The FAA emphasizes the importance of a robust flight test program for experimental and amateur-built aircraft, noting that the first 50 hours are particularly dangerous due to the challenges of handling unfamiliar aircraft. They recommend following a detailed flight test plan, as outlined in Advisory Circular 90-89, to ensure safety and identify any performance limitations. The introduction of the Additional Pilot Program aims to enhance safety by allowing homebuilders to include a qualified pilot in the flight testing process.