureOptimum growth temperatureMaximum growth temperature * © 2013 Pearson Education, Inc. Figure 6.1 Typical growth rates of different types of microorganisms in response to temperature. Psychrophiles Psychrotrophs Mesophiles Thermophiles Hyperthermophiles © 2013 Pearson Education, Inc. Applications of Microbiology 6.1 A white microbial biofilm is
  • 3. visible on this deep-sea hydrothermal vent. Water is being emitted through the ocean floor at temperatures above 100°C. © 2013 Pearson Education, Inc. PsychrotrophsGrow between 0°C and 20–30°CCause food spoilage * © 2013 Pearson Education, Inc. Figure 6.2 Food preservation temperatures. Temperatures in this range destroy most microbes, although lower temperatures take more time. Very slow bacterial growth. Rapid growth of bacteria; some may produce toxins. Many bacteria survive; some may grow. Refrigerator temperatures; may allow slow growth of spoilage bacteria, very few pathogens. No significant growth below freezing. Danger zone © 2013 Pearson Education, Inc. Figure 6.3 The effect of the amount of food on its cooling rate in a refrigerator and its chance of spoilage. Refrigerator air 5 cm (2′′) deep 15 cm (6′′) deep Approximate temperature
  • 4. range at which Bacillus cereus multiplies in rice © 2013 Pearson Education, Inc. pHMost bacteria grow between pH 6.5 and 7.5Molds and yeasts grow between pH 5 and 6Acidophiles grow in acidic environments * © 2013 Pearson Education, Inc. Osmotic PressureHypertonic environments, or an increase in salt or sugar, cause plasmolysisExtreme or obligate halophiles require high osmotic pressureFacultative halophiles tolerate high osmotic pressure * © 2013 Pearson Education, Inc. Figure 6.4 Plasmolysis. Plasma membrane Cell wall Cytoplasm H2O NaCl 10%
  • 5. Cytoplasm Plasma membrane Cell in isotonic solution. Plasmolyzed cell in hypertonic solution. NaCl 0.85% © 2013 Pearson Education, Inc. Chemical RequirementsCarbonStructural organic molecules, energy sourceChemoheterotrophs use organic carbon sourcesAutotrophs use CO2 * © 2013 Pearson Education, Inc. Chemical RequirementsNitrogenIn amino acids and proteinsMost bacteria decompose proteinsSome bacteria use NH4+ or NO3–A few bacteria use N2 in nitrogen fixation * © 2013 Pearson Education, Inc. Chemical RequirementsSulfurIn amino acids, thiamine, and biotinMost bacteria decompose proteinsSome bacteria use SO42– or H2SPhosphorus In DNA, RNA, ATP, and membranesPO43– is a source of phosphorus
  • 6. * © 2013 Pearson Education, Inc. Chemical RequirementsTrace elementsInorganic elements required in small amountsUsually as enzyme cofactors * © 2013 Pearson Education, Inc. Table 6.1 The Effect of Oxygen on the Growth of Various Types of Bacteria © 2013 Pearson Education, Inc. Singlet oxygen: 1O2− boosted to a higher-energy stateSuperoxide free radicals: O2 Peroxide anion: O22– Hydroxyl radical (OH•) Toxic Oxygen Superoxide dismutase
  • 7. O2 + O2 + 2 H+ H2O2 + O2 Catalase 2 H2O2 2 H2O + O2 Peroxidase H2O2 + 2 H+ 2 H2O * © 2013 Pearson Education, Inc. Organic Growth FactorsOrganic compounds obtained from the environmentVitamins, amino acids, purines, and pyrimidines * © 2013 Pearson Education, Inc. BiofilmsMicrobial communitiesForm slime or hydrogelsBacteria attracted by chemicals via quorum sensing
  • 8. * © 2013 Pearson Education, Inc. Figure 6.5 Biofilms. Clumps of bacteria adhering to surface Surface Water currents Migrating clump of bacteria © 2013 Pearson Education, Inc. BiofilmsShare nutrientsSheltered from harmful factors * © 2013 Pearson Education, Inc. Applications of Microbiology 3.2 Pseudomonas aeruginosa biofilm. © 2013 Pearson Education, Inc. © 2013 Pearson Education, Inc. BiofilmsPatients with indwelling catheters received contaminated heparinBacterial numbers in contaminated heparin were too low to cause infection84–421 days after exposure, patients developed infections
  • 9. * © 2013 Pearson Education, Inc. Culture MediaCulture medium: nutrients prepared for microbial growthSterile: no living microbesInoculum: microbes being introduced into mediumInoculation: the process of introducing microbes into a mediumCulture: microbes growing in/on culture medium * © 2013 Pearson Education, Inc. AgarComplex polysaccharide Used as solidifying agent for culture media in Petri plates, slants, and deepsGenerally not metabolized by microbesLiquefies at 100°CSolidifies at ~40°C * © 2013 Pearson Education, Inc. Culture MediaChemically defined media: exact chemical composition is knownComplex media: extracts and digests of yeasts, meat, or plantsNutrient brothNutrient agar
  • 10. * © 2013 Pearson Education, Inc. Table 6.2 A Chemically Defined Medium for Growing a Typical Chemoheterotroph, Such as Escherichia coli © 2013 Pearson Education, Inc. Table 6.3 Defined Culture Medium for Leuconostoc mesenteroides © 2013 Pearson Education, Inc. Table 6.4 Composition of Nutrient Agar, a Complex Medium for the Growth of Heterotrophic Bacteria © 2013 Pearson Education, Inc. Anaerobic Culture MethodsReducing mediaContain chemicals (thioglycolate or oxyrase) that combine O2Heated to drive off O2 * © 2013 Pearson Education, Inc.
  • 11. Figure 6.6 A jar for cultivating anaerobic bacteria on Petri plates. Lid with O-ring gasket Envelope containing sodium bicarbonate and sodium borohydride Anaerobic indicator (methylene blue) Petri plates Clamp with clamp screw Palladium catalyst pellets © 2013 Pearson Education, Inc. Figure 6.7 An anaerobic chamber. Arm ports Air lock © 2013 Pearson Education, Inc. CapnophilesMicrobes that require high CO2 conditionsCO2 packetCandle jar * © 2013 Pearson Education, Inc. BSL-1: no special precautionsBSL-2: lab coat, gloves, eye protectionBSL-3: biosafety cabinets to prevent airborne transmissionBSL-4: sealed, negative pressureExhaust air is filtered twice
  • 12. Biosafety Levels * © 2013 Pearson Education, Inc. Figure 6.8 Technicians in a biosafety level 4 (BSL-4) laboratory. © 2013 Pearson Education, Inc. Make it easy to distinguish colonies of different microbes Differential Media * © 2013 Pearson Education, Inc. Figure 6.9 Blood agar, a differential medium containing red blood cells. Bacterial colonies Hemolysis © 2013 Pearson Education, Inc. Suppress unwanted microbes and encourage desired microbes Selective Media
  • 13. * © 2013 Pearson Education, Inc. Figure 6.10 Differential medium. Uninoculated Staphylococcus epidermis Staphylococcus aureus © 2013 Pearson Education, Inc. Enrichment CultureEncourages growth of desired microbeAssume a soil sample contains a few phenol- degrading bacteria and thousands of other bacteriaInoculate phenol-containing culture medium with the soil, and incubateTransfer 1 ml to another flask of the phenol medium, and incubateTransfer 1 ml to another flask of the phenol medium, and incubateOnly phenol-metabolizing bacteria will be growing * © 2013 Pearson Education, Inc. Obtaining Pure CulturesA pure culture contains only one species or strainA colony is a population of cells arising from a single cell or spore or from a group of attached cellsA colony is often called a colony-forming unit (CFU)The streak plate
  • 14. method is used to isolate pure cultures * © 2013 Pearson Education, Inc. Figure 6.11 The streak plate method for isolating pure bacterial cultures. Colonies 1 2 3 © 2013 Pearson Education, Inc. Preserving Bacterial CulturesDeep-freezing: –50° to – 95°CLyophilization (freeze-drying): frozen (–54° to –72°C) and dehydrated in a vacuum * © 2013 Pearson Education, Inc. Binary fissionBuddingConidiospores (actinomycetes)Fragmentation of filaments ANIMATION Bacterial Growth: Overview Reproduction in Prokaryotes
  • 15. * © 2013 Pearson Education, Inc. Figure 6.12a Binary fission in bacteria. Cell elongates and DNA is replicated. Cell wall and plasma membrane begin to constrict. Cross-wall forms, completely separating the two DNA copies. Cells separate. Cell wall Plasma membrane DNA (nucleoid) (a) A diagram of the sequence of cell division © 2013 Pearson Education, Inc. Figure 6.12b Binary fission in bacteria. (b) A thin section of a cell of Bacillus licheniformis starting to divide Cell wall DNA (nucleoid) Partially formed cross-wall © 2013 Pearson Education, Inc. © 2013 Pearson Education, Inc. Figure 6.13a Cell division. © 2013 Pearson Education, Inc.
  • 16. Figure 6.13b Cell division. © 2013 Pearson Education, Inc. If 100 cells growing for 5 hours produced 1,720,320 cells: ANIMATION Binary Fission Generation Time Number of generations = Log number of cells (end) − Log number of cells (beginning) 0.301 60 min × hours Number of generations Generation time = = 21 minutes/generation * © 2013 Pearson Education, Inc. Figure 6.14 A growth curve for an exponentially increasing population, plotted logarithmically (dashed line) and arithmetically (solid line). Log10 = 1.51 Log10 = 3.01 Log10 = 4.52 Log10 = 6.02 (1,048,576) Generations
  • 17. Log10 of number of cells Number of cells (32) (1024) (32,768) (65,536) (131,072) (262,144) (524,288) © 2013 Pearson Education, Inc. Lag Phase Intense activity preparing for population growth, but no increase in population. Log Phase Logarithmic, or exponential, increase in population. Stationary Phase Period of equilibrium; microbial deaths balance production of new cells. Death Phase Population Is decreasing at a logarithmic rate. The logarithmic growth in the log phase is due to reproduction by binary fission (bacteria) or mitosis (yeast). Figure 6.15 Understanding the Bacterial Growth Curve. Staphylococcus spp. © 2013 Pearson Education, Inc. Figure 6.16 Serial dilutions and plate counts. Original inoculum 1 ml 1 ml 1 ml
  • 18. 1 ml 1 ml 9 m broth in each tube Dilutions 1:10 1:100 1:1000 1:10,000 1:100,000 1 ml 1 ml 1 ml 1 ml 1 ml 1:10 1:100 1:1000 1:10,000 1:100,000 (10-1) (10-2) (10-3) (10-4) (10-5) Plating Calculation: Number of colonies on plate × reciprocal of dilution of sample = number of bacteria/ml (For example, if 54 colonies are on a plate of 1:1000 dilution, then the count is 54 × 1000 = 54,000 bacteria/ml in sample.) © 2013 Pearson Education, Inc. After incubation, count colonies on plates that have 25–250 colonies (CFUs)
  • 19. Plate Counts * © 2013 Pearson Education, Inc. Figure 6.17 Methods of preparing plates for plate counts. The pour plate method The spread plate method Inoculate empty plate. Add melted nutrient agar. Swirl to mix. Colonies grow on and in solidified medium. 1.0 or 0.1 ml 0.1 ml Bacterial dilution Inoculate plate containing solid medium. Spread inoculum over surface evenly. Colonies grow only on surface of medium. © 2013 Pearson Education, Inc. Figure 6.18 Counting bacteria by filtration. © 2013 Pearson Education, Inc. Multiple tube MPN testCount positive tubes Most Probable Number *
  • 20. © 2013 Pearson Education, Inc. Figure 6.19a The most probable number (MPN) method. Volume of Inoculum for Each Set of Five Tubes (a) Most probable number (MPN) dilution series. © 2013 Pearson Education, Inc. Compare with a statistical table Most Probable Number * © 2013 Pearson Education, Inc. Figure 6.19b The most probable number (MPN) method. (b) MPN table. © 2013 Pearson Education, Inc. Figure 6.20 Direct microscopic count of bacteria with a Petroff- Hausser cell counter. Grid with 25 large squares Cover glass Slide Bacterial suspension is added here and fills the shallow volume over the squares by capillary action. Bacterial suspension Cover glass Slide
  • 21. Cross section of a cell counter. The depth under the cover glass and the area of the squares are known, so the volume of the bacterial suspension over the squares can be calculated (depth × area). Microscopic count: All cells in several large squares are counted, and the numbers are averaged. The large square shown here has 14 bacterial cells. The volume of fluid over the large square is 1/1,250,000 of a milliliter. If it contains 14 cells, as shown here, then there are 14 × 1,250,000 = 17,500,000 cells in a milliliter. Location of squares © 2013 Pearson Education, Inc. Direct Microscopic Count Number of bacteria/ml = Number of cells counted Volume of area counted 14 8 × 10−7 = 17,500,000 * © 2013 Pearson Education, Inc. Figure 6.21 Turbidity estimation of bacterial numbers. Light source Light
  • 22. Blank Spectrophotometer Light-sensitive detector Scattered light that does not reach detector Bacterial suspension © 2013 Pearson Education, Inc. Measuring Microbial Growth Direct MethodsPlate countsFiltrationMPNDirect microscopic count Indirect MethodsTurbidityMetabolic activityDry weight * Chapter 12 Review Vocabulary 1. Arthropods 2. Helminthes 3. Fungi 4. Algae 5. Protozoa 6. Hyphae 7. Thallus 8. Mycology 9. Eukaryotic 10. Sterols 11. Endospores 12. Vegetative 13. Septa 14. Mold 15. Mycelium 16. Yeast
  • 23. 17. Aerial hyphae 18. Dimorphism 19. Fission yeast 20. Sexual spores 21. Asexual spores 22. Conidiospores 23. Conidia 24. Conidiophore 25. Arthroconidia 26. Blastoconidia 27. Sporangiospore 28. Plasmogamy 29. Karyogamy 30. Meiosis 31. Aerobic 32. Anaerobic 33. Mycosis 34. Systemic mycoses 35. Subcutaneous mycoses 36. Dermatophytes 37. Cutaneous mycoses 38. Superficial mycoses 39. Opportunistic pathogen 40. List three positive effects of fungus 41. List three negative effects of fungus 42. Lichen 43. Unicellular 44. Multicellular 45. Flagella 46. Schizogony 47. Conjugation 48. Gametes 49. Encystment 50. Oocyst 51. Cystotome 52. Vacuoles
  • 24. 53. Anal pore 54. Hemoflagellates 55. Amebae 56. Pseudopods 57. Ciliates 58. Slime mold 59. Cytoplasmic streaming 60. Larval stage 61. Diocious 62. Monoecious 63. Flatworm 64. Fluke 65. Tapeworm 66. roundworms 67. Intermediate host 68. Definitive host 69. Scolex 70. Proglottids 71. Cysticerci 72. Hydatid cyst 73. Spicules 74. Sexual dimorphism 75. Vector Chapter 11 Summary You are required to know all of the vocabulary listed in the list, all concepts in red and the general characteristics of all the organisms in red. Vocabulary: 1. Oxygenic 2. Budding 3. Anoxyhenic 4. Host 5. Anaerobic 6. Prosthecae
  • 25. 7. Aerobic 8. Coccus 9. Facultative anaerobes 10. Gram positive 11. Septicemia 12. Gram negative 13. Opportunistic 14. Coccobacillus 15. Pathogen 16. Fermentation 17. Obligate 18. Endosymbiosis 19. Parasite 20. Heterotrophs 21. Autotrophs 22. Enterics 23. Photoautotrophs 24. Elementary bodies 25. Chemoheterotrophs 26. Heterocysts 27. Flagella 28. Glycocalyx 29. Peritrichous 30. Morphology 31. Reticulate body 32. Axial filament 33. Endospore 34. Filamentous 35. Pleomorphic 36. Dimorphic 37. Acid-fast stain 38. Motile Prokaryotes · Daomains · Archaea (know the definition of each of these terms)
  • 26. · Hyperthermophiles · Halophyles · Thermophiles · Methanogens · Bacteria (know what each of these classifications entails) · Gram Positive · Gram Negative _____________________________________________________ _____________________________ BACTERIA · Humana pathogens · Obligate intracellular parasites (ICP)- (know what it means to be an ICP) · Cause Spotted Fevers · Ricketsia · Does NOT cause Spotted Fevers · Erlichia · Survive in phagocytes (WBC’s) but not ICP · Brucella · Do not Survive in phagocytes (WBC’s) but not ICP · Bartonella · Those that live in insects · Wolbochia · Do not live in insects · Have prosthecae (stalks) · Cellular appendages that are neither pili nor flagella, as they are extensions of the cellular membrane and contain cytosol. One notable group of prosthecates is the genus Caulobacter. · Hyphomicrobium · Gram Negative Bacteria · Proteobacteria · Largest taxonomic group of bacteria · Includes most of the G(-) bacteria · Separated into 5 classes · Alphaproteobacteria
  • 27. · Rickettsia · Ehrlichia · Rhizobium · Caulobacter · Bortanella · Brucella · Wolbachia · Betaproteobacteria · Spirillum · Burkholderia · Bortadella · Sphaerotilus · Gammaproteobacteria · Pseudomonadales · Moraxella · Legionalla · Coxiella · Vibrio · Enterics · Salmonella · Escherichia · Shigella · Serratia · Klebsiella · Yersenia · Erwinia · Proteus · Enterobacter · Pasteuralles · Pasteurella · Haemophilus · Deltaproteobacteria · Desulfovibrionales · Myxococcales · Epsilonproteobacteria · Campylobacter
  • 28. · Helicobacter · Nonproteobacteria · Cyanobacteria · Anoxygenic Bacteria · Chlamydiae · Planctomycetes · Bacteroidetes · Fusobacteria · Spirochetes · Treponema · Borrelia · Leptospira · Deinococci Gram Positive Bacteria · Firmicutes · Clostridiales · Epulopiscium · Bacillales · Bacillus · Staphylococcus · Lactobacillales · Lactobacillus · Streptococcus · Enterococcus · Listeria · Mycoplasmatales · Mycoplasma · Mycoplasma pneumonia · Actinobacteria (High G+C) · Mycobacterium · Corynebacteruium · Propionibacterium · Gardenerella · Frankia · Streptomyces
  • 29. · Actinomyces · Nocardia Domain Archaea (know the generalities of the domain) · Extremophiles · Thermophiles · Methanogens · Hyperthermophiles · Halophiles